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Bug 631876 - sci-mathematics/Macaulay2-1.8.2.1-r1: Compile error: Error: bad register name
Summary: sci-mathematics/Macaulay2-1.8.2.1-r1: Compile error: Error: bad register name
Status: RESOLVED WONTFIX
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: x86 Linux
: Normal normal (vote)
Assignee: Gentoo Science Mathematics related packages
URL:
Whiteboard:
Keywords: PMASKED
Depends on:
Blocks: 576692
  Show dependency tree
 
Reported: 2017-09-23 22:11 UTC by Thomas Deutschmann
Modified: 2020-01-12 17:43 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,317.30 KB, text/plain)
2017-09-23 22:11 UTC, Thomas Deutschmann
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Thomas Deutschmann gentoo-dev Security 2017-09-23 22:11:08 UTC
Created attachment 496190 [details]
build.log

libtool: compile:  ../mpn/m4-ccas --m4=m4 i686-pc-linux-gnu-gcc -c -DHAVE_CONFIG_H -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/usr-host/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/memtailor/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathic/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathicgb/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/usr-host/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/memtailor/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathic/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathicgb/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/usr-host/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/memtailor/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathic/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathicgb/src -I/usr/include/frobby -I/usr/local/include/libxml2 -I/usr/include/libxml2 -I/usr/include/frobby -DNDEBUG -I/usr/local/include/libxml2 -I/usr/include/libxml2 -I/usr/include/frobby -DNDEBUG -I/usr/local/include/libxml2 -I/usr/include/libxml2 -I/usr/include/frobby -DNDEBUG -pipe -march=ivybridge -mtune=ivybridge -mno-xsaveopt -O2 -D__GMP_WITHIN_GMP -I.. -DOPERATION_mul_1 -I. -I.. mul_1.asm  -fPIC -DPIC -o .libs/mul_1.o
m4  -DHAVE_CONFIG_H -DNDEBUG -DNDEBUG -DNDEBUG -D__GMP_WITHIN_GMP -DOPERATION_mul_1 -DPIC mul_1.asm >tmp-mul_1.s
 i686-pc-linux-gnu-gcc -c -DHAVE_CONFIG_H -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/usr-host/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/memtailor/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathic/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathicgb/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/usr-host/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/memtailor/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathic/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathicgb/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/usr-host/include -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/memtailor/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathic/src -I/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/submodules/mathicgb/src -I/usr/include/frobby -I/usr/local/include/libxml2 -I/usr/include/libxml2 -I/usr/include/frobby -DNDEBUG -I/usr/local/include/libxml2 -I/usr/include/libxml2 -I/usr/include/frobby -DNDEBUG -I/usr/local/include/libxml2 -I/usr/include/libxml2 -I/usr/include/frobby -DNDEBUG -pipe -march=ivybridge -mtune=ivybridge -mno-xsaveopt -O2 -D__GMP_WITHIN_GMP -I.. -DOPERATION_mul_1 -I. -I.. tmp-mul_1.s -fPIC -DPIC -o .libs/mul_1.o
tmp-mul_1.s: Assembler messages:
tmp-mul_1.s:48: Error: bad register name `%rsi)'
tmp-mul_1.s:49: Error: bad register name `%rdx'
tmp-mul_1.s:51: Error: bad register name `%r11'
tmp-mul_1.s:52: Error: bad register name `%rsi'
tmp-mul_1.s:53: Error: bad register name `%rdi'
tmp-mul_1.s:54: Error: bad register name `%rdx'
tmp-mul_1.s:55: Error: bad register name `%rcx'
tmp-mul_1.s:57: Error: bad register name `%rax'
tmp-mul_1.s:59: Error: bad register name `%rsi'
tmp-mul_1.s:61: Error: bad register name `%rdx'
tmp-mul_1.s:63: Error: bad register name `%r11'
tmp-mul_1.s:65: Error: bad register name `%r12'
tmp-mul_1.s:68: Error: bad register name `%r10'
tmp-mul_1.s:69: Error: bad register name `%rcx'
tmp-mul_1.s:70: Error: bad register name `%r8'
tmp-mul_1.s:71: Error: bad register name `%rax'
tmp-mul_1.s:72: Error: bad register name `%rdx'
tmp-mul_1.s:73: Error: bad register name `%rsi'
tmp-mul_1.s:74: Error: bad register name `%rcx'
tmp-mul_1.s:75: Error: bad register name `%r9'
tmp-mul_1.s:76: Error: bad register name `%rax'
tmp-mul_1.s:77: Error: bad register name `%r12d'
tmp-mul_1.s:78: Error: bad register name `%rdx'
tmp-mul_1.s:79: Error: bad register name `%rsi'
tmp-mul_1.s:80: Error: bad register name `%r8'
tmp-mul_1.s:81: Error: bad register name `%r9'
tmp-mul_1.s:82: Error: bad register name `%rcx'
tmp-mul_1.s:83: Error: bad register name `%r10'
tmp-mul_1.s:84: Error: bad register name `%rax'
tmp-mul_1.s:85: Error: bad register name `%rdx'
tmp-mul_1.s:86: Error: bad register name `%rsi'
tmp-mul_1.s:87: Error: bad register name `%rcx'
tmp-mul_1.s:88: Error: bad register name `%r12'
tmp-mul_1.s:89: Error: bad register name `%rax'
tmp-mul_1.s:90: Error: bad register name `%rdx'
tmp-mul_1.s:91: Error: bad register name `%r11'
tmp-mul_1.s:92: Error: bad register name `%rsi'
tmp-mul_1.s:95: Error: bad register name `%r10'
tmp-mul_1.s:96: Error: bad register name `%rcx'
tmp-mul_1.s:97: Error: bad register name `%r8'
tmp-mul_1.s:98: Error: bad register name `%rax'
tmp-mul_1.s:99: Error: bad register name `%rdx'
tmp-mul_1.s:100: Error: bad register name `%r11'
tmp-mul_1.s:104: Error: bad register name `%rsi)'
tmp-mul_1.s:105: Error: bad register name `%rcx'
tmp-mul_1.s:106: Error: bad register name `%r9'
tmp-mul_1.s:107: Error: bad register name `%rax'
tmp-mul_1.s:108: Error: bad register name `%r12d'
tmp-mul_1.s:109: Error: bad register name `%rdx'
tmp-mul_1.s:110: Error: bad register name `%rsi)'
tmp-mul_1.s:111: Error: bad register name `%r8'
tmp-mul_1.s:112: Error: bad register name `%r9'
tmp-mul_1.s:113: Error: bad register name `%rcx'
tmp-mul_1.s:114: Error: bad register name `%r10'
tmp-mul_1.s:115: Error: bad register name `%rax'
tmp-mul_1.s:116: Error: bad register name `%rdx'
tmp-mul_1.s:117: Error: bad register name `%rsi)'
tmp-mul_1.s:118: Error: bad register name `%rcx'
tmp-mul_1.s:119: Error: bad register name `%r12'
tmp-mul_1.s:120: Error: bad register name `%rax'
tmp-mul_1.s:121: Error: bad register name `%rdx'
tmp-mul_1.s:122: Error: bad register name `%r8'
tmp-mul_1.s:124: Error: bad register name `%rsp)'
tmp-mul_1.s:125: Error: bad register name `%r9'
tmp-mul_1.s:127: Error: bad register name `%rsi)'
tmp-mul_1.s:128: Error: bad register name `%rcx'
tmp-mul_1.s:129: Error: bad register name `%r9'
tmp-mul_1.s:130: Error: bad register name `%rax'
tmp-mul_1.s:131: Error: bad register name `%r12d'
tmp-mul_1.s:132: Error: bad register name `%rdx'
tmp-mul_1.s:133: Error: bad register name `%rsi)'
tmp-mul_1.s:134: Error: bad register name `%r8'
tmp-mul_1.s:136: Error: bad register name `%rcx'
tmp-mul_1.s:137: Error: bad register name `%r10'
tmp-mul_1.s:138: Error: bad register name `%rax'
tmp-mul_1.s:139: Error: bad register name `%rdx'
tmp-mul_1.s:140: Error: bad register name `%r12'
tmp-mul_1.s:142: Error: bad register name `%rsp)'
tmp-mul_1.s:143: Error: bad register name `%r8'
tmp-mul_1.s:146: Error: bad register name `%rsi)'
tmp-mul_1.s:147: Error: bad register name `%rcx'
tmp-mul_1.s:148: Error: bad register name `%r9'
tmp-mul_1.s:149: Error: bad register name `%rax'
tmp-mul_1.s:150: Error: bad register name `%r12d'
tmp-mul_1.s:151: Error: bad register name `%rdx'
tmp-mul_1.s:152: Error: bad register name `%r10'
tmp-mul_1.s:154: Error: bad register name `%r12'
tmp-mul_1.s:155: Error: bad register name `%rsp)'
tmp-mul_1.s:157: Error: bad register name `%rcx'
tmp-mul_1.s:158: Error: bad register name `%rax'
tmp-mul_1.s:160: Error: bad register name `%rdx'
tmp-mul_1.s:162: Error: bad register name `%r9'
tmp-mul_1.s:164: Error: bad register name `%rsp)'
tmp-mul_1.s:165: Error: bad register name `%r10'
make[5]: *** [Makefile:624: mul_1.lo] Error 1
make[5]: Leaving directory '/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/libraries/mpir/build/mpir-2.6.0/mpn'
make[4]: *** [Makefile:801: all-recursive] Error 1
make[4]: Leaving directory '/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/libraries/mpir/build/mpir-2.6.0'
make[3]: *** [Makefile:615: all] Error 2
make[3]: Leaving directory '/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/libraries/mpir/build/mpir-2.6.0'
make[2]: *** [../Makefile.library:155: .compiled-2.6.0] Error 2
make[2]: Leaving directory '/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/libraries/mpir'
make[1]: *** [Makefile:7: all-in-mpir] Error 2
make[1]: Leaving directory '/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2/libraries'
make: *** [GNUmakefile:144: all-in-libraries] Error 2
make: Leaving directory '/var/tmp/portage/sci-mathematics/Macaulay2-1.8.2.1-r1/work/M2/M2'
 * ERROR: sci-mathematics/Macaulay2-1.8.2.1-r1::gentoo failed (compile phase):
 *   emake failed
Comment 1 Thomas Deutschmann gentoo-dev Security 2017-09-23 22:11:23 UTC
Portage 2.3.8 (python 3.4.5-final-0, default/linux/x86/13.0, gcc-5.4.0, glibc-2.23-r4, 4.12.12-gentoo i686)
=================================================================
System uname: Linux-4.12.12-gentoo-i686-Intel-R-_Core-TM-_i7-3770K_CPU_@_3.50GHz-with-gentoo-2.3
KiB Mem:     3108120 total,   2337104 free
KiB Swap:     488276 total,    488276 free
Timestamp of repository gentoo: Sat, 23 Sep 2017 15:47:43 +0000
Head commit of repository gentoo: 751d60d0f1fdee1f8c56f1c4dbfc324022e7ddbd

sh bash 4.3_p48-r1
ld GNU ld (Gentoo 2.28.1 p1.0) 2.28.1
app-shells/bash:          4.3_p48-r1::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.24.1-r2::gentoo
dev-lang/python:          2.7.12::gentoo, 3.4.5::gentoo
dev-util/cmake:           3.7.2::gentoo
dev-util/pkgconfig:       0.28-r2::gentoo
sys-apps/baselayout:      2.3::gentoo
sys-apps/openrc:          0.28::gentoo
sys-apps/sandbox:         2.10-r3::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69::gentoo
sys-devel/automake:       1.15-r2::gentoo
sys-devel/binutils:       2.28-r2::gentoo, 2.28.1::gentoo
sys-devel/gcc:            5.4.0-r3::gentoo
sys-devel/gcc-config:     1.7.3::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.4::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r4::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/gentoo.git
    priority: -1000

ABI="x86"
ABI_X86="32"
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="* -@EULA"
ACCEPT_PROPERTIES="*"
ACCEPT_RESTRICT="*"
ANT_HOME="/usr/share/ant"
ARCH="x86"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=ivybridge -mtune=ivybridge -mno-xsaveopt"
CHOST="i686-pc-linux-gnu"
CHOST_x86="i686-pc-linux-gnu"
COLLISION_IGNORE="/lib/modules/* *.py[co] *$py.class */dropin.cache"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /var/bind"
CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3"
CXXFLAGS="-O2 -pipe -march=ivybridge -mtune=ivybridge -mno-xsaveopt"
DEFAULT_ABI="x86"
EDITOR="/usr/bin/mcedit"
ELIBC="glibc"
EPREFIX=""
EROOT="/"
FACTERDIR="/usr/lib"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-logs cgroup config-protect-if-modified distlocks downgrade-backup ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -march=i686 -pipe"
GCC_SPECS=""
GRUB_PLATFORMS="efi-32 pc"
GSETTINGS_BACKEND="dconf"
HOME="/root"
INFOPATH="/usr/share/info:/usr/share/gcc-data/i686-pc-linux-gnu/5.4.0/info:/usr/share/binutils-data/i686-pc-linux-gnu/2.28.1/info"
INPUT_DEVICES="libinput keyboard mouse"
IUSE_IMPLICIT="abi_x86_32 prefix prefix-chain prefix-guest"
JAVAC="/etc/java-config-2/current-system-vm/bin/javac"
JAVA_HOME="/etc/java-config-2/current-system-vm"
JDK_HOME="/etc/java-config-2/current-system-vm"
KERNEL="linux"
L10N="en en-US de de-DE"
LANG="en_US.UTF-8"
LC_ALL="en_US.UTF-8"
LC_MESSAGES="C"
LC_PAPER="de_DE.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LIBDIR_x86="lib"
LINGUAS="en de"
LOGNAME="root"
MAIL="/var/mail/root"
MAKEOPTS="--jobs 5 --load-average 7.95"
MULTILIB_ABIS="x86"
MULTIOSDIRS="../lib"
NOCOLOR="true"
OFFICE_IMPLEMENTATION="libreoffice"
OLDPWD="/root"
OPENGL_PROFILE="xorg-x11"
PAGER="/usr/bin/less"
PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/i686-pc-linux-gnu/gcc-bin/5.4.0"
PHP_TARGETS="php5-6"
POSTGRES_TARGETS="postgres9_5"
PWD="/usr/portage/media-video"
PYTHONDONTWRITEBYTECODE="1"
PYTHON_SINGLE_TARGET="python3_4"
PYTHON_TARGETS="python2_7 python3_4"
ROOT="/"
ROOTPATH="/opt/bin:/usr/i686-pc-linux-gnu/gcc-bin/5.4.0"
RUBY_TARGETS="ruby22"
SHELL="/bin/bash"
SHLVL="2"
SSH_TTY="/dev/pts/0"
TERM="screen"
TMUX="/tmp/tmux-0/default,4589,0"
TMUX_PANE="%1"
TWISTED_DISABLE_WRITING_OF_PLUGIN_CACHE="1"
USER="root"
USERLAND="GNU"
VIDEO_CARDS="intel"
Comment 2 Larry the Git Cow gentoo-dev 2019-12-07 23:50:08 UTC
The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e38c4220a19d1fb89f091f49c10fd0b0402773e2

commit e38c4220a19d1fb89f091f49c10fd0b0402773e2
Author:     David Seifert <soap@gentoo.org>
AuthorDate: 2019-12-07 23:49:08 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2019-12-07 23:49:08 +0000

    profiles: Mask sci-mathematics/Macaulay2 for removal
    
    Bug: https://bugs.gentoo.org/345233
    Bug: https://bugs.gentoo.org/459640
    Bug: https://bugs.gentoo.org/474782
    Bug: https://bugs.gentoo.org/474784
    Bug: https://bugs.gentoo.org/474788
    Bug: https://bugs.gentoo.org/474790
    Bug: https://bugs.gentoo.org/474792
    Bug: https://bugs.gentoo.org/620942
    Bug: https://bugs.gentoo.org/631876
    Bug: https://bugs.gentoo.org/671130
    Signed-off-by: David Seifert <soap@gentoo.org>

 profiles/package.mask | 7 +++++++
 1 file changed, 7 insertions(+)