472786 – sci-visualization/itksnap - a tool for medical image segmentation

Bug 472786 - sci-visualization/itksnap - a tool for medical image segmentation

Summary: sci-visualization/itksnap - a tool for medical image segmentation

Status:	UNCONFIRMED

Alias:	None

Product:	Gentoo Linux
Classification:	Unclassified
Component:	New packages (show other bugs)
Hardware:	All Linux

Importance:	Normal enhancement (vote)
Assignee:	Default Assignee for New Packages

URL:	http://www.itksnap.org
Whiteboard:
Keywords:	EBUILD, PATCH

Depends on:	124241
Blocks:
	Show dependency tree

Reported:	2013-06-09 20:33 UTC by Gert Wollny
Modified:	2013-10-28 16:21 UTC (History)
CC List:	3 users (show)

See Also:
Package list:
Runtime testing required:	---

Attachments
The ebuild (itksnap-2.4.0.ebuild,679 bytes, text/plain) 2013-06-09 20:35 UTC, Gert Wollny	Details
Patch to find VTK and FLTK (itksnap-2.4.0-find-vtk-and-ftlk.patch,3.73 KB, patch) 2013-06-09 20:36 UTC, Gert Wollny	Details \| Diff
View All Add an attachment (proposed patch, testcase, etc.)

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Description Gert Wollny 2013-06-09 20:33:53 UTC

New ebuild for itk-snap.  

SNAP is a software application used to segment structures in 3D medical images. It provides semi-automatic segmentation using active contour methods, as well as manual delineation and image navigation.

Reproducible: Always

Comment 1 Gert Wollny 2013-06-09 20:35:04 UTC

Created attachment 350568 [details]
The ebuild

Note that the ebuild needs the patch to find VTK and fltk on Gentoo

Comment 2 Gert Wollny 2013-06-09 20:36:07 UTC

Created attachment 350570 [details, diff]
Patch to find VTK and FLTK

Patch to find VTK (i.e. remove the requirement on version 5.6)  and FLTK.

Comment 3 Gert Wollny 2013-06-09 21:15:20 UTC

Note, the patch also adds some includes that were not properly specified when compiling with ITK-4.4.

Comment 4 Hugo Mildenberger 2013-10-28 16:21:53 UTC

(In reply to Gert Wollny from comment #3)

Gert, thank you very much for this ebuild and also for the itk ebuild. At first glance, itksnap installs and runs fine on ~amd64 hardened.