Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 658698 - sci-libs/vtk: add python3 support
Summary: sci-libs/vtk: add python3 support
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2018-06-21 21:59 UTC by Charles G. Waldman
Modified: 2018-09-09 19:10 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
simple patch to add support to python 3 in vtk-8 (vtk_python3.patch,325 bytes, patch)
2018-09-06 07:32 UTC, Andres Alberto Vejar Perez
Details | Diff

Note You need to log in before you can comment on or make changes to this bug.
Description Charles G. Waldman 2018-06-21 21:59:16 UTC
VTK is compatilble with python3.6 but vtk-8.1.0-r1.ebuild has

PYTHON_COMPAT=( python2_7 )


Please update vtk ebuild to support python3.6

emerge --info

Portage 2.3.40 (python 3.6.5-final-0, default/linux/amd64/17.1, gcc-7.3.0, glibc-2.27-r4, 4.17.2-gentoo x86_64)
=================================================================
System uname: Linux-4.17.2-gentoo-x86_64-Intel-R-_Core-TM-_i7-8650U_CPU_@_1.90GHz-with-gentoo-2.6
KiB Mem:    16302288 total,  11449656 free
KiB Swap:    1000444 total,   1000444 free
Timestamp of repository gentoo: Thu, 21 Jun 2018 17:30:01 +0000
Head commit of repository gentoo: 304ed01b804ade509c96c6fc7004b23b163a285a
sh bash 4.4_p23
ld GNU ld (Gentoo 2.30 p3) 2.30.0
app-shells/bash:          4.4_p23::gentoo
dev-lang/perl:            5.26.2::gentoo
dev-lang/python:          2.7.15::gentoo, 3.6.5-r1::gentoo
dev-util/cmake:           3.11.4::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6::gentoo
sys-apps/openrc:          0.37::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.69-r4::gentoo
sys-devel/automake:       1.16.1-r1::gentoo
sys-devel/binutils:       2.30-r3::gentoo
sys-devel/gcc:            6.4.0-r1::gentoo, 7.3.0-r3::gentoo
sys-devel/gcc-config:     1.9.1::gentoo
sys-devel/libtool:        2.4.6-r5::gentoo
sys-devel/make:           4.2.1-r3::gentoo
sys-kernel/linux-headers: 4.17::gentoo (virtual/os-headers)
sys-libs/glibc:           2.27-r4::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-metamanifest: no
    sync-rsync-extra-opts: 
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-max-age: 24

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="rsync://rsync.gtlib.gatech.edu/gentoo rsync://mirrors.rit.edu/gentoo/ rsync://gentoo.cs.uni.edu/gentoo-distfiles"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j 10"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X aac acl alsa amd64 ao berkdb bs2b bzip2 cdda cli colordiff connman crypt cue cxx dbus dot dri egl emacs ffmpeg flac fortran gdbm gles gles2 gtk gtk3 gui iconv icu infinality ipv6 jack jpeg jpeg2k libsamplerate libtirpc mms modules mp3 multilib ncurses network nftables nls nptl opengl openmp pam pcre png python qt5 readline seccomp sndfile speedpitch ssl svg tcpd tiff unicode v4l vorbis wavpack widgets wxwidgets xattr xcb xft xkb xv xwidgets zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon plan sheets stage words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-0" POSTGRES_TARGETS="postgres9_5 postgres10" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" RUBY_TARGETS="ruby23" USERLAND="GNU" VIDEO_CARDS="intel i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Andres Alberto Vejar Perez 2018-09-06 07:32:54 UTC
Created attachment 546046 [details, diff]
simple patch to add support to python 3 in vtk-8
Comment 2 Andres Alberto Vejar Perez 2018-09-06 07:36:09 UTC
I was able to emerge vtk-8.1.0 with python3.6 support. 

emerge --info
Portage 2.3.48 (python 3.6.6-final-0, default/linux/amd64/17.0/desktop, gcc-8.2.0, glibc-2.27-r6, 4.18.3-gentoo x86_64)
=================================================================
System uname: Linux-4.18.3-gentoo-x86_64-Intel-R-_Core-TM-_i7-6500U_CPU_@_2.50GHz-with-gentoo-2.6
KiB Mem:    16315484 total,   9485752 free
KiB Swap:   20479996 total,  20479996 free
Timestamp of repository gentoo: Thu, 06 Sep 2018 06:30:01 +0000
Head commit of repository gentoo: f4cd77a0adcd5ffdd969bb4ef12ab5f010f7d0c2
sh bash 4.4_p23
ld GNU ld (Gentoo 2.31.1 p2) 2.31.1
distcc 3.2rc1 x86_64-pc-linux-gnu [disabled]
app-shells/bash:          4.4_p23::gentoo
dev-java/java-config:     2.2.0-r4::gentoo
dev-lang/perl:            5.26.2::gentoo
dev-lang/python:          2.7.15::gentoo, 3.4.8-r1::gentoo, 3.5.5-r1::gentoo, 3.6.6::gentoo, 3.7.0::gentoo
dev-util/cmake:           3.12.1::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/openrc:          0.38.2::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.15.1-r2::gentoo, 1.16.1-r1::gentoo
sys-devel/binutils:       2.31.1::gentoo
sys-devel/gcc:            6.4.0-r3::gentoo, 7.3.0-r4::gentoo, 8.2.0-r2::gentoo
sys-devel/gcc-config:     2.0::gentoo
sys-devel/libtool:        2.4.6-r5::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 4.17::gentoo (virtual/os-headers)
sys-libs/glibc:           2.27-r6::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-max-age: 24
    sync-rsync-extra-opts: 
    sync-rsync-verify-metamanifest: yes
    sync-rsync-verify-jobs: 1

stoned_repo
    location: /usr/local/portage
    masters: gentoo

science
    location: /var/lib/layman/science
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=native"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe -march=native"
DISTDIR="/usr/portage/distfiles"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe -march=native"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news nostrip parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe -march=native"
GENTOO_MIRRORS="http://gentoo.prz.rzeszow.pl http://ftp.vectranet.pl/gentoo/ ftp://ftp.vectranet.pl/gentoo/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi aes alsa amd64 avx avx2 berkdb bluetooth branding bzip2 cairo cdda cdr cli consolekit crypt cups cxx dbus dri dts dvd dvdr emboss encode exif f16c fam flac fma3 fortran gdbm gif glamor gnat_2018 gpm gtk gtk+ iconv infinality ipv6 jpeg lcms ldap libnotify libtirpc mad mmx mmxext mng modules mp3 mp4 mpeg multilib ncurses networkmanager nls nptl ogg opengl openmp pam pango pcre pdf png policykit popcnt ppds pulseaudio qt5 readline sdl seccomp spell sse sse2 sse3 sse4_1 sse4_2 ssl ssse3 startup-notification svg symlink tcpd thunar tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 xattr xcb xft xinerama xml xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon plan sheets stage words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="evdev libinput synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-0" POSTGRES_TARGETS="postgres9_5 postgres10" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" RUBY_TARGETS="ruby23 ruby22 ruby24 ruby25" USERLAND="GNU" VIDEO_CARDS="amdgpu radeonsi radeon intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 3 Larry the Git Cow gentoo-dev 2018-09-09 19:10:02 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a6334d713989743f3f7ab7e8c7ea078a4ed7bfd5

commit a6334d713989743f3f7ab7e8c7ea078a4ed7bfd5
Author:     Amy Liffey <amynka@gentoo.org>
AuthorDate: 2018-09-09 19:06:11 +0000
Commit:     Amy Liffey <amynka@gentoo.org>
CommitDate: 2018-09-09 19:09:21 +0000

    sci-libs/vtk: add python3 support
    
    Closes: https://bugs.gentoo.org/658698
    Suggested-by: Charles G. Waldman <cgw@alum.mit.edu>
    Package-Manager: Portage-2.3.40, Repoman-2.3.9

 sci-libs/vtk/vtk-8.1.0-r2.ebuild | 332 +++++++++++++++++++++++++++++++++++++++
 1 file changed, 332 insertions(+)