I get the following: root@lynx:/root(2)# emerge -pv1 octave-forge-gsl These are the packages that would be merged, in order: Calculating dependencies... done! !!! All ebuilds that could satisfy "octave-forge-gsl" have been masked. !!! One of the following masked packages is required to complete your request: - sci-mathematics/octave-forge-gsl-1.0.8 (masked by: invalid: DEPEND: USE flag 'bindist' referenced in conditional '!bindist?' is not in IUSE, invalid: RDEPEND: USE flag 'bindist' referenced in conditional '!bindist?' is not in IUSE) - sci-mathematics/octave-forge-gsl-1.0.7 (masked by: invalid: DEPEND: USE flag 'bindist' referenced in conditional '!bindist?' is not in IUSE, invalid: RDEPEND: USE flag 'bindist' referenced in conditional '!bindist?' is not in IUSE) For more information, see the MASKED PACKAGES section in the emerge man page or refer to the Gentoo Handbook. I tried to add or to remove the bindist flag, but it does not change anything. octave-forge-gsl was installed in Jan 2010. root@moose:/usr/local/portage/app-misc(35)# genlop -t octave-forge-gsl * sci-mathematics/octave-forge-gsl Thu Jan 21 15:36:26 2010 >>> sci-mathematics/octave-forge-gsl-1.0.8 merge time: 35 seconds. Reproducible: Always root@lynx:/root(8)# emerge --info octave-forge-gsl Portage 2.1.9.16 (default/linux/amd64/10.0/desktop, gcc-4.5.1, glibc-2.12.1-r1, 2.6.35-gentoo-r10 x86_64) ================================================================= System Settings ================================================================= System uname: Linux-2.6.35-gentoo-r10-x86_64-Intel-R-_Core-TM-2_Duo_CPU_T8300_@_2.40GHz-with-gentoo-2.0.1 Timestamp of tree: Tue, 12 Oct 2010 09:30:20 +0000 app-shells/bash: 4.1_p9 dev-java/java-config: 2.1.11 dev-lang/python: 2.6.6, 3.1.2-r4 dev-util/cmake: 2.8.1-r2 sys-apps/baselayout: 2.0.1 sys-apps/openrc: 0.6.3 sys-apps/sandbox: 2.3-r1 sys-devel/autoconf: 2.13, 2.68 sys-devel/automake: 1.7.9-r2, 1.8.5-r4, 1.9.6-r3, 1.10.3, 1.11.1 sys-devel/binutils: 2.20.1-r1 sys-devel/gcc: 4.4.4-r2, 4.5.1 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.10 sys-devel/make: 3.81-r2 virtual/os-headers: 2.6.35 (sys-kernel/linux-headers) ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA PUEL dlj-1.1 skype-eula googleearth AdobeFlash-10.1 cadsoft" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=nocona -O2 -pipe -fomit-frame-pointer" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=nocona -O2 -pipe -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests binpkg-logs distlocks fixlafiles fixpackages news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch" FFLAGS="-march=nocona -O2 -pipe -fomit-frame-pointer" GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://vlaai.snt.ipv6.utwente.nl/pub/os/linux/gentoo/" LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LINGUAS="de fr" MAKEOPTS="-j1" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/lordvan /var/lib/layman/x11 /var/lib/layman/java-overlay /var/lib/layman/sunrise /var/lib/layman/arcon /var/lib/layman/science /var/lib/layman/pro-audio /var/lib/layman/qting-edge /var/lib/layman/n4g /var/lib/layman/ibormuth /usr/local/portage /var/lib/cpan" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="64bit R X Xaw3d a52 aac abiword acl acpi admin afs alsa amd64 ao apache2 applet archive arpack asf aspell assistant audacious audiofile automap automount bash-completion beagle berkdb blas blast bluetooth boo boost branding bzip2 cairo cardbus cdda cddb cdf cdio cdparanoia cdr cg cgi chm cli consolekit corba cracklib crypt css cuda cups curl cxx daap db dbase dbi dbm dbus designer devhelp device-mapper dga dia djvu doc dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds elf emacs emboss empathy encode epiphany evo examples exif expat extensions extra extras fam fame ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fpx fts3 fuse galago garmin gd gdal gdbm gedit geoip geolocation geos gif gimp ginac git glade glib gml gmp gmtsuppl gnokii gnome gnome-keyring gnome-print gnuplot gnutls gphoto2 gpm grammar graphics graphtft graphviz grass gs gsl gsm gstreamer gtk guile hal harness hddtemp hdf hdf5 hdri hlapi http httpd hvm iconv icq icu id3 ide imagemagick imap innodb inotify ipod ipv6 irda ithreads jabber jadetex java java5 java6 jbig john jpeg jpeg2k kdrive kerberos kpathsea kqemu kvm ladspa lame lapack laptop latex latex3 lcms ldap lensfun libffi libgda libnotify libsamplerate lirc lua lzo mad mail maildir mailwrapper mapnik math matroska mikmod mkl mmx mmxext mng modules mono moonlight motif mozdevelop mozilla mp3 mp4 mpeg mpi mplayer mtp mudflap multilib musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking networkmanager nfs nls nntp nptl nptlonly nsplugin ntfs ntp numarray numeric nvidia obex objc ocaml octave odbc ogdi ogg ole openexr opengl openmp overview pae pam pango pcre pda pdf perl plotutils plugins png podcast policykit posix postgres postscript ppds pppd preview-latex proj projectx pstricks pulseaudio pymol python python-bindings qemu qhull qt3support qt4 quicktime readline reflection reiserfs rle romio rpc rrdcgi rrdtool samba sasl science sdl secure-delete semantic-desktop server session sip slang slp smbclient smp sms sndfile snmp soup sox speex spell sql sqlite sse sse2 ssl startup-notification stlport subtitles subversion suexec svg swig sysfs szip t1lib tcl tcpd tex tex4ht texmacs theora thinkpad threads thunderbird tidy tiff tk tntc tools truetype udev unicode usb userlocales utempter v4l2 video virtualbox vorbis wav webdav webdav-serf webkit wifi wmf wxwidgets x264 xattr xcb xemacs xext xine xml xmlreader xmlrpc xorg xpm xulrunner xv xvid xvmc zlib zvbi" ALSA_CARDS="intel8x0" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" CAMERAS="canon" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" DVB_CARDS="usb-wt220u" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev synaptics " KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de fr" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler ruby websvccommon xml" PHP_TARGETS="php-5.2" QEMU_SOFTMMU_TARGETS="i386 ppc ppc64 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby18 jruby" USERLAND="GNU" VIDEO_CARDS="nv nvidia nouveau vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS ================================================================= Package Settings ================================================================= sci-mathematics/octave-forge-gsl-1.0.8 was built with the following: USE="(multilib)" LDFLAGS="-Wl,-O1"
Also 'emerge -v1 octave-forge-meta' fails with the same error: root@moose:/usr/local/portage/app-misc(40)# emerge -v1 octave-forge-meta These are the packages that would be merged, in order: Calculating dependencies... done! !!! All ebuilds that could satisfy "sci-mathematics/octave-forge-gsl" have been masked. !!! One of the following masked packages is required to complete your request: - sci-mathematics/octave-forge-gsl-1.0.8 (masked by: invalid: DEPEND: USE flag 'bindist' referenced in conditional '!bindist?' is not in IUSE, invalid: RDEPEND: USE flag 'bindist' referenced in conditional '!bindist?' is not in IUSE) - sci-mathematics/octave-forge-gsl-1.0.7 (masked by: invalid: DEPEND: USE flag 'bindist' referenced in conditional '!bindist?' is not in IUSE, invalid: RDEPEND: USE flag 'bindist' referenced in conditional '!bindist?' is not in IUSE) (dependency required by "sci-mathematics/octave-forge-meta-1.0" [ebuild]) (dependency required by "octave-forge-meta" [argument]) Any idea is deeply appreciated.
Hi, octave-forge-* packages will be discontinued soon. please look at the g-octave application. Thanks
The installation of g-octave-0.4 fails with: ... Making output directory... Running Sphinx v1.0.4 ACCESS DENIED open_wr: /usr/lib64/python2.6/site-packages/sphinx/pycode/Grammar2.6.6.final.0.pickle loading pickled environment... not yet created ... --------------------------- ACCESS VIOLATION SUMMARY --------------------------- LOG FILE "/var/log/sandbox/sandbox-5258.log" VERSION 1.0 FORMAT: F - Function called FORMAT: S - Access Status FORMAT: P - Path as passed to function FORMAT: A - Absolute Path (not canonical) FORMAT: R - Canonical Path FORMAT: C - Command Line F: open_wr S: deny P: /usr/lib64/python2.6/site-packages/sphinx/pycode/Grammar2.6.6.final.0.pickle A: /usr/lib64/python2.6/site-packages/sphinx/pycode/Grammar2.6.6.final.0.pickle R: /usr/lib64/python2.6/site-packages/sphinx/pycode/Grammar2.6.6.final.0.pickle C: /usr/bin/python2.6 /usr/bin/sphinx-build -b html -d _build/doctrees . _build/html -------------------------------------------------------------------------------- Any hint?
(In reply to comment #3) > Any hint? > As workaround please emerge g-octave with USE="-doc", and open another bug for this issue. Thanks.
Hi Rafael, thanks for yor help. I wrote a new bug Bug#: 341153. And then I emerged successfully g-octave with USE="-doc". But if I try to use g-octave, I habe only problems: root@moose:/root(18)# g-octave --sync * "--sync" not available, please install g-octave-9999 if you want this. root@moose:/root(19)# g-octave -i gsl * I/O error - [Errno 2] No such file or directory: '/var/cache/g-octave/info.json' * Try run "g-octave" as root. * If you fell that this is a bug, please report to us. * Mail to: rafael@rafaelmartins.eng.br root@moose:/root(20)# id uid=0(root) gid=0(root) groups=0(root),1(bin),2(daemon),3(sys),4(adm),6(disk),10(wheel),11(floppy),20(dialout),26(tape),27(video),1221(nwaccess) root@moose:/root(21)# g-octave -l * I/O error - [Errno 2] No such file or directory: '/var/cache/g-octave/info.json' * Try run "g-octave" as root. * If you fell that this is a bug, please report to us. * Mail to: rafael@rafaelmartins.eng.br root@moose:/root(22)# id uid=0(root) gid=0(root) groups=0(root),1(bin),2(daemon),3(sys),4(adm),6(disk),10(wheel),11(floppy),20(dialout),26(tape),27(video),1221(nwaccess) root@moose:/root(23)# g-octave -i * I/O error - [Errno 2] No such file or directory: '/var/cache/g-octave/info.json' * Try run "g-octave" as root. * If you fell that this is a bug, please report to us. * Mail to: rafael@rafaelmartins.eng.br Do you still have a hint for me?
(In reply to comment #5) > Do you still have a hint for me? > I suppose that you missed the einfo message warning you about run `emerge --config g-octave`. This command will install the package database for you. `g-octave --sync` only works for the live ebuild. The ebuilds for releases comes with a package database, that is installed by `emerge --config g-octave`. Thanks
Thanks once more Rafael, After 'emerge --config g-octave' 'g-octave -i gsl' seems to work, but 'g-octave --sync' still fails: root@condor:/root(28)# emerge --config g-octave Configuring pkg... * Extracting g-octave database files to: /var/cache/g-octave root@condor:/root(29)# g-octave --sync * "--sync" not available, please install g-octave-9999 if you want this. root@condor:/root(30)# g-octave -i gsl * Creating overlay: /var/lib/g-octave ... [ ok ] Package: GSL Version: 1.0.8 Date: 2009-05-03 Maintainer: Teemu Ikonen <tpikonen@pcu.helsinki.fi> Description: Octave bindings to the GNU Scientific Library Categories: None License: GPL version 2 or later Url: http://octave.sf.net
Hi Sebastian, I have a question to comment 2. Is there something equivalent to 'emerge -vD octave-forge-meta' with g-octave?
Still an other problem, I can't install octave-forge-gsl with g-octave: root@moose:/root(16)# emerge --config g-octave Configuring pkg... * Extracting g-octave database files to: /var/cache/g-octave root@moose:/root(17)# g-octave -puv gsl * Creating overlay: /var/lib/g-octave ... [ ok ] * Creating ebuild: g-octave/gsl-1.0.8.ebuild >>> Downloading 'https://octave.svn.sourceforge.net/svnroot/octave/trunk/octave-forge/packages/package_Makefile.in' --2010-10-18 21:35:42-- https://octave.svn.sourceforge.net/svnroot/octave/trunk/octave-forge/packages/package_Makefile.in Connecting to 10.101.10.254:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 4035 (3.9K) [text/plain] Saving to: `/usr/portage_moose/distfiles/g-octave_Makefile' 100%[===============================================================================================================================>] 4,035 --.-K/s in 0s 2010-10-18 21:35:47 (54.0 MB/s) - `/usr/portage_moose/distfiles/g-octave_Makefile' saved [4035/4035] >>> Downloading 'https://octave.svn.sourceforge.net/svnroot/octave/trunk/octave-forge/packages/package_configure.in' --2010-10-18 21:35:47-- https://octave.svn.sourceforge.net/svnroot/octave/trunk/octave-forge/packages/package_configure.in Connecting to 10.101.10.254:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 75 [text/plain] Saving to: `/usr/portage_moose/distfiles/g-octave_configure' 100%[===============================================================================================================================>] 75 --.-K/s in 0s 2010-10-18 21:35:47 (4.31 MB/s) - `/usr/portage_moose/distfiles/g-octave_configure' saved [75/75] >>> Creating Manifest for /var/lib/g-octave/g-octave/gsl * Ebuild class error - Package not found: /gsl-1.0.8 * If you fell that this is a bug, please report to us. * Mail to: rafael@rafaelmartins.eng.br root@moose:/root(18)# g-octave -i gsl Package: GSL Version: 1.0.8 Date: 2009-05-03 Maintainer: Teemu Ikonen <tpikonen@pcu.helsinki.fi> Description: Octave bindings to the GNU Scientific Library Categories: None License: GPL version 2 or later Url: http://octave.sf.net root@moose:/root(19)# g-octave -uv gsl * Ebuild class error - Package not found: /gsl-1.0.8 * If you fell that this is a bug, please report to us. * Mail to: rafael@rafaelmartins.eng.br
The next try works: root@moose:/root(24)# g-octave -v gsl These are the packages that would be merged, in order: Calculating dependencies... done! [ebuild N ] g-octave/gsl-1.0.8 0 kB [1] ... >>> /usr/libexec/octave/packages/gsl-1.0.8/x86_64-pc-linux-gnu-api-v37/coupling_6j.oct * Registering g-octave/gsl-1.0.8 on the Octave package database. >>> Recording g-octave/gsl in "world" favorites file... >>> Auto-cleaning packages... >>> No outdated packages were found on your system. * GNU info directory index is up-to-date.
please open other a bug for each issue. thanks.