Compiling openimageio fails as follows: [ 91%] /usr/bin/cmake -E cmake_progress_report /var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/CMakeFiles 99 Building CXX object oiiotool/CMakeFiles/oiiotool.dir/imagerec.cpp.o cd /var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/oiiotool && /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-g++ -DUSE_FREETYPE -DUSE_OPENEXR_VERSION2=1 -DUSE_OPENSSL=1 -DUSE_TBB=0 -DNDEBUG -march=native -mmmx -msse -msse2 -msse4a -m3dnow -O2 -pipe -I/usr/include/OpenEXR -isystem /usr/include/boost-1_51 -I/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5/src/include -I/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/include -Wall -UUSE_FIELD3D -o CMakeFiles/oiiotool.dir/imagerec.cpp.o -c /var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5/src/oiiotool/imagerec.cpp [ 92%] Building CXX object oiiotool/CMakeFiles/oiiotool.dir/printinfo.cpp.o cd /var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/oiiotool && /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-g++ -DUSE_FREETYPE -DUSE_OPENEXR_VERSION2=1 -DUSE_OPENSSL=1 -DUSE_TBB=0 -DNDEBUG -march=native -mmmx -msse -msse2 -msse4a -m3dnow -O2 -pipe -I/usr/include/OpenEXR -isystem /usr/include/boost-1_51 -I/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5/src/include -I/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/include -Wall -UUSE_FIELD3D -o CMakeFiles/oiiotool.dir/printinfo.cpp.o -c /var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5/src/oiiotool/printinfo.cpp ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::start_thread()' ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::join()' collect2: error: ld returned 1 exit status igrep/CMakeFiles/igrep.dir/build.make:115: recipe for target 'igrep/igrep' failed make[2]: *** [igrep/igrep] Error 1 make[2]: Leaving directory '/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build' CMakeFiles/Makefile2:1096: recipe for target 'igrep/CMakeFiles/igrep.dir/all' failed make[1]: *** [igrep/CMakeFiles/igrep.dir/all] Error 2 ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::start_thread()' ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::join()' collect2: error: ld returned 1 exit status idiff/CMakeFiles/idiff.dir/build.make:115: recipe for target 'idiff/idiff' failed make[2]: *** [idiff/idiff] Error 1 make[2]: Leaving directory '/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build' CMakeFiles/Makefile2:1046: recipe for target 'idiff/CMakeFiles/idiff.dir/all' failed make[1]: *** [idiff/CMakeFiles/idiff.dir/all] Error 2 Linking CXX executable oiiotool cd /var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/oiiotool && /usr/bin/cmake -E cmake_link_script CMakeFiles/oiiotool.dir/link.txt --verbose=1 /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-g++ -march=native -mmmx -msse -msse2 -msse4a -m3dnow -O2 -pipe -Wl,-O1 -Wl,--as-needed CMakeFiles/oiiotool.dir/oiiotool.cpp.o CMakeFiles/oiiotool.dir/diff.cpp.o CMakeFiles/oiiotool.dir/imagerec.cpp.o CMakeFiles/oiiotool.dir/printinfo.cpp.o -o oiiotool -rdynamic -lHalf -lIex -lImath -lIlmThread -lpthread ../libOpenImageIO/libOpenImageIO.so.1.3.5 -lboost_filesystem-mt -lboost_regex-mt -lboost_system-mt -lboost_thread-mt -ldl -lssl -lcrypto -lfreetype -lHalf -lIex -lImath -lIlmThread -lpthread -lpng -lz -ltiff -ljpeg -lz -ltiff -ljpeg -lwebp -lIlmImf -lgif -lpugixml -Wl,-rpath,/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/libOpenImageIO: ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::start_thread()' ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::join()' collect2: error: ld returned 1 exit status maketx/CMakeFiles/maketx.dir/build.make:115: recipe for target 'maketx/maketx' failed make[2]: *** [maketx/maketx] Error 1 make[2]: Leaving directory '/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build' CMakeFiles/Makefile2:1196: recipe for target 'maketx/CMakeFiles/maketx.dir/all' failed make[1]: *** [maketx/CMakeFiles/maketx.dir/all] Error 2 ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::start_thread()' ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::join()' collect2: error: ld returned 1 exit status iinfo/CMakeFiles/iinfo.dir/build.make:115: recipe for target 'iinfo/iinfo' failed make[2]: *** [iinfo/iinfo] Error 1 make[2]: Leaving directory '/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build' CMakeFiles/Makefile2:1146: recipe for target 'iinfo/CMakeFiles/iinfo.dir/all' failed make[1]: *** [iinfo/CMakeFiles/iinfo.dir/all] Error 2 ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::start_thread()' ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::join()' collect2: error: ld returned 1 exit status oiiotool/CMakeFiles/oiiotool.dir/build.make:190: recipe for target 'oiiotool/oiiotool' failed make[2]: *** [oiiotool/oiiotool] Error 1 make[2]: Leaving directory '/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build' CMakeFiles/Makefile2:1246: recipe for target 'oiiotool/CMakeFiles/oiiotool.dir/all' failed make[1]: *** [oiiotool/CMakeFiles/oiiotool.dir/all] Error 2 make[1]: Leaving directory '/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build' Makefile:146: recipe for target 'all' failed make: *** [all] Error 2 * ERROR: media-libs/openimageio-1.3.5::gentoo failed (compile phase): * emake failed Here is what I get with: emerge -pqv '=media-libs/openimageio-1.3.5::gentoo' [ebuild N ] media-libs/openimageio-1.3.5 USE="gif opengl qt4 ssl truetype -colorio -jpeg2k -opencv -python -tbb" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7" Note: I have boost 1.53.0 installed.
Created attachment 367188 [details] Complete build.log
Created attachment 367190 [details] Build environment
emerge.info : Portage 2.2.7 (default/linux/amd64/13.0/desktop/kde, gcc-4.8.2, glibc-2.17, 3.12.6-gentoo x86_64) ================================================================= System Settings ================================================================= System uname: Linux-3.12.6-gentoo-x86_64-AMD_Phenom-tm-_II_X6_1100T_Processor-with-gentoo-2.2 KiB Mem: 3793456 total, 1935656 free KiB Swap: 3929084 total, 3929084 free Timestamp of tree: Sat, 04 Jan 2014 09:15:01 +0000 ld ld di GNU (GNU Binutils) 2.23.2 ccache version 3.1.9 [enabled] app-shells/bash: 4.2_p45 dev-java/java-config: 2.2.0 dev-lang/python: 2.7.6, 3.3.3 dev-util/ccache: 3.1.9-r3 dev-util/cmake: 2.8.12.1-r2 dev-util/pkgconfig: 0.28 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.12.4 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.11.6, 1.12.6, 1.14.1 sys-devel/binutils: 2.23.2 sys-devel/gcc: 4.8.2 sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.2 sys-devel/make: 4.0-r1 sys-kernel/linux-headers: 3.12 (virtual/os-headers) sys-libs/glibc: 2.17 Repositories: gentoo ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -mmmx -msse -msse2 -msse4a -m3dnow -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0 /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -mmmx -msse -msse2 -msse4a -m3dnow -O2 -pipe" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--jobs=4 --load-average=5" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs ccache config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://mirror.switch.ch/ftp/mirror/gentoo/ http://gentoo.wheel.sk/ http://mirror.ovh.net/gentoo-distfiles/ http://gentoo.mneisen.org/ http://mirrors.linuxant.fr/distfiles.gentoo.org/" LANG="it" LC_ALL="it_IT.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j6" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="" SYNC="rsync://rsync.at.gentoo.org/gentoo-portage" USE="3dnow 3dnowext X a52 aac acl acpi alsa amd64 berkdb bluetooth branding bzip2 cairo cdda cdr cleartype cli consolekit corefonts cracklib crypt cups cxx dbus declarative dri dts dvd dvdr emboss encode exif fam firefox firmware flac fortran gdbm gif gpm gtk iconv icu ipv6 jack java javascript jpeg kde kipi lcms ldap libnotify lm_sensors mad midi mmx mng modules mp3 mp4 mpeg mudflap multilib ncurses nls nptl nsplugin ogg opengl openmp pam pango pcre pdf phonon plasma png policykit ppds pulseaudio qt3support qt4 readline sdl semantic-desktop session spell sqlite sse sse2 ssl startup-notification svg tcpd threads tiff truetype type1 udev udisks unicode upower usb vorbis wxwidgets x264 xcb xcomposite xinerama xml xscreensaver xv xvid zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="it ru" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-3 php5-4" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby18 ruby20" SANE_BACKENDS="plustek" USERLAND="GNU" VIDEO_CARDS="radeon r600" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7 3.3" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
The error makes little sense: the command that builds the lib does contain libboost_thread in the place that looks proper. Check if libboost_thread contains those two symbols ('nm -C -D' probably the easiest way), if the built lib is linked to that lib and if '-j1' changes anything.
Building with -j1 doesn't change anything. How do I check if libboost_thread contains the two symbols needed? I don't understand what should I use 'nm -C -D' with; and how to check if the built lib is linked to that lib?
As for the first, it probably 'nm -C -D /usr/lib64/libboost_thread.so | less' (as the output will be quite long). As for the second, find the lib in the build dir and run 'ldd' on it.
Created attachment 367256 [details] complete output of nm -C -D /usr/lib64/libboost_thread.so | less
nm -C -D /usr/lib64/libboost_thread.so | grep join 000000000000e020 T boost::thread::join_noexcept() 000000000000e1e0 T boost::thread::do_try_join_until_noexcept(timespec const&, bool&) 000000000000d1e0 T boost::thread::joinable() const U pthread_join nm -C -D /usr/lib64/libboost_thread.so | grep start_thread 000000000000d0e0 T boost::thread::start_thread_noexcept(boost::thread_attributes const&) 000000000000d060 T boost::thread::start_thread_noexcept()
(In reply to Michele Alzetta from comment #8) > nm -C -D /usr/lib64/libboost_thread.so | grep join > 000000000000e020 T boost::thread::join_noexcept() > 000000000000e1e0 T boost::thread::do_try_join_until_noexcept(timespec > const&, bool&) > 000000000000d1e0 T boost::thread::joinable() const > U pthread_join > > nm -C -D /usr/lib64/libboost_thread.so | grep start_thread > 000000000000d0e0 T > boost::thread::start_thread_noexcept(boost::thread_attributes const&) > 000000000000d060 T boost::thread::start_thread_noexcept() ... Which version of boost is installed (and its useflags) ?
boost 1.53.0-r1 USE flags: icu nls threads -debug -doc -mpi -python -static-libs -tools
(In reply to Michele Alzetta from comment #10) > boost 1.53.0-r1 > > USE flags: icu nls threads -debug -doc -mpi -python -static-libs -tools Going by headers, while start_thread() is private, join() isn't, so at least the later should be exposed... Attach build log of boost and paste ldd output on libbost_thread.
ldd /usr/lib64/libboost_thread.so.1.53.0 linux-vdso.so.1 (0x00007fff64788000) libboost_system.so.1.53.0 => /usr/lib64/libboost_system.so.1.53.0 (0x00007f7b8f48a000) librt.so.1 => /lib64/librt.so.1 (0x00007f7b8f282000) libstdc++.so.6 => /usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/libstdc++.so.6 (0x00007f7b8ef74000) libgcc_s.so.1 => /usr/lib/gcc/x86_64-pc-linux-gnu/4.8.2/libgcc_s.so.1 (0x00007f7b8ed5d000) libpthread.so.0 => /lib64/libpthread.so.0 (0x00007f7b8eb40000) libc.so.6 => /lib64/libc.so.6 (0x00007f7b8e78f000) libm.so.6 => /lib64/libm.so.6 (0x00007f7b8e48f000) /lib64/ld-linux-x86-64.so.2 (0x00007f7b8f8eb000)
Created attachment 367692 [details] Complete build log of boost
I have now masked boost-1.53 and gone back to 1.52. Rebuilt system, everything works including openimageio. In bug 454100 mention was made of openimageio, actually. I don't know if this is the same problem.
...OK (as in "this sucks")... There doesn't seem to be anything *obviously* wrong in the log. Time to test the really bad options. First, downgrade boost to 1.52.0 and retry. It may or may not work. Regardless of above, install something from gcc:4.7 slot, temporarily switch to it (chances are a better part of the system was already linked against libstdc++ from 4.8, so full permanent downgrade would be tedious at best), (you might need to rebuild cmake at this point), build boost 1.53.0 and retry again. The other bad option would be binutils 2.22 vs 2.23, but the first is more likely. Post the results.
Downgrading boost to 1.52 works fine.
(In reply to Michele Alzetta from comment #16) > Downgrading boost to 1.52 works fine. ...but that doesn't really tell what went wrong, as there was no real change in API wrt. these functions and other than them being marked as inline, there doesn't seem to be anything that should have made them inaccessible.
OK. Switched gcc to 4.7.3 Rebuilt boost 1.53.0-r1 and boost-build 1.53.0, rebuitl cmake with gcc-4.73 Rebuilding openimageio fails: Linking CXX executable iinfo cd /var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/iinfo && /usr/bin/cmake -E cmake_link_script CMakeFiles/iinfo.dir/link.txt --verbose=1 /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-g++ -march=native -mmmx -msse -msse2 -msse4a -m3dnow -O2 -pipe -Wl,-O1 -Wl,--as-needed CMakeFiles/iinfo.dir/iinfo.cpp.o -o iinfo -rdynamic -lHalf -lIex -lImath -lIlmThread -lpthread ../libOpenImageIO/libOpenImageIO.so.1.3.5 -lboost_filesystem-mt -lboost_regex-mt -lboost_system-mt -lboost_thread-mt -ldl -lssl -lcrypto -lfreetype -lHalf -lIex -lImath -lIlmThread -lpthread -lpng -lz -ltiff -ljpeg -lz -ltiff -ljpeg -lwebp -lIlmImf -lgif -lpugixml -Wl,-rpath,/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/libOpenImageIO: ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::start_thread()' ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::join()' collect2: error: ld returned 1 exit status So, it seems that it doesn't matter which gcc is used. Openimageio does not build with boost-1.53.0 on my system.
Created attachment 368110 [details] Complete build log of openimageio built with boost 1.53.0 built with gcc-4.7.3
Downgraded binutils to sys-devel/binutils-2.23.2 - build still fails. Linking CXX executable iinfo cd /var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/iinfo && /usr/bin/cmake -E cmake_link_script CMakeFiles/iinfo.dir/link.txt --verbose=1 /usr/lib64/ccache/bin/x86_64-pc-linux-gnu-g++ -march=native -mmmx -msse -msse2 -msse4a -m3dnow -O2 -pipe -Wl,-O1 -Wl,--as-needed CMakeFiles/iinfo.dir/iinfo.cpp.o -o iinfo -rdynamic -lHalf -lIex -lImath -lIlmThread -lpthread ../libOpenImageIO/libOpenImageIO.so.1.3.5 -lboost_filesystem-mt -lboost_regex-mt -lboost_system-mt -lboost_thread-mt -ldl -lssl -lcrypto -lfreetype -lHalf -lIex -lImath -lIlmThread -lpthread -lpng -lz -ltiff -ljpeg -lz -ltiff -ljpeg -lwebp -lIlmImf -lgif -lpugixml -Wl,-rpath,/var/tmp/portage/media-libs/openimageio-1.3.5/work/openimageio-1.3.5_build/libOpenImageIO: ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::start_thread()' ../libOpenImageIO/libOpenImageIO.so.1.3.5: undefined reference to `boost::thread::join()' collect2: error: ld returned 1 exit status So, I'll just mask boost-1.53 again.
Just wished to add, upgraded my system to glibc 2.18-r1. Emerge -e system followed by emerge -e world, with boost 1.53.0-r1 and gcc 4.8.2 Everything has built fine, except for openimageio (which is now asking to be rebuilt with emerge @preserved-rebuild ) So, it seems openimageio will not build with boost-1.53 - at least, not on this system, and using two different glibc and two different gcc, with a clean build chain each time. It would be interesting if someone could tell me they have a system on which they can, we could try to compare systems.
rm -rf /usr/include/boost-1_51 enjoy
rm -rf /usr/include/boost-1_51 fixed it. So was that a bug in the boost-1.51 ebuild?
may be i don't know why /usr/include/boost-1_51 is still exists
(In reply to megabaks from comment #24) > may be > i don't know why /usr/include/boost-1_51 is still exists likely old cruft from times when boost was still eselectable.
