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Bug 837380 - emrge sync then world and suddenly bunch of ACCESS DENIED: mkdir: /run/user/250
Summary: emrge sync then world and suddenly bunch of ACCESS DENIED: mkdir: /run/user/250
Status: RESOLVED DUPLICATE of bug 837362
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Linux bug wranglers
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2022-04-09 11:16 UTC by Mamadou Babaei
Modified: 2022-12-01 02:30 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
msgpack build log (build-msgpack.log,5.02 KB, text/x-log)
2022-04-09 11:16 UTC, Mamadou Babaei
Details
libcap-ng build log (build-libcap-ng.log,29.05 KB, text/x-log)
2022-04-09 11:17 UTC, Mamadou Babaei
Details
wget build log (build-wget.log,154.45 KB, text/x-log)
2022-04-09 11:17 UTC, Mamadou Babaei
Details
xdpyinfo build log (build-xdpyinfo.log,26.48 KB, text/x-log)
2022-04-09 11:17 UTC, Mamadou Babaei
Details

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Description Mamadou Babaei 2022-04-09 11:16:49 UTC
Created attachment 769610 [details]
msgpack build log

I did the regular:

$ emerge --sync && emerge -uDN @world

And, some packages are failing, including:

>>> Emerging (1 of 11) dev-ruby/msgpack-1.5.1::gentoo
>>> Failed to emerge dev-ruby/msgpack-1.5.1, Log file:
>>>  '/var/tmp/portage/dev-ruby/msgpack-1.5.1/temp/build.log'

>>> Verifying ebuild manifests
>>> Running pre-merge checks for dev-lang/rust-1.60.0
 * Checking for at least 7936 MiB disk space at "/var/tmp/portage/dev-lang/rust-1.60.0/temp" ...                                                                                             [ ok ]
>>> Running pre-merge checks for www-client/firefox-99.0
 * Checking for at least 6500 MiB disk space at "/var/tmp/portage/www-client/firefox-99.0/temp" ...                                                                                          [ ok ]
>>> Emerging (1 of 11) dev-ruby/msgpack-1.5.1::gentoo
>>> Failed to emerge dev-ruby/msgpack-1.5.1, Log file:
>>>  '/var/tmp/portage/dev-ruby/msgpack-1.5.1/temp/build.log'
>>> Jobs: 0 of 11 complete, 1 failed                Load avg: 12.1, 18.7, 12.3
*** Resuming merge...
Calculating dependencies... done!
>>> Running pre-merge checks for dev-lang/rust-1.60.0
 * Checking for at least 7936 MiB disk space at "/var/tmp/portage/dev-lang/rust-1.60.0/temp" ...                                                                                             [ ok ]
>>> Running pre-merge checks for www-client/firefox-99.0
 * Checking for at least 6500 MiB disk space at "/var/tmp/portage/www-client/firefox-99.0/temp" ...                                                                                          [ ok ]
>>> Emerging (1 of 10) net-misc/wget-1.21.3::gentoo
>>> Emerging (2 of 10) sys-libs/libcap-ng-0.8.3::gentoo
>>> Failed to emerge sys-libs/libcap-ng-0.8.3, Log file:
>>>  '/var/tmp/portage/sys-libs/libcap-ng-0.8.3/temp/build.log'
>>> Failed to emerge net-misc/wget-1.21.3, Log file:
>>>  '/var/tmp/portage/net-misc/wget-1.21.3/temp/build.log'
>>> Jobs: 0 of 10 complete, 2 failed                Load avg: 8.2, 17.2, 12.0
*** Resuming merge...
Calculating dependencies... done!
>>> Running pre-merge checks for dev-lang/rust-1.60.0
 * Checking for at least 7936 MiB disk space at "/var/tmp/portage/dev-lang/rust-1.60.0/temp" ...                                                                                             [ ok ]
>>> Running pre-merge checks for www-client/firefox-99.0
 * Checking for at least 6500 MiB disk space at "/var/tmp/portage/www-client/firefox-99.0/temp" ...                                                                                          [ ok ]
>>> Emerging (1 of 8) x11-apps/xdpyinfo-1.3.3::gentoo
>>> Failed to emerge x11-apps/xdpyinfo-1.3.3, Log file:
>>>  '/var/tmp/portage/x11-apps/xdpyinfo-1.3.3/temp/build.log'
>>> Jobs: 0 of 8 complete, 1 failed                 Load avg: 7.8, 16.9, 11.9
*** Resuming merge...
Calculating dependencies... done!
>>> Running pre-merge checks for dev-lang/rust-1.60.0
 * Checking for at least 7936 MiB disk space at "/var/tmp/portage/dev-lang/rust-1.60.0/temp" ...                                                                                             [ ok ]
>>> Running pre-merge checks for www-client/firefox-99.0
 * Checking for at least 6500 MiB disk space at "/var/tmp/portage/www-client/firefox-99.0/temp" ...                                                                                          [ ok ]
>>> Emerging (1 of 7) dev-lang/rust-1.60.0::gentoo
>>> Jobs: 0 of 7 complete, 1 running                Load avg: 18.9, 16.9, 12.8
Comment 1 Mamadou Babaei 2022-04-09 11:17:11 UTC
Created attachment 769613 [details]
libcap-ng build log
Comment 2 Mamadou Babaei 2022-04-09 11:17:26 UTC
Created attachment 769616 [details]
wget build log
Comment 3 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-04-09 11:17:36 UTC

*** This bug has been marked as a duplicate of bug 837362 ***
Comment 4 Mamadou Babaei 2022-04-09 11:17:48 UTC
Created attachment 769619 [details]
xdpyinfo build log
Comment 5 Mamadou Babaei 2022-04-09 11:18:17 UTC
$ emerge --info                                                                                                                    
Portage 3.0.30 (python 3.9.12-final-0, default/linux/amd64/17.1/desktop, gcc-11.2.1, glibc-2.35-r2, 5.15.32 x86_64)
=================================================================
System uname: Linux-5.15.32-x86_64-11th_Gen_Intel-R-_Core-TM-_i7-11800H_@_2.30GHz-with-glibc2.35
KiB Mem:    32726460 total,   2482300 free
KiB Swap:   33554428 total,  33509116 free
Timestamp of repository gentoo: Sat, 09 Apr 2022 10:49:39 +0000
Head commit of repository gentoo: cc89bb24c06f1811744fcbc2805ba89fe0c5ee3e

sh bash 5.1_p16
ld GNU ld (Gentoo 2.38 p3) 2.38
ccache version 4.6 [enabled]
app-misc/pax-utils:        1.3.3::gentoo
app-shells/bash:           5.1_p16::gentoo
dev-java/java-config:      2.3.1::gentoo
dev-lang/perl:             5.34.1::gentoo
dev-lang/python:           3.9.12::gentoo, 3.10.4::gentoo
dev-lang/rust:             1.59.0::gentoo
dev-util/ccache:           4.6::gentoo
dev-util/cmake:            3.23.0::gentoo
dev-util/meson:            0.61.4-r2::gentoo
sys-apps/baselayout:       2.8::gentoo
sys-apps/openrc:           0.44.10::gentoo
sys-apps/sandbox:          2.29::gentoo
sys-devel/autoconf:        2.13-r1::gentoo, 2.71-r1::gentoo
sys-devel/automake:        1.16.5::gentoo
sys-devel/binutils:        2.38-r1::gentoo
sys-devel/binutils-config: 5.4.1::gentoo
sys-devel/clang:           13.0.1::gentoo, 14.0.0-r1::gentoo
sys-devel/gcc:             11.2.1_p20220115::gentoo
sys-devel/gcc-config:      2.5-r1::gentoo
sys-devel/libtool:         2.4.7::gentoo
sys-devel/lld:             13.0.1::gentoo
sys-devel/llvm:            13.0.1::gentoo, 14.0.0::gentoo
sys-devel/make:            4.3::gentoo
sys-kernel/linux-headers:  5.17::gentoo (virtual/os-headers)
sys-libs/glibc:            2.35-r2::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/gentoo.git
    priority: 10
    sync-git-verify-commit-signature: true

NuLL3rr0r
    location: /var/db/repos/local
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/var/cache/portage/distfiles"
EMERGE_DEFAULT_OPTS="--jobs=16 --load-average=16 --keep-going --with-bdeps=y"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-march=native -O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg buildpkg-live ccache config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--sort-common -Wl,--as-needed"
LINGUAS="en_US en fa_IR fa nl_NL nl"
MAKEOPTS="-j17 -l16"
PKGDIR="/var/cache/portage/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/zsh"
USE="X a52 aac acl acpi alsa amd64 bluetooth branding bzip2 cairo cdda cdr cli crypt cups dbus dri dts dvd dvdr elogind encode exif flac fortran gdbm gif gpm gtk gui iconv icu ipv6 jpeg lcms libglvnd libnotify libtirpc lm-sensors mad mng mp3 mp4 mpeg multilib ncurses nls nptl ogg opengl openmp pam pango pcre pdf png policykit ppds pulseaudio qt5 readline sdl seccomp spell split-usr ssl startup-notification svg tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 xattr xcb xml xv xvid zlib" ABI_X86="64" ADA_TARGET="gnat_2020" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 avx512f avx512dq avx512cd avx512bw avx512vl avx512vbmi f16c fma3 mmx mmxext pclmul popcnt rdrand sha sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="joystick keyboard libinput mouse" KERNEL="linux" L10N="en-US en fa-IR fa nl-NL nl" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LLVM_TARGETS="BPF NVPTX X86" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-4 php8-0" POSTGRES_TARGETS="postgres14" PYTHON_SINGLE_TARGET="python3_9" PYTHON_TARGETS="python3_9" RUBY_TARGETS="ruby26 ruby27" USERLAND="GNU" VIDEO_CARDS="nvidia v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LEX, LFLAGS, LIBTOOL, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
Comment 6 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-04-09 11:21:06 UTC
See bug 837362.
Comment 7 Mamadou Babaei 2022-04-09 11:22:40 UTC
Thanks, I've just noticed it. So, that means in a few hours after you'd be able to commit a emerge --sync should make it go away?
Comment 8 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-04-09 11:26:03 UTC
(In reply to Mamadou Babaei from comment #7)
> Thanks, I've just noticed it. So, that means in a few hours after you'd be
> able to commit a emerge --sync should make it go away?

Yes, but there's a caveat that you'll need to disable ccache in make.conf temporarily to re-emerge ccache first (FEATURES="-ccache" emerge -v1 ccache will work too).
Comment 9 Larry the Git Cow gentoo-dev 2022-04-09 11:26:53 UTC
The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9767f9723c5c168a772653541283cb9065090c1e

commit 9767f9723c5c168a772653541283cb9065090c1e
Author:     Sam James <sam@gentoo.org>
AuthorDate: 2022-04-09 11:26:14 +0000
Commit:     Sam James <sam@gentoo.org>
CommitDate: 2022-04-09 11:26:46 +0000

    dev-util/ccache: restore /run-skip patch
    
    I still can't hit this but let's rebase the old patch
    given it makes sense for now.
    
    Closes: https://bugs.gentoo.org/837362
    Bug: https://bugs.gentoo.org/837380
    Signed-off-by: Sam James <sam@gentoo.org>

 dev-util/ccache/ccache-4.6.ebuild                  |  1 +
 .../ccache/files/ccache-4.6-avoid-run-user.patch   | 28 ++++++++++++++++++++++
 2 files changed, 29 insertions(+)
Comment 10 Larry the Git Cow gentoo-dev 2022-04-09 11:28:03 UTC
The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=035fe04cb6f6f041330ab7561bdd1dc7687343de

commit 035fe04cb6f6f041330ab7561bdd1dc7687343de
Author:     Sam James <sam@gentoo.org>
AuthorDate: 2022-04-09 11:27:15 +0000
Commit:     Sam James <sam@gentoo.org>
CommitDate: 2022-04-09 11:27:54 +0000

    dev-util/ccache: revbump for /run fix
    
    Thought I had!
    
    Fixes: 9767f9723c5c168a772653541283cb9065090c1e
    Bug: https://bugs.gentoo.org/837362
    Bug: https://bugs.gentoo.org/837380
    Signed-off-by: Sam James <sam@gentoo.org>

 dev-util/ccache/{ccache-4.6.ebuild => ccache-4.6-r1.ebuild} | 0
 1 file changed, 0 insertions(+), 0 deletions(-)
Comment 11 Mamadou Babaei 2022-04-09 11:28:34 UTC
Thank you!