When syncing through rsync, sys-fs/zfs/Manifest has no entries for EBUILD or AUX, only DIST entries. This started some time in the last 24 hours. Manifests for other packages are fine. Reproducible: Always Actual Results: $ equery list -p -o zfs * Searching for zfs ... * Missing digest for '/usr/portage/sys-fs/zfs/zfs-0.6.5.2-r1.ebuild' * Missing digest for '/usr/portage/sys-fs/zfs/zfs-9999.ebuild' [-P-] [ ] sys-fs/zfs-0.6.0_rc13-r2:0 [-P-] [ ] sys-fs/zfs-0.6.0_rc14-r1:0 [-P-] [ ] sys-fs/zfs-0.6.1-r4:0 [-P-] [ ] sys-fs/zfs-0.6.2-r5:0 [-P-] [ ] sys-fs/zfs-0.6.3-r2:0 [-P-] [ ] sys-fs/zfs-0.6.4.2:0 [IP-] [ ] sys-fs/zfs-0.6.5.2-r1:0 $ cat /usr/portage/sys-fs/zfs/Manifest DIST zfs-0.6.0-rc14.tar.gz 1527612 SHA256 5eae8ef790b26e0dd7c801cc0a235a631ad91d67f148a444d912dbeb24b9a12d SHA512 ad38544ced150ce500c78507782e53a8534815b819e5b9aefda6d670fb7905e31a42cdb4d45164700df48673ea7c42bd1d29a60f1f00e25271b3906de9212d15 WHIRLPOOL cfd4de541eb6c18ee4df8950883525d1b1887e0d9c5f840d97353a5d716ed639f1ab3dc0fe4d8368a890564f10053026bcc738b6066c4488647f1b83be54288d DIST zfs-0.6.1.tar.gz 1535521 SHA256 42ed127f74af0ecafc14800a5d2b766655f5ea821098aba92446c1c447093fad SHA512 ef583639f15a5b2e4582760bb013ab5091abc15bae17884d811afec707aff337248102a22fb9fb6f62f99cb3477a8ae82edfdcfdfb962276f593173a5dfe5871 WHIRLPOOL a6791fc2d384e03073abc850f99ba761afd18073337264d8a7bc08b4ddc6fff52df5ce11addc9a3ac7cdfdd9ce9bd779208e515cda631ec19de05fbf9f92307b DIST zfs-0.6.2.tar.gz 1558656 SHA256 91b844bf7a42df22d7533e8004289270b7859b8fcbca3bff8087a79b131318b4 SHA512 008f9decdea3e92f6d74f5369ec9df5776b15efbb9f2bc01012999b71e1f2bc5b46b310a329b60545907dcc78773ec79eb6d21aca49d911f33299fd0a36e1a4b WHIRLPOOL 587279866b6ffa2bfebc91f00cb28de85f7f186426a0292f44c6cde7ca3a51c1911fc0ee431c25c3ee0866174522f90ce04b54de4aa3dc0829ba3a719e47af58 DIST zfs-0.6.3-patches-r1.tar.xz 87852 SHA256 71b5286f77cb6a6c2b97cee406dfd4788f7b40b6675c4a56fc630a47e90d5280 SHA512 e2fa573c7b30a3811e9e1596d35b65f5d013ed5bac43e364b44ffab734398a3294979c152a80ec9a722611cc7c971aec217d8e1a37cc9240a3fa2dddb5b90e3b WHIRLPOOL f2da02d5c7d2385e7de1e858c31d299632ca864d422f0c94e5d3b8674d24beeb073ad2600698350306a9e70dbeef390f0e513d19c126502fceec18795c203d50 DIST zfs-0.6.3.tar.gz 1665270 SHA256 00caeae63cc724d3dd741aeb36fd2dc03d2158794bd6a5e925cdc8d7e5d3da8c SHA512 8c7741f5f227eb031d79fe87bf7d60e790a098fa6caede462d556c97d798832f97f5a377cbb74fc99b8d198e5f3cc1a3491f69fcdaa0408933dbadd132013416 WHIRLPOOL db9791da12c441c89667b194154b209f5aa69ea46d5327cfcde0b3a910cf1f0e5ca448909824e45b31252a1907280b711fb6ba04eb313d09de0ffbf5e6e304fe DIST zfs-0.6.4.2.tar.gz 1738601 SHA256 26af2924cbb891b79203a31827cba4cdc310162d5f7b9e2d643eb6576aa19015 SHA512 87a28997b8f9d36e189410171db583402418a55782b7b7f333993e98c5e17ccc4b6cd5825f38b904294c87e3dfdfb7748bd71cc371589c1358f16c942e0c18db WHIRLPOOL 1700de7da56311a7b608c99a821e2fa97a6145ccc88f3d8eff12f778421ba7b7b9cc5f5fbe5f1acd2ea2fd1db778c200a2ea961e3859a8fc89d80474894293f1 DIST zfs-0.6.5.2.tar.gz 1817267 SHA256 aecd2bc5189f2a71a45eb222230146bed231af4f35af5ec7af83a74987c3d595 SHA512 7f0b20feca91d5ab952c1d49ae94d241f8868825b163a3d5f2ad0fd7adcac3ab246a3e6a755019a833be553fbbfd6609828d8123f49a43b42bf76cfd64f234ec WHIRLPOOL 00fd628ef2267366b6f0705e6436ac55b260aabc3588c7f58a7042dfbfe95a0478740b4579326638d28f10ffc8f2d5b3ed21b9f8297e72344ec439fe30310634 DIST zfs-kmod-0.6.2-p4.tar.xz 63984 SHA256 9167edc4be86e3fcda6b3c198e51f92ab0c95ac5baca11666c28029a628cdac9 SHA512 13e4ec415c35d2f268d89565745f5898c0943423577a2ba6714b3a069c5a80f244cd06dff91464f38dd4ed60673d1145ead080bb03a56d4be33e328f948ffa64 WHIRLPOOL 8c399ec67119ed4fbebb5599d00f888918678bc4e4ea369b4bdc5c75bfc90fc76396087624c8011de370a54ff103bccaa8922d05ac7ccebb2b3481bbbcf44b19 $ cat /usr/portage/metadata/layout.conf # This went live Wednesday, July 4, 2012 at 10:00 UTC # For more details, please see: http://archives.gentoo.org/gentoo-dev-announce/msg_00000.xml # and/or GLEP 59. manifest-hashes = SHA256 SHA512 WHIRLPOOL # 2013-04-09 gentoo's council says to deprecate EAPIs 1 and 2 (bug #470670). # 2014-02-25 council meeting deprecated EAPIs 0 and 3. #eapis-banned = 1 eapis-deprecated = 0 1 2 3 # Bug #337853 - gentoo's council says to enable # --echangelog by default for the "gentoo" repo # INFRA NOTE 2015/08/08: No more old ChangeLogs in Git update-changelog = false # Make egencache generate newer (more reliable) # md5-dict cache format (see bug #409445). # NOTE: list md5-dict first so clients prefer it # INFRA NOTE: Format 'pms' was removed on Aug 6 2012. (Announced prior as Aug 1 # 2012 was the removal date) cache-formats = md5-dict # Support for implicit masters is deprecated, so we need to explicitly # specify that this repo does not dependent on any masters, in order # to distinguish it from repos that rely on the deprecated behavior. masters = # Use thin Manifests for Git thin-manifests = false # Sign Git commits, and NOT Manifests sign-commits = true sign-manifests = false Expected Results: Non-DIST entries should be present in the manifest. # emerge --info Portage 2.2.20.1 (python 2.7.10-final-0, default/linux/amd64/13.0, gcc-4.9.3, glibc-2.20-r2, 3.18.7-gentoo x86_64) ================================================================= System uname: Linux-3.18.7-gentoo-x86_64-Intel-R-_Core-TM-_i7_CPU_860_@_2.80GHz-with-gentoo-2.2 KiB Mem: 16532260 total, 918796 free KiB Swap: 4200892 total, 4137300 free Timestamp of repository gentoo: Sat, 10 Oct 2015 07:30:01 +0000 sh bash 4.3_p39 ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1 distcc 3.1 x86_64-pc-linux-gnu [disabled] app-shells/bash: 4.3_p39::gentoo dev-java/java-config: 2.2.0::gentoo dev-lang/perl: 5.20.2::gentoo dev-lang/python: 2.7.10::gentoo, 3.4.3::gentoo dev-util/cmake: 3.3.1-r1::gentoo dev-util/pkgconfig: 0.28-r2::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.17::gentoo sys-apps/sandbox: 2.6-r1::gentoo sys-devel/autoconf: 2.69::gentoo sys-devel/automake: 1.11.6-r1::gentoo, 1.14.1::gentoo, 1.15::gentoo sys-devel/binutils: 2.25.1-r1::gentoo sys-devel/gcc: 4.9.3::gentoo sys-devel/gcc-config: 1.7.3::gentoo sys-devel/libtool: 2.4.6::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 3.18::gentoo (virtual/os-headers) sys-libs/glibc: 2.20-r2::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 squeezebox location: /var/lib/layman/squeezebox masters: gentoo priority: 0 c-space location: /var/auto-pull/c-space-portage masters: gentoo priority: 1 r-space location: /var/auto-pull/r-space-portage masters: gentoo priority: 2 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="* -@EULA @EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /var/bind" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-march=native -O2 -pipe" DISTDIR="/usr/portage/distfiles" FCFLAGS="-march=native -O2 -pipe" FEATURES="assume-digests binpkg-logs collision-protect compress-build-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-march=native -O2 -pipe" GENTOO_MIRRORS="http://mirror.switch.ch/mirror/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://distfiles.gentoo.org/" LANG="en_US.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j9" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" USE="a52 aac acl acpi alsa amd64 apache2 audiofile avahi bash-completion bazaar berkdb bluetooth btrfs bzip2 caps cdb cdda cddb cdparanoia cdr cli cracklib crypt cryptsetup css cups curl cvs cxx dbus device-mapper dri dv dvb dvd dvdr dvdread encode exif expat fam ffmpeg firmware flac foomaticdb ftp fuse gd gdbm gif git gmp gpg iconv id3 id3tag idn imagemagick imap imlib ipv6 java jbig jpeg jpeg2k lame lcms logrotate lua lzma lzo mad maildir mbox mercurial mhash mmap mmx mmxext modules mp3 mpeg multilib ncurses netlink nfs nls nntp nptl nptlonly ogg openmp openssl opus oss pam pcre pdf perl php png ppds pthreads python quicktime readline rtc samba sasl seccomp session slang speex spell sqlite sqlite3 sse sse2 sse3 ssl ssse3 subversion tcl tcpd theora threads tiff truetype udev unicode usb v4l v4l2 vim-syntax vorbis vpx webp wmf x264 xattr xml xmp xvid zeroconf zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" APACHE2_MPMS="prefork" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7 3.4" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
*** This bug has been marked as a duplicate of bug 562708 ***
