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Bug 690900 - sci-biology/tree-puzzle-5.2 : ./ppuzzle.c:300:2: error: static assertion failed: MPI_Address was removed in MPI-3.0. Use MPI_Get_address instead.
Summary: sci-biology/tree-puzzle-5.2 : ./ppuzzle.c:300:2: error: static assertion fail...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Biology related packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: openmpi-4
  Show dependency tree
 
Reported: 2019-07-28 08:17 UTC by Toralf Förster
Modified: 2022-01-29 00:00 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,15.19 KB, text/plain)
2019-07-28 08:17 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,97.33 KB, text/plain)
2019-07-28 08:17 UTC, Toralf Förster
Details
environment (environment,73.21 KB, text/plain)
2019-07-28 08:17 UTC, Toralf Förster
Details
etc.portage.tbz2 (etc.portage.tbz2,11.64 KB, application/x-bzip)
2019-07-28 08:17 UTC, Toralf Förster
Details
logs.tbz2 (logs.tbz2,3.90 KB, application/x-bzip)
2019-07-28 08:17 UTC, Toralf Förster
Details
sci-biology:tree-puzzle-5.2:20190728-060048.log (sci-biology:tree-puzzle-5.2:20190728-060048.log,37.44 KB, text/plain)
2019-07-28 08:17 UTC, Toralf Förster
Details
temp.tbz2 (temp.tbz2,21.64 KB, application/x-bzip)
2019-07-28 08:17 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2019-07-28 08:17:08 UTC
                 from ./ppuzzle.c:25:
./ppuzzle.c: In function ‘PP_Update_EEI’:
./ppuzzle.c:300:2: error: static assertion failed: "MPI_Address was removed in MPI-3.0.  Use MPI_Get_address instead."
  300 |  MPI_Address(&(Eval[0]), &(Dtypeaddr[0]));
      |  ^~~~~~~~~~~
./ppuzzle.c:302:2: error: static assertion failed: "MPI_Address was removed in MPI-3.0.  Use MPI_Get_address instead."

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1_hardened-libressl-20190727-005416

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-9.1.0 *

Available Python interpreters, in order of preference:
  [1]   python3.6
  [2]   python2.7 (fallback)
Available Ruby profiles:
  [1]   ruby24 (with Rubygems) *




emerge -qpvO sci-biology/tree-puzzle
[ebuild  N    ] sci-biology/tree-puzzle-5.2  USE="mpi"
Comment 1 Toralf Förster gentoo-dev 2019-07-28 08:17:10 UTC
Created attachment 584870 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2019-07-28 08:17:13 UTC
Created attachment 584872 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2019-07-28 08:17:16 UTC
Created attachment 584874 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2019-07-28 08:17:19 UTC
Created attachment 584876 [details]
etc.portage.tbz2
Comment 5 Toralf Förster gentoo-dev 2019-07-28 08:17:21 UTC
Created attachment 584878 [details]
logs.tbz2
Comment 6 Toralf Förster gentoo-dev 2019-07-28 08:17:24 UTC
Created attachment 584880 [details]
sci-biology:tree-puzzle-5.2:20190728-060048.log
Comment 7 Toralf Förster gentoo-dev 2019-07-28 08:17:27 UTC
Created attachment 584882 [details]
temp.tbz2
Comment 8 Larry the Git Cow gentoo-dev 2022-01-29 00:00:29 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8fe21c3fd5b5e7be60a75a09ba4b3ec4bad417bd

commit 8fe21c3fd5b5e7be60a75a09ba4b3ec4bad417bd
Author:     David Seifert <soap@gentoo.org>
AuthorDate: 2022-01-29 00:00:14 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2022-01-29 00:00:14 +0000

    sci-biology/tree-puzzle: fix build system and MPI
    
    Closes: https://bugs.gentoo.org/690900
    Closes: https://bugs.gentoo.org/810502
    Closes: https://bugs.gentoo.org/814185
    Signed-off-by: David Seifert <soap@gentoo.org>

 .../files/tree-puzzle-5.2-MPI-3.0.patch            | 362 +++++++++++++++++++++
 sci-biology/tree-puzzle/tree-puzzle-5.2.ebuild     |  25 +-
 2 files changed, 375 insertions(+), 12 deletions(-)