x86_64-pc-linux-gnu-g++ -c -std=c++11 -fopenmp -D'COMPILATION_TIME_PLACE=""' -D'GIT_BRANCH_COMMIT_DIFF=""' -pipe -march=native -fno-diagnostics-color -O2 SoloBarcode.cpp x86_64-pc-linux-gnu-g++ -c -std=c++11 -fopenmp -D'COMPILATION_TIME_PLACE=""' -D'GIT_BRANCH_COMMIT_DIFF=""' -pipe -march=native -fno-diagnostics-color -O2 ParametersSolo.cpp In file included from SoloBarcode.h:4, from SoloBarcode.cpp:1: SoloCommon.h:47:25: error: field 'flagCountsNoCB' has incomplete type 'std::array<long long unsigned int, 15>' 47 | array<uint64,nBits> flagCountsNoCB={}; | ^~~~~~~~~~~~~~ ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_no_multilib_systemd-j4-20220422-040006 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-9.3.1 [2] x86_64-pc-linux-gnu-12.0.1 * clang/llvm (if any): clang version 14.0.1 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/14/bin /usr/lib/llvm/14 14.0.1 Python 3.9.12 Available Rust versions: [1] rust-1.60.0 * The Glorious Glasgow Haskell Compilation System, version 8.10.4 php cli: HEAD of ::gentoo commit 58f8e98f9f89c991dce0946b26a43d092b9b0b92 Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Sun Apr 24 11:58:01 2022 +0000 2022-04-24 11:58:01 UTC emerge -qpvO sci-biology/STAR [ebuild N ] sci-biology/STAR-2.7.10a
Created attachment 774103 [details] emerge-info.txt
Created attachment 774106 [details] emerge-history.txt
Created attachment 774109 [details] environment
Created attachment 774112 [details] etc.portage.tar.bz2
Created attachment 774115 [details] sci-biology:STAR-2.7.10a:20220424-125522.log
Created attachment 774118 [details] temp.tar.bz2
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=1f20252245bf55c15c8664783024d06c1eaf6c6a commit 1f20252245bf55c15c8664783024d06c1eaf6c6a Author: David Seifert <soap@gentoo.org> AuthorDate: 2022-05-07 13:13:13 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2022-05-07 13:13:13 +0000 sci-biology/STAR: fix GCC 12 build Closes: https://bugs.gentoo.org/840586 Signed-off-by: David Seifert <soap@gentoo.org> sci-biology/STAR/STAR-2.7.10a.ebuild | 5 ++++- .../STAR/files/STAR-2.7.10a-missing-include.patch | 22 ++++++++++++++++++++++ 2 files changed, 26 insertions(+), 1 deletion(-)
