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Bug 436806 - sys-devel/gcc-config-1.7.3 deletes libgcc_s.so.1, causes most everything to stop working
Summary: sys-devel/gcc-config-1.7.3 deletes libgcc_s.so.1, causes most everything to s...
Status: RESOLVED DUPLICATE of bug 433161
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Core system (show other bugs)
Hardware: All Linux
: Normal major (vote)
Assignee: Gentoo Toolchain Maintainers
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2012-10-01 16:16 UTC by Craig Andrews
Modified: 2012-10-03 19:06 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


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Description Craig Andrews gentoo-dev 2012-10-01 16:16:28 UTC
I just upgraded GCC (I'm currently using sys-devel/gcc-4.7.2). After installing the new gcc, I ran:
gcc-config -l
Determined that the new GCC is "1" so I ran:
gcc-config 1

Reproducible: Always

Steps to Reproduce:
1. # gcc-config 1
Actual Results:  
Lots of errors instances of this error:
error while loading shared libraries: libgcc_s.so.1: cannot open shared object file: No such file or directory

This message appears when bash is run... so almost everything is broken (emerge, gcc-config itself, etc).


For GCC:
[ebuild   R   #] sys-devel/gcc-4.7.2  USE="cxx fortran gcj gtk mudflap (multilib) nls nptl openmp (-altivec) -bootstrap -build -doc (-fixed-point) -go -graphite (-hardened) (-libssp) -multislot -nocxx -nopie -nossp -objc -objc++ -objc-gc {-test} -vanilla" 0 kB

For gcc-config:
[ebuild   R    ] sys-devel/gcc-config-1.7.3

# emerge --info
Portage 2.1.11.23 (default/linux/amd64/10.0, gcc-4.7.2, glibc-2.15-r3, 3.5.4-gentoo x86_64)
=================================================================
System uname: Linux-3.5.4-gentoo-x86_64-Intel-R-_Core-TM-2_Quad_CPU_Q9550_@_2.83GHz-with-gentoo-2.2
Timestamp of tree: Mon, 01 Oct 2012 00:15:01 +0000
distcc 3.1 x86_64-pc-linux-gnu [disabled]
ccache version 3.1.8 [enabled]
app-shells/bash:          4.2_p37
dev-java/java-config:     2.1.12
dev-lang/python:          2.7.3-r2, 3.2.3-r1
dev-util/ccache:          3.1.8
dev-util/cmake:           2.8.9
dev-util/pkgconfig:       0.27.1
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.10.5
sys-apps/sandbox:         2.6
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.10.3, 1.11.6, 1.12.4
sys-devel/binutils:       2.22.90
sys-devel/gcc:            4.7.2
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r3
sys-kernel/linux-headers: 3.5 (virtual/os-headers)
sys-libs/glibc:           2.15-r3
Repositories: gentoo openrc webapp-experimental sabayon sunrise x-portage
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA Intel-SDP"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -march=native -pipe -fomit-frame-pointer -flto"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.0/conf"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.4/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=native -pipe -fomit-frame-pointer -flto"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--jobs=4 --load-average=4.5"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs ccache config-protect-if-modified distlocks ebuild-locks fixlafiles news parallel-fetch parallel-install protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch usersandbox webrsync-gpg xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -flto"
LINGUAS="en"
MAKEOPTS="-j5"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/openrc /var/lib/layman/webapps-experimental /var/lib/layman/sabayon /var/lib/layman/sunrise /usr/local/portage"
SYNC="rsync://rsync.namerica.gentoo.org/gentoo-portage"
USE="X a52 aac aacs acl acpi aiglx alsa amd64 amr amrnb amrwb animation apache2 apng artworkextra asf aspnet2 asyncns authdaemond avahi avi bash-completion bcmath berkdb bitmap-fonts bluetooth bluray bmp bonjour bzip2 cairo caps ccache cdda cddb cdparanoia cdr chm cli consolekit cracklib crypt cryptsetup css cups curl cxx daap dbus device-mapper dga dirac divx4linux dlloader dovecot-sasl dpms dri dts dv dvb dvd dvdr dvdread enca encode exif faac fam fame fat fbcondecor fbsplash ffmpeg fftw firefox flac fontconfig foomaticdb fortran freetype ftp gaim gd gdbm geoip gif gimpprint glamor gles glib glibc-omitfp glitz glut gnome gphoto2 gpm gsm gstreamer gstreamer10 gtk gtk2 hardenedphp hbci howl howl-compat https iconv idn imagemagick imap imlib innodb ipv6 java java5 jbig joystick jpeg jpeg2k junit kdehiddenvisibility kvm lapack lcms libfame libkms libnotify libsamplerate libusb lirc live lm_sensors lzma lzo mad maildir mdnsresponder-compat mjpeg mmap mms mmx mmxext mng modules mono motif mozilla mozsvg mp3 mpeg mpeg2 mplayer mudflap multilib musepack mysql mythtv ncurses nemesi network nls nptl nptlonly ntfs offensive ofx ogg oggvorbis openal opencl openexr opengl openmp openvg pam pango pcre pdf pdflib perl phonon pic pie png pnp policykit ppd ppds pppd pulseaudio python qt qt3 qt3support qt4 quicktime rar readline resolvconf rtc rtmp samba schroedinger screensaver sctp sdl session sharedmem shout sna sni snmp sox speex spell sqlite sse sse2 sse3 ssl ssse3 suspend2 svg tcpd theora threads tiff tls transcode truetype truetype-fonts type-fonts udev udisks unicode unzip upnp ups usb uxa v4l2 vaapi vcd vdpau videos vorbis vpx wayland webdav webservices wifi wmf wv x264 xa xanim xattr xcb xcomposite xinerama xml xml2 xpm xprint xrandr xv xvid xvmc zeroconf zip zlib" ALSA_CARDS="hda-intel" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias auth_digest proxy proxy_ajp proxy_connect proxy_http reqtimeout cgi" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CURL_SSL="nss" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev joystick keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en" LIRC_DEVICES="userspace" PHP_TARGETS="php5-4" PYTHON_TARGETS="python3_2 python2_7" RUBY_TARGETS="jruby ruby19" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
USE_PYTHON="2.7 3.2"
Unset:  CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 SpanKY gentoo-dev 2012-10-02 03:34:49 UTC
your system shouldn't be linking everything against libgcc_s.so since you're on x86_64.  i'm guessing it's related to -flto though.
Comment 2 Craig Andrews gentoo-dev 2012-10-02 15:13:34 UTC
(In reply to comment #1)
> your system shouldn't be linking everything against libgcc_s.so since you're
> on x86_64.  i'm guessing it's related to -flto though.

Turns out that app-shells/bash was the only thing linked against libgcc_s.so. So I:
* disabled LTO for app-shells/bash
* emerged app-shells/bash
* deleted /lib64/libgcc_s.so.1
* re-enabled LTO for app-shells/bash
* emerged app-shells/bash
ldd indicates that bash is no longer linked to libgcc_s.so.

So this is probably a problem with LTO. It's relatively easy to reproduce (simply emerge bash with LTO when libgcc_s.so exists). But I'm not sure what to do next - is there somewhere that I should report this issue so it gets addressed?
Comment 3 SpanKY gentoo-dev 2012-10-03 19:06:02 UTC

*** This bug has been marked as a duplicate of bug 433161 ***