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Bug 692266 - sys-apps/groff-1.22.4 with sys-apps/findutils-4.6.0-r1 : file collision in /usr/lib/charset.alias
Summary: sys-apps/groff-1.22.4 with sys-apps/findutils-4.6.0-r1 : file collision in /u...
Status: RESOLVED INVALID
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: ARM64 Linux
: Normal normal (vote)
Assignee: Gentoo's Team for Core System packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 704420
  Show dependency tree
 
Reported: 2019-08-16 01:09 UTC by Archit Gupta
Modified: 2020-02-10 00:15 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


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Description Archit Gupta 2019-08-16 01:09:06 UTC
Emerging sys-apps/groff-1.22.4 fails due to file collision on /usr/lib/charset.alias. This file is owned by sys-apps/findutils-4.6.0-r1.
This issue occurs with sys-apps/groff-1.22.4 from the gentoo repo and also the one from the musl overlay. 

Reproducible: Always




Portage 2.3.71 (python 3.6.9-final-0, default/linux/arm64/17.0/musl, gcc-9.2.0, musl-1.1.23, 4.19.65-v8+ aarch64)
=================================================================
System uname: Linux-4.19.65-v8+-aarch64-with-gentoo-2.6
KiB Mem:     3949768 total,   1884872 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Thu, 15 Aug 2019 18:46:24 +0000
Head commit of repository gentoo: 6a29209c3f11139b8ad3a34b23d412be3d89ee4f

Head commit of repository musl: 72f1b5f8ad45bcc86fab7ca18d6f49a4aea4ee26

sh dash 0.5.10.2
ld GNU ld (Gentoo 2.32 p2) 2.32.0
distcc 3.3.3 aarch64-gentoo-linux-musl [enabled]
app-shells/bash:          5.0_p9::gentoo
dev-lang/perl:            5.30.0::gentoo
dev-lang/python:          2.7.16::gentoo, 3.6.9::gentoo
dev-util/cmake:           3.15.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/openrc:          0.41.2::gentoo
sys-apps/sandbox:         2.18::gentoo
sys-devel/autoconf:       2.69-r4::gentoo
sys-devel/automake:       1.11.6-r3::gentoo, 1.16.1-r1::gentoo
sys-devel/binutils:       2.32-r1::gentoo
sys-devel/gcc:            9.2.0::gentoo
sys-devel/gcc-config:     2.0::gentoo
sys-devel/libtool:        2.4.6-r5::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 5.1::musl (virtual/os-headers)
sys-libs/musl:            1.1.23::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/gentoo
    priority: -1000

musl
    location: /var/db/repos/musl
    sync-type: git
    sync-uri: https://github.com/gentoo/musl.git
    masters: gentoo
    priority: 10

localrepo
    location: /var/db/repos/localrepo
    masters: gentoo
    priority: 15

ACCEPT_KEYWORDS="arm64 ~arm64"
ACCEPT_LICENSE="@FREE"
CBUILD="aarch64-gentoo-linux-musl"
CFLAGS="-march=armv8-a+crc -mtune=cortex-a72 -O2 -pipe -fomit-frame-pointer -ftree-vectorize"
CHOST="aarch64-gentoo-linux-musl"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=armv8-a+crc -mtune=cortex-a72 -O2 -pipe -fomit-frame-pointer -ftree-vectorize"
DISTDIR="/var/cache/distfiles"
EMERGE_DEFAULT_OPTS="--jobs=4 --load-average=4 --ask --tree --quiet-build y"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-march=armv8-a+crc -mtune=cortex-a72 -O2 -pipe -fomit-frame-pointer -ftree-vectorize"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg cgroup collision-protect config-protect-if-modified distcc distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox news notitles parallel-fetch parallel-install pid-sandbox preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=armv8-a+crc -mtune=cortex-a72 -O2 -pipe -fomit-frame-pointer -ftree-vectorize"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
INSTALL_MASK="/usr/share/fish/*"
LDFLAGS="-march=armv8-a+crc -mtune=cortex-a72 -O2 -pipe -fomit-frame-pointer -ftree-vectorize"
MAKEOPTS="-j12 -l4"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl arm64 bzip2 cli crypt cxx dri eselect-ldso fortran iconv ipv6 libtirpc ncurses nptl openmp pam pcre readline seccomp split-usr ssl tcpd threads unicode xattr zlib zsh-completion" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_ARM="edsp neon thumb thumb2 v4 v5 v6 v7 v8 vfp vfp-d32 vfpv3 vfpv4" ELIBC="musl" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" L10N="en" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" NETBEANS_MODULES="apisupport cnd groovy gsf harness ide identity j2ee java mobility nb php profiler soa visualweb webcommon websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" RUBY_TARGETS="ruby24" USERLAND="GNU" VIDEO_CARDS="fbdev dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, LANG, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Jory A. Pratt gentoo-dev 2020-02-09 23:38:40 UTC
You have overridden the profile which already has an INSTALL_MASK for charset.alias, you should have set 

INSTALL_MASK="${INSTALL_MASK} /usr/share/fish/*"

Please adjust your make.conf file to reflect the change and retest.