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Bug 108664 - emerge order does not respect dependencies
Summary: emerge order does not respect dependencies
Status: RESOLVED DUPLICATE of bug 16365
Alias: None
Product: Portage Development
Classification: Unclassified
Component: Core - Dependencies (show other bugs)
Hardware: All Linux
: High critical (vote)
Assignee: Portage team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2005-10-09 14:36 UTC by Denys Duchier
Modified: 2005-10-10 01:54 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


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Description Denys Duchier 2005-10-09 14:36:26 UTC
Lately I have been installing Gentoo on various machines, and I keep running    
into problems that arise because portage does not always emerge packages in    
an order that respects their dependencies.    
   
For example, consider: 
   
% emerge -e x11-libs/qt -ptv   
   
   
These are the packages that I would merge, in reverse order:   
   
Calculating dependencies  .   ...done!   
[ebuild  N    ] dev-db/qt-unixODBC-3.3.4-r1  0 kB    
[ebuild  N    ] net-fs/samba-3.0.20a  -acl -async -automount +cups -doc   
-kerberos +ldap -libclamav +mysql -oav +pam -postgres +python -quotas   
+readline (-selinux) -syslog -winbind -xml +xml2 16,801 kB    
[ebuild  N    ]  dev-libs/popt-1.7-r1  +nls 561 kB    
[ebuild  N    ]  net-nds/openldap-2.2.28-r1  +berkdb +crypt -debug +gdbm +ipv6   
-kerberos -minimal +odbc +perl +readline +samba +sasl +slp +ssl +tcpd 4,565 kB    
[ebuild  N    ]   dev-db/unixODBC-2.2.11-r1  -gnome +qt 2,350 kB    
[ebuild  N    ] dev-perl/DBD-mysql-2.9007  114 kB    
[ebuild  N    ]  dev-perl/DBI-1.48  369 kB    
[ebuild  N    ]   dev-perl/PlRPC-0.2018  17 kB    
[ebuild  N    ]    dev-perl/Net-Daemon-0.38  30 kB    
[ebuild  N    ]    perl-core/Storable-2.13  131 kB    
[ebuild  N    ]   dev-libs/cyrus-sasl-2.1.21-r1  -authdaemond +berkdb +crypt   
+gdbm -java -kerberos +ldap +mysql -ntlm_unsupported_patch +pam -postgres   
-sample -srp +ssl -static -urandom 1,547 kB    
[ebuild  N    ]    dev-db/mysql-4.1.14  +berkdb -big-tables -cluster -debug   
-doc -extraengine -geometry -minimal +perl +readline (-selinux) +ssl -static   
+tcpd -utf8 0 kB    
[ebuild  N    ]     sys-process/procps-3.2.5-r1  (-n32) 270 kB    
[ebuild  N    ]   sys-apps/tcp-wrappers-7.6-r8  +ipv6 115 kB    
[ebuild  N    ] x11-libs/qt-3.3.4-r8  +cups -debug -doc -examples -firebird   
+gif -immqt -immqt-bc +ipv6 +mysql -nas +odbc +opengl -postgres +sqlite   
-xinerama 0 kB    
[ebuild  N    ]  net-print/cups-1.1.23-r4  -cjk -gnutls +nls +pam +samba +slp   
+ssl 0 kB    
[ebuild  N    ]   net-libs/openslp-1.2.1  0 kB    
[ebuild  N    ]   app-text/xpdf-3.01  +X +motif 0 kB    
[ebuild  N    ]    media-libs/t1lib-5.0.2  +X -doc 0 kB    
[ebuild  N    ]    app-text/ghostscript-7.07.1-r10  +X -cjk +cups +emacs +gtk   
0 kB    
[ebuild  N    ]     media-fonts/gnu-gs-fonts-std-8.11  0 kB    
[ebuild  N    ]     x11-libs/gtk+-2.6.10  -doc +jpeg -static +tiff 0 kB    
[ebuild  N    ]      x11-misc/shared-mime-info-0.16  0 kB    
[ebuild  N    ]       dev-libs/libxml2-2.6.22  -debug -doc +ipv6 +python   
+readline -static 0 kB    
[ebuild  N    ]       dev-util/intltool-0.34.1  0 kB    
[ebuild  N    ]        dev-perl/XML-Parser-2.34  0 kB    
[ebuild  N    ]      dev-libs/atk-1.10.3  -debug -doc -static 0 kB    
[ebuild  N    ]      x11-libs/pango-1.8.2  -debug -doc -static 0 kB    
[ebuild  N    ]       dev-libs/glib-2.6.5  -doc -hardened -static 0 kB    
[ebuild  N    ]    x11-libs/openmotif-2.2.3-r7  0 kB    
[ebuild  N    ]     x11-libs/motif-config-0.9  0 kB    
[ebuild  N    ]  media-libs/libmng-1.0.8-r1  0 kB    
[ebuild  N    ]   media-libs/lcms-1.14-r1  +jpeg +python +tiff +zlib 0 kB    
[ebuild  N    ]    media-libs/tiff-3.7.4  +jpeg -nocxx +zlib 0 kB    
[ebuild  N    ] x11-terms/xterm-204  -Xaw3d -toolbar +truetype +unicode 0 kB    
[ebuild  N    ]  sys-apps/utempter-0.5.5.6  0 kB    
[ebuild  N    ]   app-arch/rpm2targz-9.0-r4  0 kB    
[ebuild  N    ]    app-arch/cpio-2.6-r4  +nls 437 kB    
[ebuild  N    ]    sys-apps/which-2.16  122 kB    
[ebuild  N    ]    sys-apps/file-4.15-r1  -build +python 0 kB    
[ebuild  N    ]  x11-base/xorg-x11-6.8.2-r6  -3dfx -3dnow +bitmap-fonts -cjk   
-debug -dlloader -dmx -doc -font-server -insecure-drivers +ipv6 -minimal +mmx   
+nls -nocxx +opengl +pam -sdk +sse -static +truetype-fonts +type1-fonts   
(-uclibc) -xprint +xv 0 kB    
[ebuild  N    ]   media-libs/fontconfig-2.3.2  0 kB    
[ebuild  N    ]   x11-misc/ttmkfdir-3.0.9-r3  0 kB    
[ebuild  N    ]   x11-base/opengl-update-3.0.0  0 kB    
[ebuild  N    ]    app-admin/eselect-opengl-1.0.2-r1  0 kB    
[ebuild  N    ]     app-admin/eselect-0.9.6  -bash-completion -doc 0 kB    
[ebuild  N    ]     app-arch/bzip2-1.0.3-r5  -build -static 0 kB    
[ebuild  N    ]   sys-apps/util-linux-2.12r  +crypt +nls -old-crypt +pam +perl   
(-selinux) -static 0 kB    
[ebuild  N    ]    app-crypt/hashalot-0.3  78 kB    
[ebuild  N    ]    sys-fs/e2fsprogs-1.38  +nls -static 0 kB    
[ebuild  N    ]     sys-libs/ss-1.38  +nls 0 kB    
[ebuild  N    ]     sys-libs/com_err-1.38  +nls 0 kB    
[ebuild  N    ]    sys-apps/pam-login-4.0.12  -livecd +nls (-selinux) 0 kB    
[ebuild  N    ]     sys-apps/shadow-4.0.12  +nls -nousuid +pam (-selinux)   
+skey 0 kB    
[ebuild  N    ]      sys-libs/pam-0.78-r2  +berkdb -nis -pam_chroot   
-pam_console -pam_timestamp -pwdb (-selinux) 6,345 kB    
[ebuild  N    ]       dev-util/pkgconfig-0.19  -hardened 0 kB    
[ebuild  N    ]       sys-devel/flex-2.5.4a-r6  -build -static 0 kB    
[ebuild  N    ]      sys-apps/portage-2.0.53_rc4  -build (-selinux) 0 kB    
[ebuild  N    ]       sys-apps/debianutils-2.14.1-r1  -build -static 0 kB    
[ebuild  N    ]       sys-apps/sandbox-1.2.13  0 kB    
[ebuild  N    ]       dev-python/python-fchksum-1.7.1  26 kB    
[ebuild  N    ]        dev-lang/python-2.4.2  +X +berkdb -bootstrap -build   
-doc +gdbm +ipv6 +ncurses -nocxx +readline +ssl +tcltk -ucs2 0 kB    
[ebuild  N    ]         dev-lang/tk-8.4.11  -threads 0 kB    
[ebuild  N    ]         dev-libs/openssl-0.9.7g  -bindist +emacs -test +zlib 0   
kB    
[ebuild  N    ]          sys-apps/diffutils-2.8.7-r1  +nls -static 1,037 kB    
[ebuild  N    ]         sys-libs/readline-5.0-r2  1,777 kB    
[ebuild  N    ]         dev-libs/expat-1.95.8  -test 310 kB    
[ebuild  N    ]     app-admin/skey-1.1.5-r5  0 kB    
[ebuild  N    ]      sys-libs/cracklib-2.8.5  +python 0 kB    
[ebuild  N    ]  media-libs/libpng-1.2.8  -doc 0 kB    
[ebuild  N    ]  media-libs/jpeg-6b-r6  0 kB    
[ebuild  N    ]   sys-devel/libtool-1.5.20  0 kB    
[ebuild  N    ]    sys-devel/automake-1.9.6-r1  0 kB    
[ebuild  N    ]     sys-devel/automake-wrapper-1-r1  0 kB    
[ebuild  N    ]      sys-devel/automake-1.4_p6  366 kB    
[ebuild  N    ]      sys-devel/automake-1.7.9-r1  564 kB    
[ebuild  N    ]      sys-devel/automake-1.6.3  465 kB    
[ebuild  N    ]      sys-devel/automake-1.8.5-r3  647 kB    
[ebuild  N    ] app-admin/perl-cleaner-1.01  3 kB    
[ebuild  N    ]      sys-devel/automake-1.5  514 kB    
[ebuild  N    ]       sys-devel/autoconf-2.59-r7  +emacs 0 kB    
[ebuild  N    ]        sys-devel/autoconf-wrapper-3.2  0 kB    
[ebuild  N    ]         sys-devel/autoconf-2.13  433 kB    
[ebuild  N    ]          dev-lang/perl-5.8.7-r1  +berkdb -build -debug -doc   
+gdbm -ithreads -minimal -perlsuid 0 kB    
[ebuild  N    ]           sys-devel/libperl-5.8.7  +berkdb -debug +gdbm   
-ithreads 0 kB    
[ebuild  N    ]            sys-libs/gdbm-1.8.3-r2  +berkdb 0 kB    
[ebuild  N    ] sys-apps/man-1.6a  +nls 0 kB    
[ebuild  N    ]  sys-process/cronbase-0.3.2  0 kB    
[ebuild  N    ]            sys-apps/groff-1.19.1-r2  +X 2,567 kB    
[ebuild  N    ]           sys-libs/db-4.2.52_p2  -bootstrap -doc -java -nocxx   
+tcltk 0 kB    
[ebuild  N    ]            dev-lang/tcl-8.4.11  -threads 0 kB    
[ebuild  N    ]  media-libs/freetype-2.1.10  -bindist -doc +zlib 0 kB    
[ebuild  N    ]   sys-libs/glibc-2.3.5-r2  -build -erandom -glibc-compat20   
-glibc-omitfp -hardened -linuxthreads-tls (-multilib) +nls +nptl -nptlonly   
-pic -profile (-selinux) +userlocales 0 kB    
[ebuild  N    ]    sys-kernel/linux-headers-2.6.11-r2  36,238 kB    
[ebuild  N    ] sys-devel/gcc-3.3.6  (-altivec) -bootstrap -boundschecking   
-build -fortran -gcj +gtk -hardened -ip28 (-multilib) -multislot (-n32) (-n64)   
+nls -nocxx -nopie -nossp -objc -static -vanilla 0 kB    
[ebuild  N    ]    sys-devel/gcc-3.4.4-r1  (-altivec) -bootstrap   
-boundschecking -build -fortran -gcj +gtk -hardened -ip28 (-multilib)   
-multislot (-n32) (-n64) +nls -nocxx -nopie -nossp -objc -static -vanilla 0 kB    
[ebuild  N    ]     sys-devel/gcc-config-1.3.12-r2  0 kB    
[ebuild  N    ]     sys-apps/texinfo-4.8-r2  -build +nls -static 0 kB    
[ebuild  N    ]     sys-apps/sed-4.1.4  -bootstrap -build +nls -static 775 kB    
[ebuild  N    ]     sys-devel/bison-2.1  +nls -static 0 kB    
[ebuild  N    ]      sys-devel/m4-1.4.3  +nls 0 kB    
[ebuild  N    ]     sys-devel/binutils-2.16.1  -multislot -multitarget +nls   
-test 0 kB    
[ebuild  N    ]      sys-devel/gettext-0.14.5  -doc +emacs +nls 0 kB    
[ebuild  N    ]      sys-devel/gnuconfig-20050602  0 kB    
[ebuild  N    ]      sys-devel/binutils-config-1.8-r5  0 kB    
[ebuild  N    ]       app-shells/bash-3.0-r12  -bashlogger -build +nls 2,404   
kB    
[ebuild  N    ]        sys-libs/ncurses-5.4.20050319  -bootstrap -build -debug   
-doc +gpm -minimal -nocxx +unicode 0 kB    
[ebuild  N    ]         sys-libs/gpm-1.20.1-r5  +emacs (-selinux) 0 kB    
[ebuild  N    ]   sys-libs/zlib-1.2.3  -build 415 kB    
[ebuild  N    ]    sys-devel/patch-2.5.9-r1  -build -static 0 kB    
   
Total size of downloads: 82,409 kB   
   
   
Notice how dev-db/mysql is emerged after x11-libs/qt even though the later  
has an explicit dependency on the former.  I just had an emerge abort 
because of that one.  I have had several such odd experiences, for example 
with tk which was scheduled for emerging before x11-org on which it depends. 
etc... 
 
Here is my "portage --info", but don't be surprised with the uname info: 
I am currently booted into kubuntu, with gentoo installing in a chroot: 
 
Portage 2.0.53_rc4 (default-linux/x86/2005.1, gcc-3.3.6, glibc-2.3.5-r2, 
2.6.12-9-386 i686) 
================================================================= 
System uname: 2.6.12-9-386 i686 Intel(R) Pentium(R) 4 CPU 2.80GHz 
Gentoo Base System version 1.12.0_pre8 
dev-lang/python:     2.3.5, 2.4.2 
sys-apps/sandbox:    1.2.13 
sys-devel/autoconf:  2.13, 2.59-r7 
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r1 
sys-devel/binutils:  2.16.1 
sys-devel/libtool:   1.5.20 
virtual/os-headers:  2.6.11-r2 
ACCEPT_KEYWORDS="x86 ~x86" 
AUTOCLEAN="yes" 
CBUILD="i686-pc-linux-gnu" 
CFLAGS="-O2 -march=pentium4 -pipe -fomit-frame-pointer" 
CHOST="i686-pc-linux-gnu" 
CONFIG_PROTECT="/etc /usr/kde/2/share/config /usr/kde/3/share/config /usr/share/config /var/qmail/control" 
CONFIG_PROTECT_MASK="/etc/gconf /etc/env.d" 
CXXFLAGS="-O2 -march=pentium4 -pipe -fomit-frame-pointer" 
DISTDIR="/usr/portage/distfiles" 
FEATURES="autoconfig distlocks sandbox sfperms strict" 
GENTOO_MIRRORS="http://distfiles.gentoo.org 
http://distro.ibiblio.org/pub/linux/distributions/gentoo" 
LANG="en_US.UTF-8" 
MAKEOPTS="-j2" 
PKGDIR="/usr/portage/packages" 
PORTAGE_TMPDIR="/var/tmp" 
PORTDIR="/usr/portage" 
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage" 
USE="x86 X X509 alsa apm arts audiofile avi berkdb bitmap-fonts bzip2 crypt 
cups curl dbus dga directfb eds emacs emboss encode fbcon flac foomaticdb gdbm 
gif gphoto2 gpm gstreamer gtk gtk2 hal ieee1394 imlib ipv6 jpeg jpeg2k kde 
ldap libg++ libwww lirc mad mikmod mmap mmx motif mp3 mpeg mpi musicbrainz 
mysql ncurses nls nptl odbc ogg oggvorbis opengl oss pam pdflib perl png 
python qt quicktime readline samba sasl sdl skey slp sndfile speex spell 
sqlite sse sse2 ssl svga tcltk tcpd tetex theora tiff truetype truetype-fonts 
type1-fonts unicode usb vorbis wifi xine xml2 xmms xv zeroconf zlib 
userland_GNU kernel_linux elibc_glibc" 
Unset:  ASFLAGS, CTARGET, LC_ALL, LDFLAGS, LINGUAS, PORTDIR_OVERLAY
Comment 1 Marius Mauch (RETIRED) gentoo-dev 2005-10-09 18:35:21 UTC
"These are the packages that I would merge, __in reverse order__"
Comment 2 Marius Mauch (RETIRED) gentoo-dev 2005-10-09 18:42:36 UTC
Ehm, that might not be clear enough:
a) --tree screws the order up, don't use it if you want to say anything about order
b) --emtpytree screws the depgraph as it includes "system", so you're not
getting a "pure" qt depgraph.
Comment 3 Jason Stubbs (RETIRED) gentoo-dev 2005-10-09 20:21:54 UTC
Not quite.. 
Comment 4 Jason Stubbs (RETIRED) gentoo-dev 2005-10-09 20:22:18 UTC

*** This bug has been marked as a duplicate of 16365 ***
Comment 5 Denys Duchier 2005-10-10 01:54:43 UTC
(In reply to comment #2) 
Ehm back at you :-) 
 
a) --tree makes no difference to the problem as you can easily verify 
 
b) forgive the truism, but dependencies are dependencies, regardless 
   of the root set of packages with which the algorithm is started 
   to compute the relevant part of the dependency graph