emerge failes with ../lib/autofs.a(master.o): In function `master_do_mount': /var/tmp/portage/net-fs/autofs-5.0.3-r6/work/autofs-5.0.3/lib/master.c:969: undefined reference to `pthread_create' collect2: ld returned 1 exit status make[1]: *** [automount] Error 1 make[1]: Leaving directory `/var/tmp/portage/net-fs/autofs-5.0.3-r6/work/autofs-5.0.3/daemon' make: *** [daemon] Error 2 $ emerge --info Portage 2.2_rc33 (default/linux/amd64/2008.0, gcc-4.3.3-asneeded, glibc-2.9_p20081201-r2, 2.6.29-gentoo-r5 x86_64) ================================================================= System uname: Linux-2.6.29-gentoo-r5-x86_64-Intel-R-_Core-TM-2_Quad_CPU_Q6600_@_2.40GHz-with-gentoo-2.0.1 Timestamp of tree: Tue, 21 Jul 2009 06:15:02 +0000 distcc 3.1 x86_64-pc-linux-gnu [disabled] ccache version 2.4 [enabled] app-shells/bash: 3.2_p39 dev-java/java-config: 2.1.8-r1 dev-lang/python: 2.6.2-r1 dev-python/pycrypto: 2.0.1-r8 dev-util/ccache: 2.4-r7 dev-util/cmake: 2.6.4-r1 sys-apps/baselayout: 2.0.1 sys-apps/openrc: 0.4.3-r3 sys-apps/sandbox: 1.6-r2 sys-devel/autoconf: 2.13, 2.63 sys-devel/automake: 1.7.9-r1, 1.9.6-r2, 1.10.2 sys-devel/binutils: 2.18-r3 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.2.6a virtual/os-headers: 2.6.29 ABI="amd64" ACCEPT_KEYWORDS="amd64" ALSA_CARDS="hda-intel" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" ANT_HOME="/usr/share/ant" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" APBS_PSIZE="/usr/lib64/python2.6/site-packages/pdb2pqr/src/psize.py" ARCH="amd64" ARIA2="/usr/lib64/python2.6/site-packages/aria" ASFLAGS_x86="--32" AUTOCLEAN="yes" BINTYPE="linux9" CBUILD="x86_64-pc-linux-gnu" CCACHE_DIR="/home/ccache64" CCACHE_SIZE="3G" CDEFINE_amd64="__x86_64__" CDEFINE_x86="__i386__" CFLAGS="-O2 -march=core2 -pipe -fomit-frame-pointer -mssse3 -mcx16 -mmmx -g" CFLAGS_x86="-m32" CHOST="x86_64-pc-linux-gnu" CHOST_amd64="x86_64-pc-linux-gnu" CHOST_x86="i686-pc-linux-gnu" CLEAN_DELAY="5" CNS_CONFDB="/usr/share/cns/libraries/confdb" CNS_DATA="/usr/share/cns" CNS_DOC="/usr/share/doc/cns-1.2.1-r1" CNS_HELPLIB="/usr/share/cns/helplib" CNS_LIB="/usr/share/cns/libraries" CNS_MODULE="/usr/share/cns/modules" CNS_NMRLIB="/usr/share/cns/libraries/nmr" CNS_NMRMODULE="/usr/share/cns/modules/nmr" CNS_ROOT="/usr" CNS_SOLVE="/usr" CNS_TOPPAR="/usr/share/cns/libraries/toppar" CNS_XRAYLIB="/usr/share/cns/libraries/xray" CNS_XTALLIB="/usr/share/cns/libraries/xtal" CNS_XTALMODULE="/usr/share/cns/modules/xtal" COLLISION_IGNORE="/lib/modules" COLUMNS="279" CONFIG_PROTECT="/etc /usr/share/hddtemp/ /usr/share/nano /var/lib/hsqldb" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/udev/rules.d" COOT_REFMAC_LIB_DIR="/usr/share/ccp4/" COOT_REF_STRUCTS="/usr/share/coot/reference-structures/" CVS_RSH="ssh" CXXFLAGS="-O2 -march=core2 -pipe -fomit-frame-pointer -mssse3 -mcx16 -mmmx -g" DCCC_PATH="/usr/lib64/distcc/bin" DEFAULT_ABI="amd64" DISTCC_LOG="" DISTCC_VERBOSE="" DISTDIR="/usr/portage/distfiles" DYNAMO_DIR="/opt/nmrpipe/dynamo" DYNAMO_KEY="2002084" DYNAMO_PARAMS="/opt/nmrpipe/dynamo/params" EBZR_STORE_DIR="/data/bzr-src/" ECHANGELOG_USER="Justin Lecher (jlec) <jlec@j-schmitz.net>" EDITOR="/bin/nano" EGIT_STORE_DIR="/data/git-src/" ELIBC="glibc" EMERGE_DEFAULT_OPTS="--verbose --jobs=7 --load-average=8 --keep-going -t" EMERGE_WARNING_DELAY="10" ESVN_STORE_DIR="/data/svn-src/" FCFLAGS="-O2 -march=core2 -pipe -fomit-frame-pointer -mssse3 -mcx16 -mmmx -g" FEATURES="ccache collision-protect distlocks fixpackages multilib-strict noinfo notitles parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unmerge-orphans userfetch userpriv usersandbox usersync" FETCHCOMMAND="/usr/bin/axel -a -o ${DISTDIR}/${FILE} ${URI}" FFLAGS="-O2 -march=core2 -pipe -fomit-frame-pointer -mssse3 -mcx16 -mmmx -g" FLTK_DOCDIR="/usr/share/doc/fltk-1.1.7-r2/html" GCC_SPECS="/usr/lib/gcc/x86_64-pc-linux-gnu/4.3.3/asneeded.specs" GDK_USE_XFT="1" GENTOO_MIRRORS="http://gentoo.j-schmitz.net/mirror/ ftp://ftp.gentoo.mesh-solutions.com/gentoo/ ftp://ftp.tu-clausthal.de/pub/linux/gentoo/ ftp://de-mirror.org/distro/gentoo/ ftp://linux.rz.ruhr-uni-bochum.de/gentoo-mirror/" GKLIB="/opt/usf-lib/" GNOME_KEYRING_PID="7742" GNOME_KEYRING_SOCKET="/tmp/keyring-O3hnoP/socket" GUILE_LOAD_PATH="/usr/share/guile/1.8" HISTCONTROL="ignoredups" HISTFILESIZE="2000" HISTIGNORE="fg:bg" HISTSIZE="2000" HOME="/home/justin" INFOPATH="/usr/share/info:/usr/share/binutils-data/x86_64-pc-linux-gnu/2.18/info:/usr/share/gcc-data/x86_64-pc-linux-gnu/4.3.3/info" INPUT_DEVICES="keyboard mouse evdev" I_KNOW_WHAT_I_AM_DOING="yes" JAVAC="/home/justin/.gentoo/java-config-2/current-user-vm/bin/javac" JAVA_HOME="/home/justin/.gentoo/java-config-2/current-user-vm" JDK_HOME="/home/justin/.gentoo/java-config-2/current-user-vm" KERNEL="linux" LANG="en_GB.UTF-8" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LC_CTYPE="en_GB.UTF-8" LDFLAGS="-Wl,-O1,--hash-style=gnu,--sort-common,--as-needed" LDFLAGS_x86="-m elf_i386" LESS="-R -M --shift 5" LESSOPEN="|lesspipe.sh %s" LIBDIR_amd64="lib64" LIBDIR_amd64_fbsd="lib64" LIBDIR_ppc="lib32" LIBDIR_ppc64="lib64" LIBDIR_sparc32="lib32" LIBDIR_sparc64="lib64" LIBDIR_x86="lib32" LIBDIR_x86_fbsd="lib32" LINES="80" LINGUAS="en" LOGNAME="justin" LS_COLORS="rs=0:di=01;34:ln=01;36:hl=44;37:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.pdf=00;32:*.ps=00;32:*.txt=00;32:*.patch=00;32:*.diff=00;32:*.log=00;32:*.tex=00;32:*.doc=00;32:*.aac=00;36:*.au=00;36:*.flac=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.axa=00;36:*.oga=00;36:*.spx=00;36:*.xspf=00;36:" MAKEOPTS="-j12 -l8" MANPATH="/home/justin/.gentoo/java-config-2/current-user-vm/man:/usr/local/share/man:/usr/share/man:/usr/share/binutils-data/x86_64-pc-linux-gnu/2.18/man:/usr/share/gcc-data/x86_64-pc-linux-gnu/4.3.3/man:/opt/intel/cce/10.1.018/man:/opt/intel/fce/10.1.018/man:/etc/java-config/system-vm/man/:/opt/nmrpipe/man:/opt/vmware/server/man" MPD_CONF_FILE="@MPD_CONF_FILE_DIR@/mpd.conf" MP_SET_NUMTHREADS="1" MULTILIB_ABIS="amd64 x86" MULTILIB_STRICT_DENY="64-bit.*shared object" MULTILIB_STRICT_DIRS="/lib32 /lib /usr/lib32 /usr/lib /usr/kde/*/lib32 /usr/kde/*/lib /usr/qt/*/lib32 /usr/qt/*/lib /usr/X11R6/lib32 /usr/X11R6/lib" MULTILIB_STRICT_EXEMPT="(perl5|gcc|gcc-lib|binutils|eclipse-3|debug|portage)" NETBEANS="apisupport cnd groovy gsf harness ide identity j2ee java mobility nb php profiler soa visualweb webcommon websvccommon xml" NMRBASE="/opt/nmrpipe" NMRTXT="/opt/nmrpipe/nmrtxt" NOCOLOR="true" OMP_NUM_THREADS="4" OPENGL_PROFILE="nvidia" PAGER="/usr/bin/less" PATH="/data/scripts:/bin:/usr/bin" PDBH_BASE="/opt/nmrpipe/pdb" PDBH_DIR="/opt/nmrpipe/pdb/pdbH" PDBH_LIST="/opt/nmrpipe/pdb/pdbH.list" PDBH_TAB="/opt/nmrpipe/pdb/resolution.tab" PKGDIR="/usr/portage/packages" PORTAGE_ARCHLIST="ppc x86-openbsd ppc-openbsd ppc64 x86-winnt x86-fbsd ppc-aix alpha arm x86-freebsd s390 amd64 x86-macos x64-openbsd ia64-hpux hppa x86-netbsd amd64-linux ia64-linux x86 sparc-solaris x64-freebsd sparc64-solaris x86-linux x64-macos sparc m68k-mint ia64 mips ppc-macos x86-interix x64-solaris amd64-fbsd mips-irix m68k sh x86-solaris sparc-fbsd" PORTAGE_BINHOST_CHUNKSIZE="3000" PORTAGE_BIN_PATH="/usr/lib64/portage/bin" PORTAGE_COMPRESS_EXCLUDE_SUFFIXES="css gif htm[l]? jp[e]?g js pdf png" PORTAGE_CONFIGROOT="/" PORTAGE_DEBUG="0" PORTAGE_DEPCACHEDIR="/var/cache/edb/dep" PORTAGE_ELOG_CLASSES="info warn error log qa *" PORTAGE_ELOG_MAILFROM="portage@localhost" PORTAGE_ELOG_MAILSUBJECT="[portage] ebuild log for ${PACKAGE} on ${HOST}" PORTAGE_ELOG_MAILURI="root" PORTAGE_ELOG_SYSTEM="save echo" PORTAGE_FETCH_CHECKSUM_TRY_MIRRORS="5" PORTAGE_FETCH_RESUME_MIN_SIZE="350K" PORTAGE_GID="250" PORTAGE_INST_GID="0" PORTAGE_INST_UID="0" PORTAGE_PYM_PATH="/usr/lib64/portage/pym" PORTAGE_REPO_DUPLICATE_WARN="0" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_RSYNC_RETRIES="3" PORTAGE_TMPDIR="/var/tmp" PORTAGE_VERBOSE="1" PORTAGE_WORKDIR_MODE="0700" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/data/layman/java-overlay /data/local/molmod/trunk /data/local/molmod/branches /data/local/sunrise/sunrise /data/local/sunrise/reviewed /data/local/dberkholz /data/local/allenjb /data/local/java-experimental /data/local/science /data/local/private-overlay" PRELINK_PATH_MASK="/lib/modules:/usr/lib/locale:/usr/lib/wine:/usr/lib/valgrind:*.la:*.png:*.py:*.pl:*.pm:*.sh:*.xml:*.xslt:*.a:*.js:/usr/lib64/klibc" PROFILE_ONLY_VARIABLES="ARCH ELIBC KERNEL USERLAND" PWD="/data/etc" PYMOL_DATA="/usr/share/pymol/data" PYMOL_PATH="/usr/lib64/python2.6/site-packages/pymol" PYMOL_SCRIPTS="/usr/share/pymol/scripts" QUICKPKG_DEFAULT_OPTS="--umask=0011 --include-config=y" RESUMECOMMAND="/usr/bin/axel -a -o ${DISTDIR}/${FILE} ${URI}" ROOT="/" ROOTPATH="/opt/bin:/usr/x86_64-pc-linux-gnu/gcc-bin/4.3.3:/opt/intel/cce/10.1.018/bin:/opt/intel/fce/10.1.018/bin:/opt/vmware/server/bin:/opt/vmware/vix/bin:/data/scripts/" RPMDIR="/usr/portage/rpm" SHELL="/bin/bash" SHLVL="5" SSH_AUTH_SOCK="/tmp/keyring-O3hnoP/socket.ssh" SSH_CLIENT="134.94.85.9 40296 22" SSH_CONNECTION="134.94.85.9 40296 10.0.0.100 22" SSH_TTY="/dev/pts/0" STAGE1_USE="multilib nptl nptlonly unicode" STY="7781.pts-0.whitebox" SURF_DIR="/opt/nmrpipe/dynamo/surface" SYMLINK_LIB="yes" SYNC="rsync://rsync.j-schmitz.net/gentoo-portage" TERM="screen" TERMCAP="SC|screen|VT 100/ANSI X3.64 virtual terminal:\ :DO=\E[%dB:LE=\E[%dD:RI=\E[%dC:UP=\E[%dA:bs:bt=\E[Z:\ :cd=\E[J:ce=\E[K:cl=\E[H\E[J:cm=\E[%i%d;%dH:ct=\E[3g:\ :do=^J:nd=\E[C:pt:rc=\E8:rs=\Ec:sc=\E7:st=\EH:up=\EM:\ :le=^H:bl=^G:cr=^M:it#8:ho=\E[H:nw=\EE:ta=^I:is=\E)0:\ :li#79:co#279:am:xn:xv:LP:sr=\EM:al=\E[L:AL=\E[%dL:\ :cs=\E[%i%d;%dr:dl=\E[M:DL=\E[%dM:dc=\E[P:DC=\E[%dP:\ :im=\E[4h:ei=\E[4l:mi:IC=\E[%d@:ks=\E[?1h\E=:\ :ke=\E[?1l\E>:vi=\E[?25l:ve=\E[34h\E[?25h:vs=\E[34l:\ :ti=\E[?1049h:te=\E[?1049l:us=\E[4m:ue=\E[24m:so=\E[3m:\ :se=\E[23m:mb=\E[5m:md=\E[1m:mr=\E[7m:me=\E[m:ms:\ :Co#8:pa#64:AF=\E[3%dm:AB=\E[4%dm:op=\E[39;49m:AX:\ :vb=\Eg:G0:as=\E(0:ae=\E(B:\ :ac=\140\140aaffggjjkkllmmnnooppqqrrssttuuvvwwxxyyzz{{||}}~~..--++,,hhII00:\ :po=\E[5i:pf=\E[4i:k0=\E[10~:k1=\EOP:k2=\EOQ:k3=\EOR:\ :k4=\EOS:k5=\E[15~:k6=\E[17~:k7=\E[18~:k8=\E[19~:\ :k9=\E[20~:k;=\E[21~:F1=\E[23~:F2=\E[24~:F3=\E[25~:\ :F4=\E[26~:F5=\E[28~:F6=\E[29~:F7=\E[31~:F8=\E[32~:\ :F9=\E[33~:FA=\E[34~:kb=:K1=\EOw:K2=\EOu:K3=\EOy:\ :K4=\EOq:K5=\EOs:kB=\E[Z:kE=\E[8\^:*4=\E[3$:*7=\E[8$:\ :#2=\E[7$:#3=\E2$:#4=\E[d:%c=\E[6$:%e=\E[5$:%i=\E[c:\ :kh=\E[1~:@1=\E[1~:kH=\E[4~:@7=\E[4~:kN=\E[6~:kP=\E[5~:\ :kI=\E[2~:kD=\E[3~:ku=\EOA:kd=\EOB:kr=\EOC:kl=\EOD:km:" USE="7zip X acl acpi additions alsa amd64 automount bash-completion berkdb blas branding bzip2 cairo cblas cli cracklib cups custom-optimization cxx dbus deprecated discouraged double-precision dri dts dvb dvdr emboss fastcgi fbcon fbcondecor fbsplash fftw fortran gd gdbm gecko gif glibc-omitfp gmp gnome gnome-keyring gpm grub gtk hal hddtemp icc iconv ifc imlib isdnlog java javascript jpeg lapack largefile libsexy libv4l2 lm_sensors md5sum midi mmap mmx mmxext mp3 mudflap multicall multilib multiprocess multiuser nano-syntax ncurses networking nls nptl nptlonly nsplugin numpy nvidia opengl openmp optimize-cflags pam pcre perl png pppd pymol python qt-static readline reflection rrdcgi rtsp sdl sensord session smp spl sse sse2 ssl ssse3 startup-notification svg swat sysfs tcpd tiff truetype type1 unicode v4l v4l2 vorbis x264 xcomposite xorg xulrunner zlib" ALSA_CARDS="hda-intel" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en" USERLAND="GNU" VIDEO_CARDS="nvidia v4l" USER="justin" USERLAND="GNU" USE_EXPAND="ALSA_CARDS ALSA_PCM_PLUGINS APACHE2_MODULES APACHE2_MPMS CAMERAS CROSSCOMPILE_OPTS DVB_CARDS ELIBC FCDSL_CARDS FOO2ZJS_DEVICES FRITZCAPI_CARDS INPUT_DEVICES KERNEL LCD_DEVICES LINGUAS LIRC_DEVICES MISDN_CARDS NETBEANS_MODULES QEMU_SOFTMMU_TARGETS QEMU_USER_TARGETS SANE_BACKENDS USERLAND VIDEO_CARDS" USE_EXPAND_HIDDEN="CROSSCOMPILE_OPTS ELIBC KERNEL USERLAND" USE_ORDER="env:pkg:conf:defaults:pkginternal:env.d" VIDEO_CARDS="nvidia v4l" WINDOW="1" XCURSORS_THEME="Jimmac" XDG_CONFIG_DIRS="/etc/xdg" XDG_DATA_DIRS="/usr/local/share:/usr/share:/usr/share/gdm" XDG_SESSION_COOKIE="f61380aebc7a1c37956b884349a40094-1248158420.256730-1140888521" _="/usr/bin/emerge" _POSIX2_VERSION="199209"
Created attachment 198735 [details] /var/tmp/portage/net-fs/autofs-5.0.3-r6/temp/build.log build.log
perhaps we should get autofs-5.0.4 stable!! *** This bug has been marked as a duplicate of bug 247969 ***
