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Bug 260147 - <=KDE 4.4.1, nepomuk & sesame: Java HotSpot errors -> hs_err_pid*.log
Summary: <=KDE 4.4.1, nepomuk & sesame: Java HotSpot errors -> hs_err_pid*.log
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] KDE (show other bugs)
Hardware: All Linux
: High normal (vote)
Assignee: Gentoo KDE team
URL:
Whiteboard:
Keywords:
: 311465 (view as bug list)
Depends on:
Blocks:
 
Reported: 2009-02-24 16:57 UTC by Manfred Knick
Modified: 2010-07-07 18:57 UTC (History)
9 users (show)

See Also:
Package list:
Runtime testing required: ---
tampakrap: Bugday?


Attachments
example : one of the error log files (hs_err_pid5957.log,34.71 KB, text/plain)
2009-02-24 16:59 UTC, Manfred Knick
Details

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Description Manfred Knick 2009-02-24 16:57:51 UTC
Running KDE with apps like konsole, firefox, thunderbird,
error files hs_err_pid*.log are being produced in my ~ dir.

Reproducible: Always

Steps to Reproduce:
1.Install KDE 4.0.2
2.Run Apps
3.Observe ~

Actual Results:  
Error log files keep being produced.

Expected Results:  
None any more.

 # equery belongs libjvm.so
[ Searching for file(s) libjvm.so in *... ]
dev-java/sun-jdk-1.6.0.12 (/opt/sun-jdk-1.6.0.12/jre/lib/amd64/server/libjvm.so)
dev-java/blackdown-jdk-1.4.2.03-r16 (/opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/server/libjvm.so)
dev-java/sun-jdk-1.5.0.17 (/opt/sun-jdk-1.5.0.17/jre/lib/amd64/server/libjvm.so)
app-emulation/emul-linux-x86-java-1.6.0.12 (/opt/emul-linux-x86-java-1.6.0.12/lib/i386/client/libjvm.so)
app-emulation/emul-linux-x86-java-1.6.0.12 (/opt/emul-linux-x86-java-1.6.0.12/lib/i386/server/libjvm.so)
Comment 1 Manfred Knick 2009-02-24 16:58:44 UTC
$ emerge --info
Portage 2.1.6.7 (default/linux/amd64/2008.0/desktop, gcc-4.3.3, glibc-2.9_p20081201-r1, 2.6.28-gentoo-r2 x86_64)
=================================================================
System uname: Linux-2.6.28-gentoo-r2-x86_64-AMD_Athlon-tm-_64_X2_Dual_Core_Processor_5600+-with-glibc2.2.5
Timestamp of tree: Tue, 24 Feb 2009 15:45:01 +0000
app-shells/bash:     3.2_p39
dev-java/java-config: 1.3.7-r1, 2.1.6-r1
dev-lang/python:     2.5.2-r7
dev-util/cmake:      2.6.2-r1
sys-apps/baselayout: 1.12.11.1
sys-apps/sandbox:    1.2.18.1-r2
sys-devel/autoconf:  2.13, 2.63
sys-devel/automake:  1.4_p6, 1.5, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2
sys-devel/binutils:  2.18-r3
sys-devel/gcc-config: 1.4.0-r4
sys-devel/libtool:   1.5.26
virtual/os-headers:  2.6.27-r2
ACCEPT_KEYWORDS="amd64"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/lib64/fax /usr/share/config /var/lib/hsqldb /var/spool/fax/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c /etc/udev/rules.d"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="distlocks fixpackages parallel-fetch protect-owned sandbox sfperms strict unmerge-orphans userfetch"
GENTOO_MIRRORS="http://de-mirror.org/distro/gentoo/"
LANG="de_DE.UTF8"
LC_ALL="de_DE.UTF8"
LDFLAGS="-Wl,-O1"
LINGUAS="de"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/Storage-B/Portage_tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage/local-overlay"
SYNC="rsync://rsync.de.gentoo.org/gentoo-portage"
USE="X acl acpi alsa amd64 apache2 bash-completion berkdb bluetooth branding bzip2 cairo cdr cli cracklib crypt cups dbus doc dri dvb dvd dvdr dvdread eds emboss encode esd evo examples fam fax firefox firefox3 foomaticdb fortran gdbm gif gimp gnome gphoto2 gpm gstreamer gtk hal hbci htmlhandbook iconv ipv6 isdnlog jadetex java jce jpeg kde kvm ldap libnotify mad maildir mbox midi mikmod mmx mp3 mpeg mudflap multilib mysql ncurses nls nptl nptlonly nsplugin ogg opengl openmp pam pcre pdf perl png ppds pppd python qt3 qt3support qt4 quicktime readline reflection samba sasl scanner sdl session spell spl sse sse2 sse3 sse4.1 sse4.2 sse4a sse5 ssl startup-notification svg sysfs tcpd tiff truetype unicode usb v4l v4l2 vorbis webkit xcomposite xml xorg xulrunner xv zlib zvbi" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" FRITZCAPI_CARDS="fcpci" INPUT_DEVICES="keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="de" MISDN_CARDS="avmfritz" USERLAND="GNU" VIDEO_CARDS="nvidia"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 2 Manfred Knick 2009-02-24 16:59:45 UTC
Created attachment 183035 [details]
example : one of the error log files
Comment 3 Manfred Knick 2009-02-24 17:03:20 UTC
Extracted from .log:

#
# An unexpected error has been detected by HotSpot Virtual Machine:
#
#  SIGSEGV (0xb) at pc=0x00007f6c6c0e2f00, pid=5953, tid=140103792633680
#
# Java VM: Java HotSpot(TM) 64-Bit Server VM (Blackdown-1.4.2-03 mixed mode)
# Problematic frame:
# V  [libjvm.so+0x2fcf00]
#

---------------  T H R E A D  ---------------

...


---------------  P R O C E S S  ---------------

...


Dynamic libraries:
00400000-00406000 r-xp 00000000 08:08 619271                             /usr/bin/nepomukservicestub
00605000-00606000 r--p 00005000 08:08 619271                             /usr/bin/nepomukservicestub
00606000-00607000 rw-p 00006000 08:08 619271                             /usr/bin/nepomukservicestub
00607000-007b2000 rw-p 00607000 00:00 0                                  [heap]
7f6c13328000-7f6c13329000 r--p 7f6c13328000 00:00 0 
7f6c13329000-7f6c134b6000 r--s 00000000 08:08 731213                     /usr/share/soprano/sesame2/openrdf-sesame-2.1.4-onejar.jar
7f6c134b6000-7f6c134b9000 r--s 00000000 08:08 420904                     /opt/blackdown-jdk-1.4.2.03/jre/lib/ext/dnsns.jar
7f6c134b9000-7f6c13575000 r--s 00000000 08:08 420905                     /opt/blackdown-jdk-1.4.2.03/jre/lib/ext/localedata.jar
7f6c13575000-7f6c13583000 r--s 00000000 08:08 420907                     /opt/blackdown-jdk-1.4.2.03/jre/lib/ext/ldapsec.jar
7f6c13583000-7f6c1359f000 r--s 00000000 08:08 420908                     /opt/blackdown-jdk-1.4.2.03/jre/lib/ext/sunjce_provider.jar
7f6c1359f000-7f6c136a0000 rwxp 7f6c1359f000 00:00 0 

...

7f6c6991b000-7f6c69ebd000 r--s 00000000 08:08 420949                     /opt/blackdown-jdk-1.4.2.03/jre/lib/charsets.jar
7f6c69ebd000-7f6c69f9a000 r--s 00000000 08:08 420384                     /opt/blackdown-jdk-1.4.2.03/jre/lib/jsse.jar
7f6c69f9a000-7f6c69fe4000 rw-p 7f6c69f9a000 00:00 0 
7f6c69fe4000-7f6c6b98e000 r--s 00000000 08:08 420912                     /opt/blackdown-jdk-1.4.2.03/jre/lib/rt.jar
7f6c6b98e000-7f6c6b99f000 r-xp 00000000 08:08 420363                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/libzip.so
7f6c6b99f000-7f6c6ba9e000 ---p 00011000 08:08 420363                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/libzip.so
7f6c6ba9e000-7f6c6baa2000 rw-p 00010000 08:08 420363                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/libzip.so
7f6c6baa2000-7f6c6bac2000 r-xp 00000000 08:08 420366                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/libjava.so
7f6c6bac2000-7f6c6bbc2000 ---p 00020000 08:08 420366                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/libjava.so
7f6c6bbc2000-7f6c6bbc7000 rw-p 00020000 08:08 420366                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/libjava.so
7f6c6bbc7000-7f6c6bbd9000 r-xp 00000000 08:08 420376                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/libverify.so
7f6c6bbd9000-7f6c6bcd8000 ---p 00012000 08:08 420376                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/libverify.so
7f6c6bcd8000-7f6c6bcdb000 rw-p 00011000 08:08 420376                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/libverify.so
7f6c6bcdb000-7f6c6bce3000 r-xp 00000000 08:08 420381                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/native_threads/libhpi.so
7f6c6bce3000-7f6c6bde3000 ---p 00008000 08:08 420381                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/native_threads/libhpi.so
7f6c6bde3000-7f6c6bde5000 rw-p 00008000 08:08 420381                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/native_threads/libhpi.so
7f6c6bde5000-7f6c6bde6000 rw-p 7f6c6bde5000 00:00 0 
7f6c6bde6000-7f6c6c32b000 r-xp 00000000 08:08 420361                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/server/libjvm.so
7f6c6c32b000-7f6c6c42a000 ---p 00545000 08:08 420361                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/server/libjvm.so
7f6c6c42a000-7f6c6c558000 rw-p 00544000 08:08 420361                     /opt/blackdown-jdk-1.4.2.03/jre/lib/amd64/server/libjvm.so
7f6c6c558000-7f6c6c58a000 rw-p 7f6c6c558000 00:00 0 

...


VM Arguments:
jvm_args: -verbose:jni,gc,class -Xms256m -Xmx256m
java_command: <unknown>
Launcher Type: generic

Environment Variables:
JAVA_HOME=/etc/java-config-2/current-system-vm
CLASSPATH=.
PATH=/usr/local/bin:/usr/bin:/bin:/opt/bin:/usr/x86_64-pc-linux-gnu/gcc-bin/4.3.3:/opt/blackdown-jdk-1.4.2.03/bin:/opt/blackdown-jdk-1.4.2.03/jre/bin:/usr/kde/3.5/bin:/usr/qt/3/bin:/usr/lib/subversion/bin:/usr/games/bin:/var/spool/fax/bin:~/bin:.
SHELL=/bin/bash
DISPLAY=:0


---------------  S Y S T E M  ---------------

OS:Gentoo Base System release 1.12.11.1

uname:Linux 2.6.28-gentoo-r2 #2 SMP Fri Feb 20 19:36:59 CET 2009 x86_64
libc:glibc 2.9 NPTL 2.9 
rlimit: STACK 8192k, CORE 0k, NPROC 36864, NOFILE 1024, AS infinity
load average:
Comment 4 Manfred Knick 2009-02-24 17:04:24 UTC
 # equery list java
[I--] [ ~] app-emulation/emul-linux-x86-java-1.6.0.12 (1.6)
[I--] [  ] dev-java/java-config-1.3.7-r1 (0)
[I--] [  ] dev-java/java-config-2.1.6-r1 (2)
[I--] [  ] dev-java/java-config-wrapper-0.15 (0)
[I--] [  ] dev-java/java-getopt-1.0.13 (1)
[I--] [  ] dev-java/java-sdk-docs-1.4.2 (1.4.2)
[I--] [  ] dev-java/java-sdk-docs-1.5.0-r1 (1.5.0)
[I--] [  ] dev-java/java-sdk-docs-1.6.0-r1 (1.6.0)
[I--] [  ] dev-java/javacup-0.10k-r1 (0)
[I--] [  ] dev-java/javatoolkit-0.3.0-r2 (0)
[I--] [  ] dev-java/libreadline-java-0.8.0-r2 (0)
[I--] [  ] dev-java/xjavac-20041208-r5 (1)

mammut ~ # equery list blackdown
[I--] [ ~] dev-java/blackdown-jdk-1.4.2.03-r16 (1.4.2)

Comment 5 Manfred Knick 2009-02-24 17:07:41 UTC
# equery depends dev-java/blackdown-jdk                                                                                                                                                                    

virtual/jdk-1.4.2 (=dev-java/blackdown-jdk-1.4.2*)                                                                                                                                                                   

# equery depends virtual/jdk-1.4.2                                                                                                                                                               

dev-db/hsqldb-1.8.0.10 (!java6? =virtual/jdk-1.4*)                                                                                                                                                        
dev-java/ant-core-1.7.1-r2 (>=virtual/jdk-1.4)
dev-java/ant-eclipse-ecj-3.3.0-r1 (>=virtual/jdk-1.4)
dev-java/ant-eclipse-ecj-3.4 (>=virtual/jdk-1.4)
dev-java/ant-nodeps-1.7.1 (>=virtual/jdk-1.4)
dev-java/ant-owanttask-1.1-r12 (>=virtual/jdk-1.4)
dev-java/ant-trax-1.7.1 (>=virtual/jdk-1.4)
dev-java/antlr-2.7.7 (>=virtual/jdk-1.3)
dev-java/asm-2.0-r1 (>=virtual/jdk-1.3)
dev-java/bcel-5.2 (>=virtual/jdk-1.4)
dev-java/bsh-2.0_beta4-r3 (>=virtual/jdk-1.4)
dev-java/cldc-api-1.1 (>=virtual/jdk-1.4)
dev-java/commons-daemon-1.0.1-r2 (>=virtual/jdk-1.4)
dev-java/commons-dbcp-1.2.2 (=virtual/jdk-1.4*)
dev-java/commons-el-1.0-r2 (>=virtual/jdk-1.4)
dev-java/commons-logging-1.1.1 (>=virtual/jdk-1.4)
dev-java/commons-pool-1.3 (>=virtual/jdk-1.4)
dev-java/eclipse-ecj-3.3.0-r3 (>=virtual/jdk-1.4)
dev-java/eclipse-ecj-3.4-r4 (!java6? >=virtual/jdk-1.4)
dev-java/gjdoc-0.7.8 (>=virtual/jdk-1.4)
dev-java/gnu-regexp-1.1.4-r2 (>=virtual/jdk-1.4)
dev-java/icu4j-3.8.1-r1 (!test? =virtual/jdk-1.4*)
                        (test? =virtual/jdk-1.4*)
dev-java/jakarta-jstl-1.1.2-r1 (=virtual/jdk-1.4*)
dev-java/jarjar-0.9 (>=virtual/jdk-1.4)
dev-java/java-getopt-1.0.13 (>=virtual/jdk-1.4)
dev-java/javacup-0.10k-r1 (>=virtual/jdk-1.3)
dev-java/jsch-0.1.37-r1 (>=virtual/jdk-1.4)
dev-java/junit-3.8.2-r1 (>=virtual/jdk-1.4)
dev-java/jzlib-1.0.7-r1 (>=virtual/jdk-1.4)
dev-java/libreadline-java-0.8.0-r2 (>=virtual/jdk-1.4)
dev-java/lucene-1.9.1 (>=virtual/jdk-1.4)
dev-java/lucene-analyzers-1.9.1-r1 (>=virtual/jdk-1.4)
dev-java/qdox-1.6.3 (>=virtual/jdk-1.4)
dev-java/servletapi-2.4-r5 (>=virtual/jdk-1.4)
dev-java/swt-3.4-r2 (>=virtual/jdk-1.4)
dev-java/tomcat-servlet-api-4.1.36 (>=virtual/jdk-1.4)
dev-java/tomcat-servlet-api-5.5.27 (!java5? =virtual/jdk-1.4*)
dev-java/xalan-2.7.1 (>=virtual/jdk-1.4)
dev-java/xalan-serializer-2.7.1 (>=virtual/jdk-1.4)
dev-java/xerces-2.9.1 (>=virtual/jdk-1.4)
dev-java/xjavac-20041208-r5 (>=virtual/jdk-1.4)
dev-java/xml-commons-external-1.3.04 (>=virtual/jdk-1.3)
dev-java/xml-commons-resolver-1.2 (>=virtual/jdk-1.3)
dev-lang/swig-1.3.36 (java? virtual/jdk)
dev-libs/cyrus-sasl-2.1.22-r2 (java? >=virtual/jdk-1.4)
media-libs/pdflib-7.0.3 (java? >=virtual/jdk-1.4)
net-dns/libidn-1.5-r1 (java? >=virtual/jdk-1.4)
net-libs/opal-3.4.4 (java? virtual/jdk)
net-libs/xulrunner-1.8.1.19 (java? >=virtual/jdk-1.4)
net-libs/xulrunner-1.9.0.6 (java? >=virtual/jdk-1.4)
net-misc/mDNSResponder-107.6-r5 (java? >=virtual/jdk-1.4)
net-misc/tightvnc-1.3.9-r2 (java? >=virtual/jdk-1.4)
sys-libs/db-4.5.20_p2-r1 (java? >=virtual/jdk-1.4)
Comment 6 Manfred Knick 2009-02-24 17:15:48 UTC
I'm a bit surprised about the firing of old blackdown,
although latest 1.6 being installed and available / working.

Same applies to browser plugins:

# eselect java-nsplugin list
Available 32-bit Java browser plugins
  [1]   emul-linux-x86-java-1.6
  [2]   emul-linux-x86-java-1.6-plugin2  current
Available 64-bit Java browser plugins
  [1]   sun-jdk-1.6  current


Unmerging old blackdown,
dev-java/blackdown-jdk-1.4.2 keeps being pulled in again 
by above listed virtual/jdk-1.4.2 dependencies.

$ echo $PATH
/usr/local/bin:/usr/bin:/bin:/opt/bin:/usr/x86_64-pc-linux-gnu/gcc-bin/4.3.3:/opt/blackdown-jdk-1.4.2.03/bin:/opt/blackdown-jdk-1.4.2.03/jre/bin:/usr/kde/3.5/bin:/usr/qt/3/bin:/usr/lib/subversion/bin:/usr/games/bin:/var/spool/fax/bin:~/bin:.

The *SUSPECTS* on first sight from the error log file:

# equery list soprano

[I--] [ ~] dev-libs/soprano-2.2 (0)

# equery list nepomuk

[I--] [ ~] kde-base/nepomuk-4.2.0 (4.2)
Comment 7 Manfred Knick 2009-02-25 10:17:09 UTC
OBSERVATION:

Repeatably, six error files are created directly after starting KDE:

 11:08 hs_err_pid13934.log
 11:08 hs_err_pid13944.log
 11:08 hs_err_pid13954.log
 11:08 hs_err_pid13965.log
 11:08 hs_err_pid13986.log
 11:08 hs_err_pid13996.log

"ps faux | grep <pid>" shows that none of these processes are left running - as expected.

At this time, only gkrellm, KTerminal and Dolphin are started with the KDE Desktop; no other komplex Apps running.
Comment 8 Manfred Knick 2009-02-25 10:28:57 UTC
(In reply to comment #7)

And it's always the same root error msg:

$ grep "\[libjvm.so" hs_err_pid*.log

hs_err_pid13934.log:# V  [libjvm.so+0x2fcf00]
hs_err_pid13934.log:V  [libjvm.so+0x2fcf00]

hs_err_pid13944.log:# V  [libjvm.so+0x2fcf00]
hs_err_pid13944.log:V  [libjvm.so+0x2fcf00]

hs_err_pid13954.log:# V  [libjvm.so+0x2fcf00]
hs_err_pid13954.log:V  [libjvm.so+0x2fcf00]

hs_err_pid13965.log:# V  [libjvm.so+0x2fcf00]
hs_err_pid13965.log:V  [libjvm.so+0x2fcf00]

hs_err_pid13986.log:# V  [libjvm.so+0x2fcf00]
hs_err_pid13986.log:V  [libjvm.so+0x2fcf00]

hs_err_pid13996.log:# V  [libjvm.so+0x2fcf00]
hs_err_pid13996.log:V  [libjvm.so+0x2fcf00]

Comment 9 Malte Starostik 2009-04-12 18:04:07 UTC
Same here.  Very annoying.
* dev-java/blackdown-jdk shouldn't have been installed in the first place.
  re-emerging dev-db/hsqldb with the java6 USE flag solved this for me.
* either way, the old java version shouldn't have been used by anything that
  works with the newer dev-java/sun-jdk
* under no circumstances should this bugger be allowed to pollute my $HOME
  like this.  IMNSHO this intolerable behaviour qualifies dev-java/blackdown
  for hard masking.
Comment 10 Jon 2009-04-30 16:27:36 UTC
I wanted to confirm this as well (on my Dual Core AMD64 system).  Unmerging blackdown-jdk seems to have stopped the errors from occurring.  Additionally I did not re-merge dev-db/hsqldb as I didn't actually have it installed in the first place, making me think that this has to just do with blackdown (unless hsqldb needs to be installed with the jdk and that's what's causing the error)

Agreed, however, very irritating.
Comment 11 Manfred Knick 2009-05-12 05:18:00 UTC
Still to be confirmed with KDE 4.2.3 :

# equery list kde-meta
...
[I--] [ ~] kde-base/kde-meta-4.2.3 (4.2)
Comment 12 Ryan Hill (RETIRED) gentoo-dev 2009-07-25 23:03:58 UTC
it's not just blackdown.

 A fatal error has been detected by the Java Runtime Environment:
#                                                                 
#  SIGSEGV (0xb) at pc=0x00007f3a9a2a32ba, pid=3698, tid=139889701930832
#                                                                       
# JRE version: 6.0_14-b08                                               
# Java VM: Java HotSpot(TM) 64-Bit Server VM (14.0-b16 mixed mode linux-amd64 )
# Problematic frame:                                                           
# V  [libjvm.so+0x26e2ba]         


dirtyepic@halo ~ $ qfile libjvm.so
dev-java/sun-jdk (/opt/sun-jdk-1.6.0.14/jre/lib/amd64/server/libjvm.so)
Comment 13 marov 2009-08-31 11:37:41 UTC
I had such problem with jvm. Portage can't uninstall jvm currectly so I had libjvm.so & java in different versions.
suggestion:
Look in /opt for installed jvm. Find an old versions, delete it & link folders to last jvm. 
!!! It's a bad suggestion but it's work for me.
P.s. Sorry for my bad english.
Comment 14 the lee 2009-09-19 19:38:51 UTC
I'll second that it's not just blackdown.

thelee@mondrian ~ $ equery b libjvm.so
[ Searching for file(s) libjvm.so in *... ]
dev-java/sun-jdk-1.6.0.15 (/opt/sun-jdk-1.6.0.15/jre/lib/i386/client/libjvm.so)
dev-java/sun-jdk-1.6.0.15 (/opt/sun-jdk-1.6.0.15/jre/lib/i386/server/libjvm.so)

I'll also confirm that this seems to happen the moment I log into KDE (4.2).  Nepomuk seems to be a contender for the perpetrator of this, but more importantly, shouldn't it be possible to redirect java hotspot error logs to some place more appropriate than my (or other users') $HOME?  like a /var/log file?
Comment 15 Vande Vonder Andre 2009-10-21 11:26:11 UTC
Hello,

I have exactly a same under my station.
I look where this file comes -> soprano 
Sub program of nepomuk

I SOLVE THIS -> under user account -> eselect java-vm set user xxxxx
xxx -> name or number of java-vm you use.

About my knowledge : soprano can't find or badly initialise java-vm without settings of java-vm for user


Comment 16 the lee 2009-10-21 16:06:17 UTC
I just tried eselecting a user-vm as you suggested it, but that doesn't fix the problem.  If I log back in again, all the hs_err_pid files appear again.
Comment 17 Vande Vonder Andre 2009-10-21 18:10:40 UTC
(In reply to comment #16)
> I just tried eselecting a user-vm as you suggested it, but that doesn't fix the
> problem.  If I log back in again, all the hs_err_pid files appear again.
> 
My process (this I use)
Close X (stop xdm by /etc/init.d/xdm stop)
Open console login for each user (I have 3 users) and set eselect java-vm
Move all hs_err* file to another location (for history of main users) or delete them (I perform delete for two account)
restart xdm 
From that I don't have any hs_err* file for any users

Sorry about my question: are you sure that hs_err file are not a historical files.
New files -> Accept my apologies. 
Comment 18 Luca Santarelli 2009-10-25 15:29:01 UTC
(In reply to comment #17)
> Sorry about my question: are you sure that hs_err file are not a historical
> files.
> New files -> Accept my apologies. 

I just tried your suggestion, but I still get the creation of hs_err_pid files.
Comment 19 Eric Bosch 2009-10-28 20:16:38 UTC
(In reply to comment #18)
> (In reply to comment #17)
> > Sorry about my question: are you sure that hs_err file are not a historical
> > files.
> > New files -> Accept my apologies. 
> I just tried your suggestion, but I still get the creation of hs_err_pid files.

I'm trying to fix this by first, unemerging all JDK and emul JDK, removing leftovers from /opt, and emerge -DuN world --with-bdeps .  we'll see.  I'll get back soon.
Comment 20 Eric Bosch 2009-10-28 20:39:58 UTC
Ok, I just finished all the cleanup, removed extra leftovers (emerge --depclean), and tested, all of my errors went away!!!
Comment 21 Quentin Conner 2009-11-02 17:12:45 UTC
In my case (KDE 4.3.2 on AMD64), I noticed the Nepomuk Soprano backend is Sesame2.  Sesame2 is using JRE 1.6 or sun-jdk-1.6.0_15  in my case.

By emerging sun-jdk-1.6.0_16 (currently ~amd64) the SEGVs went away.
Comment 22 Quentin Conner 2009-11-02 17:15:56 UTC
Correction:  KDE 4.3.1 on amd64.  I'm using the 10.0 Desktop profile.

# emerge --info
Portage 2.1.6.13 (default/linux/amd64/10.0/desktop, gcc-4.1.2, glibc-2.9_p20081201-r2, 2.6.30-gentoo-r5 x86_64)
=================================================================                                              
System uname: Linux-2.6.30-gentoo-r5-x86_64-AMD_Athlon-tm-_64_X2_Dual_Core_Processor_BE-2300-with-gentoo-1.12.11.1
Timestamp of tree: Mon, 02 Nov 2009 16:00:01 +0000                                                                
app-shells/bash:     4.0_p28                                                                                      
dev-java/java-config: 1.3.7, 2.1.9-r1                                                                             
dev-lang/python:     2.4.6, 2.5.4-r3, 2.6.2-r1                                                                    
dev-python/pycrypto: 2.0.1-r6                                                                                     
dev-util/cmake:      2.6.4                                                                                        
sys-apps/baselayout: 1.12.11.1
sys-apps/sandbox:    1.6-r2
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2
sys-devel/binutils:  2.18-r3
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6a
virtual/os-headers:  2.6.27-r2
ACCEPT_KEYWORDS="amd64"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=k8 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/config"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d"
CXXFLAGS="-march=k8 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="distlocks fixpackages nostrip parallel-fetch protect-owned sandbox sfperms strict unmerge-orphans userfetch"
GENTOO_MIRRORS="http://mirror.datapipe.net/gentoo"
LANG="en_US.utf8"
LC_ALL="en_US.utf8"
LDFLAGS="-Wl,-O1"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="X a52 aac acl acpi alsa amd64 berkdb bluetooth branding bzip2 cairo cdr cli consolekit cracklib crypt cups dbus dri dts dvd dvdr eds emboss encode evo fam firefox flac fortran gdbm gif gnome gpm gstreamer gtk hal iconv jpeg kde ldap libnotify mad mikmod mmx modules mp3 mp4 mpeg mudflap multilib ncurses nls nptl nptlonly ogg opengl openmp pam pcre pdf perl png ppds pppd python qt3support qt4 quicktime readline reflection sdl session spell spl sse sse2 ssl startup-notification svg sysfs tcpd thunar tiff truetype unicode usb vorbis x264 xml xorg xulrunner xv xvid zlib" ALSA_CARDS="intel8x0" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="evdev mouse keyboard" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" USERLAND="GNU" VIDEO_CARDS="mga vesa nvidia"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LINGUAS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

Comment 23 Andreas K. Hüttel archtester gentoo-dev 2010-03-28 16:19:33 UTC
*** Bug 311465 has been marked as a duplicate of this bug. ***
Comment 24 dan blum 2010-04-03 16:26:03 UTC
My computer used to produce error logs through the end of April. I submitted one under bug 311645. Since then, I worked on several things, sync and some other updates so now I am not getting any more error messages. I had no obvious issues; my computer from time to time locked up and would not take keyboard or mouse inputs, but that may not have gone away yet.(In reply to comment #23)
> *** Bug 311465 has been marked as a duplicate of this bug. ***
> 

Comment 25 Andreas K. Hüttel archtester gentoo-dev 2010-07-07 18:57:08 UTC
Since kde-4.4.4 is stable we can probably resolve this one.