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Bug 402849 - sci-biology/GBrowse: add USE="chado" and its dependencies
Summary: sci-biology/GBrowse: add USE="chado" and its dependencies
Status: UNCONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Biology related packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2012-02-09 11:03 UTC by Martin Mokrejš
Modified: 2014-12-19 19:22 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


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Description Martin Mokrejš 2012-02-09 11:03:31 UTC
In the sci-biology/gbrowse I had a lot more required packages. The official sci-biology/GBrowse ebuild requires much less. Lets come with USE flags to give people a more complete installation. As a startup for the Chado database schema, there is a listing of requirements at:

http://gmod.org/wiki/Installing_Chado_on_Ubuntu_HOWTO

In sci overlay are for this ready:
dev-perl/Bio-BigFile
dev-perl/Bio-DB-Das-Chado
dev-perl/DBIx-DBStag


A good overview of other candidates for USE flag could me made from: http://gmod.org/wiki/GBrowse