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Bug 506680 - sci-chemistry/jmol with dev-java/oracle-jdk-bin:1.8 - javac: .../work/jmol-12.2.27/src/org/jmol/applet/ error: cannot find symbol (JSObject)
Summary: sci-chemistry/jmol with dev-java/oracle-jdk-bin:1.8 - javac: .../work/jmol-12...
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Chemistry-Related Packages
Depends on:
Reported: 2014-04-03 16:53 UTC by Viktor Yu. Kovalskii
Modified: 2019-09-14 15:53 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---

build.log (build.log,17.59 KB, text/plain)
2014-04-03 16:54 UTC, Viktor Yu. Kovalskii

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Description Viktor Yu. Kovalskii 2014-04-03 16:53:40 UTC
After upgrading and switching to dev-java/oracle-jdk-bin:1.8 emerging sci-chemistry/jmol is failed.

Reproducible: Always

Steps to Reproduce:
1. emerge -1av dev-java/oracle-jdk-bin:1.8
2. eselect java-vm set system oracle-jdk-bin-1.8
3. emerge -1av sci-chemistry/jmol

emerge --info sci-chemistry/jmol
Portage 2.2.10 (default/linux/x86/13.0, gcc-4.8.2, glibc-2.19, 3.13.7-gentoo i686)
                        System Settings
System uname: Linux-3.13.7-gentoo-i686-Intel-R-_Core-TM-_Duo_CPU_T2350_@_1.86GHz-with-gentoo-2.2
KiB Mem:     3099180 total,   1366020 free
KiB Swap:    2104508 total,   1770584 free
Timestamp of tree: Sun, 30 Mar 2014 08:00:01 +0000
ld GNU ld (GNU Binutils) 2.24
ccache version 3.1.9 [enabled]
app-shells/bash:          4.2_p45-r1
dev-java/java-config:     2.2.0
dev-lang/python:          2.7.6
dev-util/ccache:          3.1.9-r3
dev-util/pkgconfig:       0.28-r1
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.12.4
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.11.6, 1.12.6, 1.14.1
sys-devel/binutils:       2.24-r2
sys-devel/gcc:            4.8.2
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.2
sys-devel/make:           4.0-r1
sys-kernel/linux-headers: 3.13 (virtual/os-headers)
sys-libs/glibc:           2.19
Repositories: gentoo overlays-oschtan science rion flying
Installed sets: @lxde-full, @system, @toolchain
ACCEPT_LICENSE="* -@EULA PUEL skype- dlj-1.1 AdobeFlash-11.x Oracle-BCLA-JavaSE"
CFLAGS="-O2 -pipe -march=pentium-m -fomit-frame-pointer -mtune=generic -mfxsr"
CONFIG_PROTECT="/etc /usr/share/themes/oxygen-gtk/gtk-2.0 /usr/share/themes/oxygen-gtk/gtk-3.0 /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CPPFLAGS="-O2 -pipe -march=pentium-m -fomit-frame-pointer -mtune=generic -mfxsr"
CXXFLAGS="-O2 -pipe -march=pentium-m -fomit-frame-pointer -mtune=generic -mfxsr"
EMERGE_DEFAULT_OPTS="--autounmask=n --quiet-build --with-bdeps=y"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-logs buildpkg ccache collision-protect distlocks ebuild-locks fixlafiles merge-sync metadata-transfer news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -march=i686 -pipe"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTDIR_OVERLAY="/mnt/slag/layman/oschtan /mnt/slag/layman/science /mnt/slag/layman/rion /mnt/slag/layman/flying"
USE="7zip X a52 aac aalib acl acpi additions alsa amr apng archive aspell audiofile autotools bash-completion bazaar bdf bluetooth branding bzip2 cairo cdda cddb cdparanoia cdr cdrdao cdrom chardet cjk cli consolekit cracklib curl cvs cxx dbus dia divx djvu docbook dri drm dts dvd dvdnav dvi emf enca encode equalizer exceptions exif expat extensions fbcondecor fbsplash ffmpeg fftw flac fontconfig fortran ftp fuse gallium gd gecko gif gimp git gles glib glitz gmp gnutls gpm graphviz gstreamer gtk gtk3 gtkstyle harfbuzz hddtemp http iconv icu idn imagemagick imlib jabber jbig jemalloc jpeg jpeg2k lame lasi lastfm latex lcms libass libffi libnotify libsamplerate libyaml lm_sensors lqr lxde lzma lzo mad matroska mercurial mime mms mmx mmxext mng modules mp2 mp3 mp4 mpeg mplayer musepack natspec ncurses nls nptl ogg openexr opengl openmp opus orc osmesa pam pango pcre pdf plotutils png policykit postscript pulseaudio qt3support rar raw readline rtc rtf science sdl session shared-dricore shared-glapi smp sndfile speex spell sqlite sse sse2 ssl startup-notification stats subversion svg symlink syslog system-sqlite szip t1lib tcpd theora threads tiff truetype twolame udev unicode usb utils v4l vba vorbis vpx wav wavpack webdav webdav-neon webgl webp wifi wma wmf wps wxwidgets x264 x264-svn-encoder x86 xattr xcb xcomposite xml xmp xorg xpm xps xscreensaver xv xvid zip zlib" ABI_X86="32" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CURL_SSL="gnutls" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer nlpsolver pdfimport" LINGUAS="ru ru_RU" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7" RUBY_TARGETS="ruby19" USERLAND="GNU" VIDEO_CARDS="intel i915" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"

                        Package Settings

sci-chemistry/jmol-12.2.27 was built with the following:
USE="client-only -vhosts"
Comment 1 Viktor Yu. Kovalskii 2014-04-03 16:54:21 UTC
Created attachment 374176 [details]
Comment 2 William L. Thomson Jr. 2015-03-21 18:11:17 UTC
This package is not current, latest version is 13. I bet if this package was current, updated to latest release. It would not have issues with jdk 1.8. Only one way to find out. But its not surprising an older version of a package has issues with a newer jdk.
Comment 3 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2019-09-14 15:53:02 UTC
Package removed.