* Applying ncbi-tools-2.2.26-_DEFAULT_SOURCE.patch ... [ ok ] sed: -e expression #9, char 82: unknown option to `s' * ERROR: sci-biology/ncbi-tools-2.2.26-r2::gentoo failed (prepare phase): * (no error message) * ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_desktop_gnome-20200218-201111 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-9.2.0 * clang: clang version 9.0.1 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/9/bin llvm: 9.0.1 Available Python interpreters, in order of preference: [1] python3.8 [2] python3.6 [3] python3.7 (fallback) [4] python2.7 (fallback) Available Ruby profiles: [1] ruby24 (with Rubygems) [2] ruby25 (with Rubygems) * Available Rust versions: [1] rust-1.41.0 * java-config: The following VMs are available for generation-2: *) IcedTea JDK 3.14.0 [icedtea-bin-8] Available Java Virtual Machines: [1] icedtea-bin-8 system-vm ghc: The Glorious Glasgow Haskell Compilation System, version 8.0.2 repository: ==> /var/db/repos/gentoo/metadata/timestamp.chk <== Thu, 20 Feb 2020 17:11:39 +0000 emerge -qpvO sci-biology/ncbi-tools [ebuild N ] sci-biology/ncbi-tools-2.2.26-r2 USE="X -doc -static-libs"
Created attachment 614728 [details] emerge-info.txt
Created attachment 614730 [details] emerge-history.txt
Created attachment 614732 [details] environment
Created attachment 614734 [details] etc.portage.tbz2
Created attachment 614736 [details] logs.tbz2
Created attachment 614738 [details] sci-biology:ncbi-tools-2.2.26-r2:20200220-182627.log
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=59b2be273d92b67c4c7f581657151a5e7cbb63ae commit 59b2be273d92b67c4c7f581657151a5e7cbb63ae Author: Jakov Smolić <jsmolic@gentoo.org> AuthorDate: 2021-08-30 17:17:23 +0000 Commit: Jakov Smolić <jsmolic@gentoo.org> CommitDate: 2021-08-30 17:38:50 +0000 sci-biology/ncbi-tools: Remove last-rited package Closes: https://bugs.gentoo.org/649930 Closes: https://bugs.gentoo.org/782790 Closes: https://bugs.gentoo.org/741188 Closes: https://bugs.gentoo.org/715636 Closes: https://bugs.gentoo.org/710338 Closes: https://bugs.gentoo.org/701340 Closes: https://bugs.gentoo.org/586982 Closes: https://bugs.gentoo.org/295584 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org> profiles/package.mask | 6 - sci-biology/ncbi-tools/Manifest | 1 - sci-biology/ncbi-tools/files/21ncbi-r1 | 6 - .../files/ncbi-tools-2.2.26-_DEFAULT_SOURCE.patch | 81 ---------- .../files/ncbi-tools-2.2.26-bfr-overflow.patch | 103 ------------- .../files/ncbi-tools-2.2.26-format-security.patch | 124 --------------- .../ncbi-tools/files/ncbi-tools-extra_vib.patch | 37 ----- sci-biology/ncbi-tools/files/ncbi-tools-lop.patch | 15 -- sci-biology/ncbi-tools/files/ncbirc | 2 - sci-biology/ncbi-tools/metadata.xml | 8 - sci-biology/ncbi-tools/ncbi-tools-2.2.26-r3.ebuild | 169 --------------------- 11 files changed, 552 deletions(-)
