Created attachment 534044 [details] build.log Please see attached build.log. Portage 2.3.24 (python 3.5.5-final-0, default/linux/x86/17.0, gcc-6.4.0, glibc-2.25-r11, 4.9.95-gentoo i686) ================================================================= System uname: Linux-4.9.95-gentoo-i686-Intel-R-_Core-TM-_i7-3770K_CPU_@_3.50GHz-with-gentoo-2.4.1 KiB Mem: 3108308 total, 2127964 free KiB Swap: 488276 total, 449940 free Timestamp of repository gentoo: Tue, 29 May 2018 05:09:15 +0000 Head commit of repository gentoo: ee417c3d7e39637e639affa6872a6a15643afa53 sh bash 4.4_p12 ld GNU ld (Gentoo 2.29.1 p3) 2.29.1 app-shells/bash: 4.4_p12::gentoo dev-lang/perl: 5.24.3-r1::gentoo dev-lang/python: 2.7.14-r1::gentoo, 3.5.5::gentoo dev-util/cmake: 3.9.6::gentoo dev-util/pkgconfig: 0.29.2::gentoo sys-apps/baselayout: 2.4.1-r2::gentoo sys-apps/openrc: 0.34.11::gentoo sys-apps/sandbox: 2.13::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r4::gentoo sys-devel/automake: 1.11.6-r3::gentoo, 1.15.1-r2::gentoo sys-devel/binutils: 2.29.1-r1::gentoo sys-devel/gcc: 6.4.0-r1::gentoo sys-devel/gcc-config: 1.8-r1::gentoo sys-devel/libtool: 2.4.6-r3::gentoo sys-devel/make: 4.2.1::gentoo sys-kernel/linux-headers: 4.13::gentoo (virtual/os-headers) sys-libs/glibc: 2.25-r11::gentoo Repositories: gentoo location: /usr/portage sync-type: git sync-uri: https://github.com/gentoo-mirror/gentoo.git priority: -1000 ABI="x86" ABI_X86="32" ACCEPT_KEYWORDS="x86" ACCEPT_LICENSE="* -@EULA" ACCEPT_PROPERTIES="*" ACCEPT_RESTRICT="*" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ARCH="x86" AUTOCLEAN="yes" BOOTSTRAP_USE="cxx unicode internal-glib split-usr python_targets_python3_5 python_targets_python2_7" CALLIGRA_FEATURES="karbon plan sheets stage words" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -pipe -march=pentium4m -mtune=pentium4m" CHOST="i686-pc-linux-gnu" CHOST_x86="i686-pc-linux-gnu" CLEAN_DELAY="5" COLLECTD_PLUGINS="df load rrdtool syslog threshold" COLLISION_IGNORE="/lib/modules/* *.py[co] *$py.class */dropin.cache" CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/lib/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CPU_FLAGS_X86="mmx mmxext sse sse2" CXXFLAGS="-O2 -pipe -march=pentium4m -mtune=pentium4m" DEFAULT_ABI="x86" DISTDIR="/var/tmp/distfiles" EDITOR="/usr/bin/mcedit" ELIBC="glibc" EMERGE_DEFAULT_OPTS=" --quiet-build=n --verbose --color=n --with-bdeps=y --misspell-suggestions=n --jobs 4 --load-average 7.95" EMERGE_WARNING_DELAY="10" ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR PERL_MM_OPT PERL5LIB PERL5OPT PERL_MB_OPT PERL_CORE PERLPREFIX" EPREFIX="" EROOT="/" FCFLAGS="-O2 -march=i686 -pipe" FEATURES="assume-digests binpkg-logs cgroup config-protect-if-modified distlocks downgrade-backup ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FETCHCOMMAND="wget -t 3 -T 60 --passive-ftp -O "${DISTDIR}/${FILE}" "${URI}"" FETCHCOMMAND_RSYNC="rsync -avP "${URI}" "${DISTDIR}/${FILE}"" FETCHCOMMAND_SFTP="bash -c "x=\${2#sftp://} ; host=\${x%%/*} ; port=\${host##*:} ; host=\${host%:*} ; [[ \${host} = \${port} ]] && port= ; eval \"declare -a ssh_opts=(\${3})\" ; exec sftp \${port:+-P \${port}} \"\${ssh_opts[@]}\" \"\${host}:/\${x#*/}\" \"\$1\"" sftp "${DISTDIR}/${FILE}" "${URI}" "${PORTAGE_SSH_OPTS}"" FETCHCOMMAND_SSH="bash -c "x=\${2#ssh://} ; host=\${x%%/*} ; port=\${host##*:} ; host=\${host%:*} ; [[ \${host} = \${port} ]] && port= ; exec rsync --rsh=\"ssh \${port:+-p\${port}} \${3}\" -avP \"\${host}:/\${x#*/}\" \"\$1\"" rsync "${DISTDIR}/${FILE}" "${URI}" "${PORTAGE_SSH_OPTS}"" FFLAGS="-O2 -march=i686 -pipe" GCC_SPECS="" GENTOO_MIRRORS=" https://mirror.deutschmann.io/gentoo/ http://ftp.uni-erlangen.de/pub/mirrors/gentoo/ http://mirror.netcologne.de/gentoo/ http://ftp.halifax.rwth-aachen.de/gentoo/ http://mirror.deutschmann.io/gentoo/ http://ftp.uni-kl.de/pub/linux/gentoo/ http://distfiles.gentoo.org" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-32 pc" GSETTINGS_BACKEND="dconf" HISTFILESIZE="10000" HISTSIZE="10000" HISTTIMEFORMAT="[[36m%F %T[m]: " HOME="/root" INFOPATH="/usr/share/gcc-data/i686-pc-linux-gnu/6.4.0/info:/usr/share/binutils-data/i686-pc-linux-gnu/2.29.1/info:/usr/share/info" INPUT_DEVICES="libinput keyboard mouse" IUSE_IMPLICIT="abi_x86_32 prefix prefix-chain prefix-guest" KERNEL="linux" L10N="en en-US de de-DE" LADSPA_PATH="/usr/lib/ladspa" LANG="en_US.UTF-8" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LC_ALL="en_US.UTF-8" LC_MESSAGES="C" LC_PAPER="de_DE.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LESS="-R -M --shift 5" LESSCOLOR="yes" LESSCOLORIZER="pygmentize" LESSOPEN="|lesspipe %s" LIBDIR_x86="lib" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en de" LOGNAME="root" LS_COLORS="rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arc=01;31:*.arj=01;31:*.taz=01;31:*.lha=01;31:*.lz4=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.tzo=01;31:*.t7z=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lrz=01;31:*.lz=01;31:*.lzo=01;31:*.xz=01;31:*.zst=01;31:*.tzst=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.alz=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.cab=01;31:*.wim=01;31:*.swm=01;31:*.dwm=01;31:*.esd=01;31:*.jpg=01;35:*.jpeg=01;35:*.mjpg=01;35:*.mjpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.webm=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.ogv=01;35:*.ogx=01;35:*.cfg=00;32:*.conf=00;32:*.diff=00;32:*.doc=00;32:*.ini=00;32:*.log=00;32:*.patch=00;32:*.pdf=00;32:*.ps=00;32:*.tex=00;32:*.txt=00;32:*.aac=00;36:*.au=00;36:*.flac=00;36:*.m4a=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.oga=00;36:*.opus=00;36:*.spx=00;36:*.xspf=00;36:" MAIL="/var/mail/root" MAKEOPTS="--jobs 5 --load-average 7.95" MANPATH="/usr/share/gcc-data/i686-pc-linux-gnu/6.4.0/man:/usr/share/binutils-data/i686-pc-linux-gnu/2.29.1/man:/usr/lib/llvm/5/share/man:/usr/local/share/man:/usr/share/man:/usr/share/rust-1.25.0/man:/usr/share/rust-bin-1.25.0/man:/usr/lib/erlang/man" MULTILIB_ABIS="x86" NETBEANS="apisupport cnd groovy gsf harness ide identity j2ee java mobility nb php profiler soa visualweb webcommon websvccommon xml" NGINX_MODULES_HTTP="access auth_basic autoindex browser charset empty_gif fancyindex fastcgi gzip gzip_static limit_conn limit_req map referer rewrite sub syslog proxy" NOCOLOR="true" OFFICE_IMPLEMENTATION="libreoffice" OLDPWD="/root" OPENCL_PROFILE="mesa" OPENGL_PROFILE="xorg-x11" PAGER="/usr/bin/less" PATH="/usr/i686-pc-linux-gnu/gcc-bin/6.4.0:/usr/lib/llvm/5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin" PHP_TARGETS="php5-6 php7-0" PKGDIR="/usr/portage/packages" PORTAGE_ARCHLIST="alpha amd64 amd64-fbsd amd64-linux arm arm-linux arm64 arm64-linux hppa ia64 m68k m68k-mint mips ppc ppc-aix ppc-macos ppc64 ppc64-linux s390 sh sparc sparc-solaris sparc64-solaris x64-cygwin x64-macos x64-solaris x86 x86-cygwin x86-fbsd x86-linux x86-macos x86-solaris x86-winnt" PORTAGE_BIN_PATH="/usr/lib/portage/python3.5" PORTAGE_COMPRESS_EXCLUDE_SUFFIXES="css gif htm[l]? jp[e]?g js pdf png" PORTAGE_CONFIGROOT="/" PORTAGE_DEBUG="0" PORTAGE_DEPCACHEDIR="/var/cache/edb/dep" PORTAGE_ELOG_CLASSES="warn error info log qa" PORTAGE_ELOG_MAILFROM="portage@localhost" PORTAGE_ELOG_MAILSUBJECT="[portage] ebuild log for ${PACKAGE} on ${HOST}" PORTAGE_ELOG_MAILURI="root" PORTAGE_ELOG_SYSTEM="save" PORTAGE_FETCH_CHECKSUM_TRY_MIRRORS="5" PORTAGE_FETCH_RESUME_MIN_SIZE="350K" PORTAGE_GID="250" PORTAGE_GPG_SIGNING_COMMAND="gpg --sign --digest-algo SHA256 --clearsign --yes --default-key "${PORTAGE_GPG_KEY}" --homedir "${PORTAGE_GPG_DIR}" "${FILE}"" PORTAGE_INST_GID="0" PORTAGE_INST_UID="0" PORTAGE_INTERNAL_CALLER="1" PORTAGE_OVERRIDE_EPREFIX="" PORTAGE_PYM_PATH="/usr/lib/python3.5/site-packages" PORTAGE_PYTHONPATH="/usr/lib/python3.5/site-packages" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_RSYNC_RETRIES="-1" PORTAGE_SYNC_STALE="30" PORTAGE_TMPDIR="/var/tmp" PORTAGE_VERBOSE="1" PORTAGE_WORKDIR_MODE="0700" PORTAGE_XATTR_EXCLUDE="btrfs.* security.evm security.ima security.selinux system.nfs4_acl user.apache_handler user.Beagle.* user.dublincore.* user.mime_encoding user.xdg.*" PORT_LOGDIR_CLEAN="find "${PORT_LOGDIR}" -type f ! -name "summary.log*" -mtime +7 -delete" POSTGRES_TARGETS="postgres9_5" PROFILE_ONLY_VARIABLES="ARCH ELIBC IUSE_IMPLICIT KERNEL USERLAND USE_EXPAND_IMPLICIT USE_EXPAND_UNPREFIXED USE_EXPAND_VALUES_ARCH USE_EXPAND_VALUES_ELIBC USE_EXPAND_VALUES_KERNEL USE_EXPAND_VALUES_USERLAND" PWD="/tmp/stable" PYTHONDONTWRITEBYTECODE="1" PYTHON_SINGLE_TARGET="python3_5" PYTHON_TARGETS="python2_7 python3_5" QT_GRAPHICSSYSTEM="raster" RESUMECOMMAND="wget -c -t 3 -T 60 --passive-ftp -O "${DISTDIR}/${FILE}" "${URI}"" RESUMECOMMAND_RSYNC="rsync -avP "${URI}" "${DISTDIR}/${FILE}"" RESUMECOMMAND_SSH="bash -c "x=\${2#ssh://} ; host=\${x%%/*} ; port=\${host##*:} ; host=\${host%:*} ; [[ \${host} = \${port} ]] && port= ; exec rsync --rsh=\"ssh \${port:+-p\${port}} \${3}\" -avP \"\${host}:/\${x#*/}\" \"\$1\"" rsync "${DISTDIR}/${FILE}" "${URI}" "${PORTAGE_SSH_OPTS}"" ROOT="/" ROOTPATH="/usr/i686-pc-linux-gnu/gcc-bin/6.4.0:/usr/lib/llvm/5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin" RPMDIR="/usr/portage/rpm" RUBY_TARGETS="ruby22 ruby23" SHELL="/bin/bash" SHLVL="2" SSH_AUTH_SOCK="/tmp/ssh-MEoW0WzouT/agent.4892" SSH_CLIENT="fd00::6814:c4c5:967b:b2e5 50131 22" SSH_CONNECTION="fd00::6814:c4c5:967b:b2e5 50131 fd00::996f:367b:27c7:f781 22" SSH_TTY="/dev/pts/0" TERM="tmux-256color" TMUX="/tmp/tmux-0/default,4924,0" TMUX_PANE="%1" TWISTED_DISABLE_WRITING_OF_PLUGIN_CACHE="1" UNINSTALL_IGNORE="/lib/modules/* /var/run /var/lock" USE="acl berkdb bzip2 cli crypt cxx dri fortran gdbm gnutls iconv idn ipv6 modules ncurses nls nptl openmp pam pcre readline seccomp ssl tcpd test threads unicode x86 xattr zlib" ABI_X86="32" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon plan sheets stage words" COLLECTD_PLUGINS="df load rrdtool syslog threshold" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-32 pc" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" L10N="en en-US de de-DE" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" NGINX_MODULES_HTTP="access auth_basic autoindex browser charset empty_gif fancyindex fastcgi gzip gzip_static limit_conn limit_req map referer rewrite sub syslog proxy" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-0" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python3_5" PYTHON_TARGETS="python2_7 python3_5" RUBY_TARGETS="ruby22 ruby23" USERLAND="GNU" VIDEO_CARDS="vmware" XTABLES_ADDONS="geoip" USER="root" USERLAND="GNU" USE_EXPAND="ABI_MIPS ABI_PPC ABI_S390 ABI_X86 ALSA_CARDS APACHE2_MODULES APACHE2_MPMS CALLIGRA_EXPERIMENTAL_FEATURES CALLIGRA_FEATURES CAMERAS COLLECTD_PLUGINS CPU_FLAGS_ARM CPU_FLAGS_X86 CURL_SSL ELIBC ENLIGHTENMENT_MODULES FFTOOLS GPSD_PROTOCOLS GRUB_PLATFORMS INPUT_DEVICES KERNEL L10N LCD_DEVICES LIBREOFFICE_EXTENSIONS LIRC_DEVICES LLVM_TARGETS MONKEYD_PLUGINS NETBEANS_MODULES NGINX_MODULES_HTTP NGINX_MODULES_MAIL NGINX_MODULES_STREAM OFED_DRIVERS OFFICE_IMPLEMENTATION OPENMPI_FABRICS OPENMPI_OFED_FEATURES OPENMPI_RM PHP_TARGETS POSTGRES_TARGETS PYTHON_SINGLE_TARGET PYTHON_TARGETS QEMU_SOFTMMU_TARGETS QEMU_USER_TARGETS ROS_MESSAGES RUBY_TARGETS SANE_BACKENDS USERLAND UWSGI_PLUGINS VIDEO_CARDS VOICEMAIL_STORAGE XFCE_PLUGINS XTABLES_ADDONS" USE_EXPAND_HIDDEN="ABI_MIPS ABI_PPC ABI_S390 ABI_X86 CPU_FLAGS_ARM ELIBC KERNEL USERLAND" USE_EXPAND_IMPLICIT="ARCH ELIBC KERNEL USERLAND" USE_EXPAND_UNPREFIXED="ARCH" USE_EXPAND_VALUES_ARCH="alpha amd64 amd64-fbsd amd64-linux arm arm-linux arm64 hppa ia64 m68k m68k-mint mips ppc ppc64 ppc64-linux ppc-aix ppc-macos s390 sh sparc sparc64-solaris sparc-solaris x64-cygwin x64-macos x64-solaris x86 x86-cygwin x86-fbsd x86-linux x86-macos x86-solaris x86-winnt" USE_EXPAND_VALUES_ELIBC="AIX bionic Cygwin Darwin DragonFly FreeBSD glibc HPUX Interix mingw mintlib musl NetBSD OpenBSD SunOS uclibc Winnt" USE_EXPAND_VALUES_KERNEL="AIX Darwin FreeBSD freemint HPUX linux NetBSD OpenBSD SunOS Winnt" USE_EXPAND_VALUES_USERLAND="BSD GNU" USE_ORDER="env:pkg:conf:defaults:pkginternal:repo:env.d" VIDEO_CARDS="vmware" XDG_CONFIG_DIRS="/etc/xdg" XDG_DATA_DIRS="/usr/local/share:/usr/share" XTABLES_ADDONS="geoip"
I began working on this (on 0.10.8), but it's big work. It involves going through the CI dependencies at https://github.com/pydata/xarray/blob/master/ci/requirements-py36.yml , adding relevant ones and bumping them (many of them need bumping). Ongoing work...
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0cc5959f5c00de999089760d82089212192fcfe3 commit 0cc5959f5c00de999089760d82089212192fcfe3 Author: Virgil Dupras <vdupras@gentoo.org> AuthorDate: 2018-08-23 19:01:07 +0000 Commit: Virgil Dupras <vdupras@gentoo.org> CommitDate: 2018-08-23 19:06:37 +0000 dev-python/xarray: fix tests Bug: https://bugs.gentoo.org/656876 Package-Manager: Portage-2.3.47, Repoman-2.3.10 dev-python/xarray/files/xarray-0.10.8-skip-broken-test.patch | 12 ++++++++++++ dev-python/xarray/xarray-0.10.8.ebuild | 12 +++++++++--- 2 files changed, 21 insertions(+), 3 deletions(-)
Thomas, would you mind re-running tests on xarray 0.10.8 and see if they work better?
Created attachment 544706 [details] xarray-0.10.8-build.log xarray-0.10.8 has also test failures.
This look like the error I was getting at first, which is caused by a too old version of dev-python/bottleneck. Didn't emerging the new xarray version made you update dask to 18.2 which made you update pandas to 0.23.4 which made you update bottleneck to 1.2.1?
No: > Calculating dependencies... done! > [ebuild N ] dev-python/cython-0.25.2::gentoo USE="-doc -emacs {-test}" PYTHON_TARGETS="python2_7 python3_6 -python3_4 -python3_5" 0 KiB > [ebuild N ] dev-python/python-dateutil-2.7.2-r1::gentoo USE="{-test}" PYTHON_TARGETS="python2_7 python3_6 (-pypy) (-pypy3) -python3_4 -python3_5 (-python3_7)" 292KiB > [ebuild N ] dev-python/numexpr-2.6.1::gentoo USE="-mkl" PYTHON_TARGETS="python2_7 python3_6 -python3_4 -python3_5" 89 KiB > [ebuild N ] dev-lang/swig-3.0.12::gentoo USE="pcre -ccache -doc" 0 KiB > [ebuild N ] sci-libs/arpack-3.1.5::gentoo USE="-doc -examples -mpi -static-libs" 1,481 KiB > [ebuild N ] sci-libs/scipy-0.19.1::gentoo USE="-doc -sparse {-test}" PYTHON_TARGETS="python2_7 python3_6 -python3_4 -python3_5" 13,754 KiB > [ebuild N ] dev-python/bottleneck-1.0.0::gentoo PYTHON_TARGETS="python2_7 python3_6 -python3_4 -python3_5" 355 KiB > [ebuild N ] dev-python/pandas-0.19.1::gentoo USE="(-X) -doc -full-support -minimal {-test}" PYTHON_TARGETS="python2_7 python3_6 -python3_4 -python3_5" 8,165 KiB > [ebuild N ~] dev-python/xarray-0.10.8::gentoo USE="{test}" PYTHON_TARGETS="python2_7 python3_6 -python3_4 -python3_5" 1,593 KiB > > Total: 9 packages (9 new), Size of downloads: 25,726 KiB And no dask installed. I now manually upgraded to bottleneck-1.2.1 and panda-0.23.4 but it doesn't look good: [...] xarray/tests/test_dataarray.py::test_rolling_reduce[std-2-3-False-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-None-True-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-None-True-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-None-False-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-None-False-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-1-True-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-1-True-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-1-False-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-1-False-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-2-True-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-2-True-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-2-False-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-2-False-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-3-True-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-3-True-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-3-False-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-3-3-False-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-None-True-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-None-True-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-None-False-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-None-False-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-1-True-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-1-True-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-1-False-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-1-False-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-2-True-1] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-2-True-2] FAILED xarray/tests/test_dataarray.py::test_rolling_reduce[std-4-2-False-1] FAILED [...]
I'v just bumped xarray to 0.12.1. On my side, tests pass fine. How do they fare on yours?
ping
0.12.1 passed tests on my x86 box.