'emerge world' fails with: root@impala:/usr/local/portage/sci-biology(366)# emerge -uvND world These are the packages that would be merged, in order: Calculating dependencies... done! [ebuild U ] sci-biology/embassy-signature-0.1.0-r5 [0.1.0-r4] USE="X mysql%* pdf%* png postgres%* -static-libs%" 0 kB [0=>1] ... >>> Starting parallel fetch >>> Emerging (1 of 9) sci-biology/embassy-signature-0.1.0-r5 from science * Fetching files in the background. To view fetch progress, run * `tail -f /var/log/emerge-fetch.log` in another terminal. !!! Fetched file: embassy-signature-0.1.0-r5.tar.gz VERIFY FAILED! !!! Reason: Insufficient data for checksum verification !!! Got: !!! Expected: MD5 RMD160 SHA1 SHA256 SHA512 WHIRLPOOL * Fetch failed for 'sci-biology/embassy-signature-0.1.0-r5', Log file:
Created attachment 296863 [details] An embassy-signature ebuild which solved the issue. SRC_URI added and patch removed.
# Justin Lecher <jlec@gentoo.org> (20 Feb 2012) # They are broken in one or the other way # Need to be bumped to emboss-6.4.0 sci-biology/emboss::science sci-biology/embassy::science sci-biology/embassy-cbstools::science sci-biology/embassy-domainatrix::science sci-biology/embassy-domalign::science sci-biology/embassy-domsearch::science sci-biology/embassy-emnu::science sci-biology/embassy-esim4::science sci-biology/embassy-hmmer::science sci-biology/embassy-iprscan::science sci-biology/embassy-mse::science sci-biology/embassy-phylipnew::science sci-biology/embassy-signature::science sci-biology/embassy-structure::science sci-biology/embassy-topo::science sci-biology/embassy-vienna::science