Hi, I've never met this issue before on portage-2.1.x so I'm addressing it as a portage-2.2.x only. I happened to encounter the following issue a couple of times in the past days, with different packages (chromium, libreoffice, wine, etc...): >>> Source unpacked in /var/tmp/portage/app-emulation/wine-1.7.4/work (null)*(null) --------------------------- ACCESS VIOLATION SUMMARY --------------------------- (null)*(null) LOG FILE: "/var/log/sandbox/sandbox-28073.log" (null)*(null) VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //obm_checkboxes.bmp A: /obm_checkboxes.bmp R: /obm_checkboxes.bmp C: chmod -fR a+rX,u+w,g-w,o-w ./winepulse-patches-1.7.4 ./wine-1.7.4 F: fchmodat S: deny P: //misc.c A: /misc.c R: /misc.c C: chmod -fR a+rX,u+w,g-w,o-w ./wine-gentoo-2013.06.24 ./winepulse-patches-1.7.4 ./wine-1.7.4 (null)*(null) -------------------------------------------------------------------------------- The log is exactly the same for each package that it randomly fails with. Here's another example with chromium: >>> Source unpacked in /var/tmp/portage/www-client/chromium-31.0.1650.12-r1/work (null)*(null) --------------------------- ACCESS VIOLATION SUMMARY --------------------------- (null)*(null) LOG FILE: "/var/log/sandbox/sandbox-1472.log" (null)*(null) VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //include A: /include R: /include C: chmod -fR a+rX,u+w,g-w,o-w ./chromium-31.0.1650.12 F: fchmodat S: deny P: //unpack.cc A: /unpack.cc R: /unpack.cc C: chmod -fR a+rX,u+w,g-w,o-w ./chromium-31.0.1650.12 F: fchmodat S: deny P: //android_content_strings_pl.xtb A: /android_content_strings_pl.xtb R: /android_content_strings_pl.xtb C: chmod -fR a+rX,u+w,g-w,o-w ./chromium-31.0.1650.12 (null)*(null) -------------------------------------------------------------------------------- It seems I'm not the only one experiencing this: <Hello71> I am encountering the same issue. <Hello71> it only happens like 10% of the time <Hello71> when system is under load <Hello71> which means probably race condition Portage 2.2.7 (default/linux/amd64/13.0/desktop/kde, gcc-4.8.1, glibc-2.17, 3.12.0-rc5 x86_64) ================================================================= System uname: Linux-3.12.0-rc5-x86_64-Intel-R-_Core-TM-_i7-2600K_CPU_@_3.40GHz-with-gentoo-Gentoo-Powered KiB Mem: 24658384 total, 12073060 free KiB Swap: 2000088 total, 2000088 free Timestamp of tree: Fri, 18 Oct 2013 14:45:01 +0000 ld GNU ld (GNU Binutils) 2.23.2 app-shells/bash: 4.2_p45 dev-java/java-config: 2.2.0 dev-lang/python: 2.7.5-r3, 3.2.5-r3, 3.3.2-r2 dev-util/cmake: 2.8.11.2 dev-util/pkgconfig: 0.28 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.12.2 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.11.6, 1.12.6, 1.13.4, 1.14 sys-devel/binutils: 2.23.2 sys-devel/gcc: 4.7.3-r1, 4.8.1-r1 sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.2 sys-devel/make: 3.82-r4 sys-kernel/linux-headers: 3.11 (virtual/os-headers) sys-libs/glibc: 2.17 Repositories: gentoo x-portage ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0 /var/bind /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-march=native -O2 -pipe" DISTDIR="/media/STORAGE/Software/---OS---/gentoo/distfiles" EMERGE_DEFAULT_OPTS="" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs clean-logs config-protect-if-modified distlocks fail-clean fixlafiles merge-sync news nodoc noinfo parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userpriv usersandbox usersync" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://ftp.snt.utwente.nl/pub/os/linux/gentoo http://mirror.netcologne.de/gentoo/ http://mirror.bytemark.co.uk/gentoo/ http://de-mirror.org/gentoo/" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j9" PKGDIR="/media/STORAGE/Software/---OS---/gentoo/packages" PORTAGE_COMPRESS="xz" PORTAGE_COMPRESS_FLAGS="-9" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_EXTRA_OPTS="-4" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://81.91.242.10/gentoo-portage" USE="X a52 aac acl acpi alsa amd64 apng ares avx bash-completion berkdb bluetooth bluray branding bzip2 c++0x cairo cli consolekit cracklib crypt cxx dbus declarative dri dts dvdr emboss encode exif fam firefox flac fortran gdbm gif gpm gstreamer gtk iconv icu jpeg kde kdm kipi lcms ldap libnotify lm_sensors lzma mad matroska mmx mng modules mp3 mp4 mpeg mudflap multilib ncurses nls nptl nsplugin ogg opencl opengl openmp pam pango pcre pdf perl phonon plasma png policykit ppds pulseaudio python qt3support qt4 readline sdl semantic-desktop session sse sse2 sse3 sse4 sse4_1 ssl ssse3 startup-notification svg tcpd tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 xcb xcomposite xinerama xml xscreensaver xv xvid zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_US" NETBEANS_MODULES="apisupport cnd java javafx php profiler websvccommon mobility webcommon" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" VIDEO_CARDS="fglrx" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, USE_PYTHON
Hello, I'm seeing a similar issue on several packages as well. Most recently on git-sources-3.12_rc7, but also earlier on gcc-4.8.1 and git-sources-3.12_rc5. Sandbox violations are not always repeatable, after several attempts these packages installed without error. My sandbox logs for the above mentioned packages are included as well as the latest build error and emerge --info -------------------------------------------- Nov 1 13:59 sandbox-18682.log -------------------------------------------- VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //qib_7322_regs.h A: /qib_7322_regs.h R: /qib_7322_regs.h C: chmod -fR a+rX,u+w,g-w,o-w ./linux-3.11 F: fchmodat S: deny P: //sysfs-class-power A: /sysfs-class-power R: /sysfs-class-power C: chmod -fR a+rX,u+w,g-w,o-w ./linux-3.11 -------------------------------------------- Nov 1 13:52 sandbox-17341.log -------------------------------------------- VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //st_sensors_buffer.c A: /st_sensors_buffer.c R: /st_sensors_buffer.c C: chmod -fR a+rX,u+w,g-w,o-w ./linux-3.11 --------------------------------------------- Nov 1 12:47 sandbox-13795.log --------------------------------------------- VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //scan.h A: /scan.h R: /scan.h C: chmod -fR a+rX,u+w,g-w,o-w ./linux-3.11 -------------------------------------------- Oct 31 11:49 sandbox-16295.log -------------------------------------------- VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //tps65217.txt A: /tps65217.txt R: /tps65217.txt C: chmod -R a+r-w+X,u+w linux-3.12-rc7 -------------------------------------------- Oct 31 11:38 sandbox-14311.log -------------------------------------------- VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //u_gether.h A: /u_gether.h R: /u_gether.h C: chmod -fR a+rX,u+w,g-w,o-w ./linux-3.11 F: fchmodat S: deny P: //maxinefb.c A: /maxinefb.c R: /maxinefb.c C: chmod -fR a+rX,u+w,g-w,o-w ./linux-3.11 --------------------------------------------- Oct 15 17:32 sandbox-31453.log --------------------------------------------- VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //xfs_inode_fork.h A: /xfs_inode_fork.h R: /xfs_inode_fork.h C: chmod -R a+r-w+X,u+w linux-3.12-rc5 --------------------------------------------- Oct 15 08:43 sandbox-14101.log --------------------------------------------- VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //waitq.c A: /waitq.c R: /waitq.c C: chmod -R a+r-w+X,u+w linux-3.12-rc5 -------------------------------------------- Oct 7 10:38 sandbox-20523.log -------------------------------------------- VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //c87b04c.ada A: /c87b04c.ada R: /c87b04c.ada C: chmod -fR a+rX,u+w,g-w,o-w ./patch ./piepatch ./uclibc ./gcc-4.8.1 F: fchmodat S: deny P: //default_format_1.f90 A: /default_format_1.f90 R: /default_format_1.f90 C: chmod -fR a+rX,u+w,g-w,o-w ./patch ./piepatch ./uclibc ./gcc-4.8.1 F: fchmodat S: deny P: //ServerRequestInterceptors.class A: /ServerRequestInterceptors.class R: /ServerRequestInterceptors.class C: chmod -fR a+rX,u+w,g-w,o-w ./patch ./piepatch ./uclibc ./gcc-4.8.1 F: fchmodat S: deny P: //defarg7.C A: /defarg7.C R: /defarg7.C C: chmod -fR a+rX,u+w,g-w,o-w ./patch ./specs ./piepatch ./uclibc ./gcc-4.8.1 -------------------------------------------- Oct 7 09:54 sandbox-16867.log -------------------------------------------- VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //loop-11.c A: /loop-11.c R: /loop-11.c C: chmod -fR a+rX,u+w,g-w,o-w ./patch ./piepatch ./uclibc ./gcc-4.8.1 F: fchmodat S: deny P: //using10.C A: /using10.C R: /using10.C C: chmod -fR a+rX,u+w,g-w,o-w ./patch ./piepatch ./uclibc ./gcc-4.8.1 F: fchmodat S: deny P: //Cp852.class A: /Cp852.class R: /Cp852.class C: chmod -fR a+rX,u+w,g-w,o-w ./patch ./piepatch ./uclibc ./gcc-4.8.1 emerge -av git-sources These are the packages that would be merged, in order: Calculating dependencies... done! [ebuild R ] sys-kernel/git-sources-3.12_rc7:3.12_rc7 USE="-build -symlink" 0 kB Total: 1 package (1 reinstall), Size of downloads: 0 kB Would you like to merge these packages? [Yes/No] y >>> Verifying ebuild manifests >>> Emerging (1 of 1) sys-kernel/git-sources-3.12_rc7 * patch-3.12-rc7.xz SHA256 SHA512 WHIRLPOOL size ;-) ... [ ok ] * linux-3.11.tar.xz SHA256 SHA512 WHIRLPOOL size ;-) ... [ ok ] >>> Preparing to unpack ... >>> Unpacking source... >>> Unpacking linux-3.11.tar.xz to /var/tmp/portage/sys-kernel/git-sources-3.12_rc7/work * ACCESS DENIED: fchmodat: /qib_7322_regs.h * ACCESS DENIED: fchmodat: /sysfs-class-powergit-sources-3.12_rc7 * Applying patch-3.12-rc7.patch (-p1) ... [ ok ] >>> Source unpacked in /var/tmp/portage/sys-kernel/git-sources-3.12_rc7/work * --------------------------- ACCESS VIOLATION SUMMARY --------------------------- * LOG FILE: "/var/log/sandbox/sandbox-18682.log" * VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //qib_7322_regs.h A: /qib_7322_regs.h R: /qib_7322_regs.h C: chmod -fR a+rX,u+w,g-w,o-w ./linux-3.11 F: fchmodat S: deny P: //sysfs-class-power A: /sysfs-class-power R: /sysfs-class-power C: chmod -fR a+rX,u+w,g-w,o-w ./linux-3.11 * -------------------------------------------------------------------------------- >>> Failed to emerge sys-kernel/git-sources-3.12_rc7, Log file: >>> '/var/tmp/portage/sys-kernel/git-sources-3.12_rc7/temp/build.log emerge --info Portage 2.2.7 (default/linux/amd64/13.0/no-multilib, gcc-4.8.1, glibc-2.17, 3.12.0-rc6 x86_64) ================================================================= System uname: Linux-3.12.0-rc6-x86_64-AMD_Phenom-tm-_II_X4_955_Processor-with-gentoo-2.2 KiB Mem: 8180504 total, 188232 free KiB Swap: 514044 total, 380152 free Timestamp of tree: Fri, 01 Nov 2013 16:15:01 +0000 ld GNU ld (GNU Binutils) 2.23.2 app-shells/bash: 4.2_p45 dev-java/java-config: 2.2.0 dev-lang/python: 2.7.5-r4, 3.3.2-r2 dev-util/cmake: 2.8.12 dev-util/pkgconfig: 0.28 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.12.4 sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.11.6, 1.13.4, 1.14 sys-devel/binutils: 2.23.2 sys-devel/gcc: 4.8.1-r1 sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.2 sys-devel/make: 3.82-r4 sys-kernel/linux-headers: 3.11 (virtual/os-headers) sys-libs/glibc: 2.17 Repositories: gentoo xhub x11 multimedia zugaina lorelei-overlay ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA AdobeFlash-10.1" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=amdfam10 -O3 -pipe -fomit-frame-pointer" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-march=amdfam10 -O3 -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="-v" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://gentoo.osuosl.org/ http://distro.ibiblio.org/pub/linux/distributions/gentoo/ http://mirror.iawnet.sandia.gov/gentoo/ ftp://ftp.ussg.iu.edu/pub/linux/gentoo http://ftp.ucsb.edu/pub/mirrors/linux/gentoo/ http://cudlug.cudenver.edu/gentoo/ http://mirror.datapipe.net/gentoo http://mirror.usu.edu/mirrors/gentoo/ http://mirror.mcs.anl.gov/pub/gentoo/ http://mirror.mcs.anl.gov/pub/gentoo/ http://gentoo.mirrors.easynews.com/linux/gentoo/ http://gentoo.cites.uiuc.edu/pub/gentoo/ http://mirror.fslutd.org/linux/distributions/gentoo/ http://lug.mtu.edu/gentoo/ http://www.las.ic.unicamp.br/pub/gentoo/ http://trumpetti.atm.tut.fi/gentoo/ http://mirrors.linuxant.fr/distfiles.gentoo.org/ http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ http://ftp.rhnet.is/pub/gentoo/ http://ftp.iij.ad.jp/pub/linux/gentoo/ http://ftp.jaist.ac.jp/pub/Linux/Gentoo/ http://gentoo.aditsu.net:8000/ http://ftp.daum.net/gentoo/ " LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j5" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/xhub /var/lib/layman/x11 /var/lib/layman/multimedia /var/lib/layman/zugaina /var/lib/layman/lorelei /usr/local/portage" SYNC="rsync://rsync.namerica.gentoo.org/gentoo-portage" USE="3dnow 3dnowext acl acpi alsa amd64 berkdb bzip2 cdr cli cracklib crypt cxx dri dvd dvdr fortran gdbm iconv ipv6 mmx mmxext modules mp3 mudflap ncurses nls nptl ogg opengl openmp pam pcre readline session sse sse2 ssl tcpd threads unicode wayland xinerama zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="evdev joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby18" USERLAND="GNU" VIDEO_CARDS="radeon r600 ati" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7 3.3" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Upgrading KDE to 4.11.3 today failed 5 packages with these sandbox issues, for example: * Package: kde-base/marble-4.11.3 * Repository: gentoo * Maintainer: kde@gentoo.org * USE: amd64 elibc_glibc handbook kde kernel_linux plasma python userland_GNU * FEATURES: preserve-libs sandbox userpriv usersandbox >>> Unpacking source... >>> Unpacking marble-4.11.3.tar.xz to /var/tmp/portage/kde-base/marble-4.11.3/work >>> Source unpacked in /var/tmp/portage/kde-base/marble-4.11.3/work (null)*(null) --------------------------- ACCESS VIOLATION SUMMARY --------------------------- (null)*(null) LOG FILE: "/var/log/sandbox/sandbox-32648.log" (null)*(null) VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: fchmodat S: deny P: //Marble.GeoDataOuterBoundary.html A: /Marble.GeoDataOuterBoundary.html R: /Marble.GeoDataOuterBoundary.html C: chmod -fR a+rX,u+w,g-w,o-w ./marble-4.11.3 (null)*(null) --------------------------------------------------------------------------------
I have been chasing this for days because it cropped up while doing catalyst builds on a new Haswell based machine. Here is a summery of what I know so far: * Most posts here look the same, completely missing all directory info. That is perhaps the most common case I've seen but it does have some other varriants where only the canonical directory path is wrong. For example: F: unlinkat S: deny P: liblzma_la-vli_size.lo A: /var/tmp/portage/app-arch/xz-utils-5.0.5-r1/work/xz-5.0.5-amd64/src/liblzma/liblzma_la-vli_size.lo R: /liblzma_la-vli_size.lo C: rm -f .libs/liblzma_la-vli_size.o liblzma_la-vli_size.lo liblzma_la-vli_size.loT * most posts here report *at syscalls and that is what I've usually seen but they are not the only ones. some others: F: open_wr S: deny P: conftest.err A: /var/tmp/portage/sys-apps/findutils-4.4.2-r1/work/findutils-4.4.2/conftest.err R: /conftest.err C: /bin/sh ./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --enable-nls --libexecdir=/usr/lib64/find F: mkdir S: deny P: confdir3 A: /var/tmp/portage/app-arch/tar-1.26-r1/work/tar-1.26/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3/confdir3 R: /confdir3 C: ./conftest * I've had the most success reproducing this with a stage1 bootstrap emerge, catalyst optional. Running emerge by hand with minimal use flags, a alternate ROOT value and the stage1 bootstrap package list works fine. It often fails within the first 20-30 packages. * Lots of parallelism helps, which I think is also why I've had so much success with the simplified stage1 emerge. More complex dependency trees seem to have more single package bottle necks to slow thigns down so it takes quite a long time for emerge -e world on a existing system to break. For reference: MAKEOPTS="-j8 --load-average=12" EMERGE_DEFAULT_OPTS="$MAKEOPTS" * For a while I was thinking it had something to do with this new machine since I had not seen it on others running the exact same build (identical stage3+binary packages+config) but I see reports here list older CPUs so that is not a factor. * I do see other reports here all using kernel 3.12-rc* which combined with a bit of luck could explain why I've seen the difference between machines, the kernels were the one thing that differed. I will start investigating this possibility next.
Oh, forgot to mention. I've reproduced the failures on: * portage 2.1.12.2 and 2.2.7 * sandbox 2.4 and 2.6-r1 * glibc 2.15-r3 2.16 and 2.17
Created attachment 363178 [details, diff] [PATCH] dcache: Revert pathname locking changes. Found it! It is a kernel bug in 3.12: commit 232d2d60aa5469bb097f55728f65146bd49c1d25 dcache: Translating dentry into pathname without taking rename_lock For reference a patch reverting that and two dependent commits is attached.
(In reply to Michael Marineau from comment #5) > Created attachment 363178 [details, diff] [details, diff] > [PATCH] dcache: Revert pathname locking changes. > > Found it! It is a kernel bug in 3.12: > > commit 232d2d60aa5469bb097f55728f65146bd49c1d25 > dcache: Translating dentry into pathname without taking rename_lock > > For reference a patch reverting that and two dependent commits is attached. And reported to the original author: http://www.spinics.net/lists/kernel/msg1634947.html
*** Bug 491330 has been marked as a duplicate of this bug. ***
*** Bug 491616 has been marked as a duplicate of this bug. ***
Patch in comment #5 worked for me. Thanks Mike.
Instead of reverting there seems to be a proper fix at http://www.spinics.net/lists/kernel/msg1634975.html though I'm not able to test it at the moment.
This fix: http://git.kernel.org/cgit/linux/kernel/git/torvalds/linux.git/commit/fs/dcache.c?id=ede4cebce16f5643c61aedd6d88d9070a1d23a68 has been queued up for the 3.12.2 release but can be applied as a patch to 3.12 and 3.12.1.
Patch in comment 9 and 10 works on 3.12.1 here.
seems to be also culprit for this bug: # grub2-mkconfig -o /boot/grub/grub.cfg Generating grub.cfg ... Found linux image: /boot/kernel-genkernel-x86_64-3.12.1-gentoo Found initrd image: /boot/initramfs-genkernel-x86_64-3.12.1-gentoo No volume groups found [ 1095.768142] REISERFS warning (device sdb2): sh-2006 read_super_block: bread failed (dev sdb2, block 8, size 1024) [ 1095.768147] REISERFS warning (device sdb2): sh-2006 read_super_block: bread failed (dev sdb2, block 64, size 1024) [ 1095.768148] REISERFS warning (device sdb2): sh-2021 reiserfs_fill_super: can not find reiserfs on sdb2 [ 1095.768976] EXT4-fs (sdb2): unable to read superblock [ 1095.769823] EXT4-fs (sdb2): unable to read superblock [ 1095.770607] EXT4-fs (sdb2): unable to read superblock [ 1095.771486] SQUASHFS error: Can't find a SQUASHFS superblock on sdb2 [ 1095.772408] FAT-fs (sdb2): bogus number of reserved sectors [ 1095.772412] FAT-fs (sdb2): Can't find a valid FAT filesystem [ 1095.773310] FAT-fs (sdb2): bogus number of reserved sectors [ 1095.773311] FAT-fs (sdb2): Can't find a valid FAT filesystem [ 1095.774114] isofs_fill_super: bread failed, dev=sdb2, iso_blknum=16, block=32 [ 1095.776822] UDF-fs: error (device sdb2): udf_read_tagged: read failed, block=256, location=256 [ 1095.776958] UDF-fs: error (device sdb2): udf_read_tagged: tag version 0x0000 != 0x0002 || 0x0003, block 0 [ 1095.776963] UDF-fs: error (device sdb2): udf_read_tagged: read failed, block=512, location=512 [ 1095.776964] UDF-fs: error (device sdb2): udf_read_tagged: tag version 0x0000 != 0x0002 || 0x0003, block 0 [ 1095.776965] UDF-fs: error (device sdb2): udf_read_tagged: tag version 0x0000 != 0x0002 || 0x0003, block 0 [ 1095.776966] UDF-fs: warning (device sdb2): udf_load_vrs: No anchor found [ 1095.776967] UDF-fs: Rescanning with blocksize 2048 [ 1095.776978] UDF-fs: error (device sdb2): udf_read_tagged: read failed, block=256, location=256 [ 1095.776979] UDF-fs: error (device sdb2): udf_read_tagged: read failed, block=512, location=512 [ 1095.776980] UDF-fs: warning (device sdb2): udf_load_vrs: No anchor found [ 1095.776981] UDF-fs: warning (device sdb2): udf_fill_super: No partition found (1) [ 1095.778095] XFS (sdb2): bad magic number [ 1095.778103] ffff8805ab806000: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ................ [ 1095.778106] ffff8805ab806010: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ................ [ 1095.778108] ffff8805ab806020: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ................ [ 1095.778111] ffff8805ab806030: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ................ [ 1095.778116] XFS (sdb2): Internal error xfs_sb_read_verify at line 628 of file fs/xfs/xfs_sb.c. Caller 0xffffffff811f2d38 [ 1095.778131] CPU: 0 PID: 103 Comm: kworker/0:1H Tainted: P O 3.12.1-gentoo #3 [ 1095.778132] Hardware name: CLEVO CO. W35_37ET/W35_37ET, BIOS 4.6.5 03/25/2013 [ 1095.778136] Workqueue: xfslogd xfs_buf_iodone_work [ 1095.778138] 00000000000040d4 ffff880611f79d70 ffffffff8179efd9 ffff8805d9b8f800 [ 1095.778139] ffff880611f79d88 ffffffff811f4da5 ffffffff811f2d38 ffff880611f79dc0 [ 1095.778141] ffffffff811f4df5 0000027400003dc8 0000000000000016 ffff8805f5176e00 [ 1095.778143] Call Trace: [ 1095.778147] [<ffffffff8179efd9>] dump_stack+0x4e/0x82 [ 1095.778149] [<ffffffff811f4da5>] xfs_error_report+0x35/0x37 [ 1095.778151] [<ffffffff811f2d38>] ? xfs_buf_iodone_work+0x3f/0x77 [ 1095.778153] [<ffffffff811f4df5>] xfs_corruption_error+0x4e/0x69 [ 1095.778156] [<ffffffff8123510d>] xfs_sb_read_verify+0xeb/0x100 [ 1095.778158] [<ffffffff811f2d38>] ? xfs_buf_iodone_work+0x3f/0x77 [ 1095.778159] [<ffffffff811f2d38>] xfs_buf_iodone_work+0x3f/0x77 [ 1095.778162] [<ffffffff81047f4f>] process_one_work+0x1cc/0x2dc [ 1095.778163] [<ffffffff810484c3>] worker_thread+0x1d3/0x2bd [ 1095.778165] [<ffffffff810482f0>] ? rescuer_thread+0x267/0x267 [ 1095.778167] [<ffffffff8104d04f>] kthread+0xb5/0xbd [ 1095.778168] [<ffffffff8104cf9a>] ? kthread_create_on_node+0x113/0x113 [ 1095.778170] [<ffffffff817a6cfc>] ret_from_fork+0x7c/0xb0 [ 1095.778172] [<ffffffff8104cf9a>] ? kthread_create_on_node+0x113/0x113 [ 1095.778173] XFS (sdb2): Corruption detected. Unmount and run xfs_repair [ 1095.778177] XFS (sdb2): SB validate failed with error 22. [ 1095.798124] NILFS: unable to read superblock [ 1095.799048] (mount,3314,5):ocfs2_get_sector:1851 ERROR: status = -5 [ 1095.799064] (mount,3314,5):ocfs2_sb_probe:807 ERROR: status = -5 [ 1095.799065] (mount,3314,5):ocfs2_fill_super:1038 ERROR: superblock probe failed! [ 1095.799066] (mount,3314,5):ocfs2_fill_super:1229 ERROR: status = -5 [ 1095.800628] attempt to access beyond end of device [ 1095.800630] sdb2: rw=48, want=136, limit=2 [ 1095.800631] gfs2: error -5 reading superblock [ 1095.801336] GFS2: gfs2 mount does not exist [ 1096.146390] REISERFS warning (device sdc2): sh-2006 read_super_block: bread failed (dev sdc2, block 8, size 1024) [ 1096.146394] REISERFS warning (device sdc2): sh-2006 read_super_block: bread failed (dev sdc2, block 64, size 1024) [ 1096.146395] REISERFS warning (device sdc2): sh-2021 reiserfs_fill_super: can not find reiserfs on sdc2 [ 1096.147155] EXT4-fs (sdc2): unable to read superblock [ 1096.147891] EXT4-fs (sdc2): unable to read superblock [ 1096.148712] EXT4-fs (sdc2): unable to read superblock [ 1096.150061] SQUASHFS error: Can't find a SQUASHFS superblock on sdc2 [ 1096.151355] FAT-fs (sdc2): bogus number of reserved sectors [ 1096.151360] FAT-fs (sdc2): Can't find a valid FAT filesystem [ 1096.152808] FAT-fs (sdc2): bogus number of reserved sectors [ 1096.152810] FAT-fs (sdc2): Can't find a valid FAT filesystem [ 1096.153561] isofs_fill_super: bread failed, dev=sdc2, iso_blknum=16, block=32 [ 1096.157960] UDF-fs: error (device sdc2): udf_read_tagged: read failed, block=256, location=256 [ 1096.159102] UDF-fs: error (device sdc2): udf_read_tagged: tag version 0x0000 != 0x0002 || 0x0003, block 0 [ 1096.159109] UDF-fs: error (device sdc2): udf_read_tagged: read failed, block=512, location=512 [ 1096.159111] UDF-fs: error (device sdc2): udf_read_tagged: tag version 0x0000 != 0x0002 || 0x0003, block 0 [ 1096.159112] UDF-fs: error (device sdc2): udf_read_tagged: tag version 0x0000 != 0x0002 || 0x0003, block 0 [ 1096.159113] UDF-fs: warning (device sdc2): udf_load_vrs: No anchor found [ 1096.159114] UDF-fs: Rescanning with blocksize 2048 [ 1096.159152] UDF-fs: error (device sdc2): udf_read_tagged: read failed, block=256, location=256 [ 1096.159154] UDF-fs: error (device sdc2): udf_read_tagged: read failed, block=512, location=512 [ 1096.159155] UDF-fs: warning (device sdc2): udf_load_vrs: No anchor found [ 1096.159155] UDF-fs: warning (device sdc2): udf_fill_super: No partition found (1) [ 1096.160722] XFS (sdc2): bad magic number [ 1096.160729] ffff8805abaac000: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ................ [ 1096.160732] ffff8805abaac010: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ................ [ 1096.160734] ffff8805abaac020: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ................ [ 1096.160737] ffff8805abaac030: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ................ [ 1096.160742] XFS (sdc2): Internal error xfs_sb_read_verify at line 628 of file fs/xfs/xfs_sb.c. Caller 0xffffffff811f2d38 [ 1096.160747] CPU: 1 PID: 1066 Comm: kworker/1:1H Tainted: P O 3.12.1-gentoo #3 [ 1096.160749] Hardware name: CLEVO CO. W35_37ET/W35_37ET, BIOS 4.6.5 03/25/2013 [ 1096.160758] Workqueue: xfslogd xfs_buf_iodone_work [ 1096.160762] 0000000000005338 ffff880612681d70 ffffffff8179efd9 ffff880610ef2800 [ 1096.160767] ffff880612681d88 ffffffff811f4da5 ffffffff811f2d38 ffff880612681dc0 [ 1096.160771] ffffffff811f4df5 000002740000502c 0000000000000016 ffff8805f5236e40 [ 1096.160776] Call Trace: [ 1096.160799] [<ffffffff8179efd9>] dump_stack+0x4e/0x82 [ 1096.160801] [<ffffffff811f4da5>] xfs_error_report+0x35/0x37 [ 1096.160803] [<ffffffff811f2d38>] ? xfs_buf_iodone_work+0x3f/0x77 [ 1096.160804] [<ffffffff811f4df5>] xfs_corruption_error+0x4e/0x69 [ 1096.160807] [<ffffffff8123510d>] xfs_sb_read_verify+0xeb/0x100 [ 1096.160809] [<ffffffff811f2d38>] ? xfs_buf_iodone_work+0x3f/0x77 [ 1096.160811] [<ffffffff811f2d38>] xfs_buf_iodone_work+0x3f/0x77 [ 1096.160813] [<ffffffff81047f4f>] process_one_work+0x1cc/0x2dc [ 1096.160814] [<ffffffff810484c3>] worker_thread+0x1d3/0x2bd [ 1096.160816] [<ffffffff810482f0>] ? rescuer_thread+0x267/0x267 [ 1096.160818] [<ffffffff8104d04f>] kthread+0xb5/0xbd [ 1096.160820] [<ffffffff8104cf9a>] ? kthread_create_on_node+0x113/0x113 [ 1096.160822] [<ffffffff817a6cfc>] ret_from_fork+0x7c/0xb0 [ 1096.160824] [<ffffffff8104cf9a>] ? kthread_create_on_node+0x113/0x113 [ 1096.160825] XFS (sdc2): Corruption detected. Unmount and run xfs_repair [ 1096.160853] XFS (sdc2): SB validate failed with error 22. [ 1096.161724] NILFS: unable to read superblock [ 1096.163149] (mount,3542,1):ocfs2_get_sector:1851 ERROR: status = -5 [ 1096.163151] (mount,3542,1):ocfs2_sb_probe:807 ERROR: status = -5 [ 1096.163152] (mount,3542,1):ocfs2_fill_super:1038 ERROR: superblock probe failed! [ 1096.163153] (mount,3542,1):ocfs2_fill_super:1229 ERROR: status = -5 [ 1096.164727] attempt to access beyond end of device [ 1096.164729] sdc2: rw=48, want=136, limit=2 [ 1096.164730] gfs2: error -5 reading superblock [ 1096.165528] GFS2: gfs2 mount does not exist Found Windows 7 (loader) on /dev/sda1 done
*** Bug 492398 has been marked as a duplicate of this bug. ***
*** Bug 492232 has been marked as a duplicate of this bug. ***
*** Bug 491014 has been marked as a duplicate of this bug. ***
*** Bug 491504 has been marked as a duplicate of this bug. ***
FWIW, I was encountering this regularly. It seems to have stopped recently after some updates (including kernel), so the patch appears to WFM.
*** Bug 492840 has been marked as a duplicate of this bug. ***
*** Bug 492822 has been marked as a duplicate of this bug. ***
Upstream commit is indeed in 3.12.2, which I have bumped a moment ago: + 30 Nov 2013; Tom Wijsman <TomWij@gentoo.org> +gentoo-sources-3.10.21.ebuild, + +gentoo-sources-3.11.10.ebuild, +gentoo-sources-3.12.2.ebuild, + +gentoo-sources-3.2.52.ebuild, +gentoo-sources-3.4.71.ebuild: + Linux patches 3.2.53, 3.4.71, 3.10.21, 3.11.10 and 3.12.2. + 30 Nov 2013; Tom Wijsman <TomWij@gentoo.org> package.mask: + Mask gentoo-sources-3.12.1 as it causes sandbox violations, 3.12.2 is out + now. Thank you very much for reporting!
*** Bug 493576 has been marked as a duplicate of this bug. ***
*** Bug 493518 has been marked as a duplicate of this bug. ***
*** Bug 494192 has been marked as a duplicate of this bug. ***
*** Bug 490946 has been marked as a duplicate of this bug. ***
