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Bug 155140 - [fPIC] sci-mathematics/snns fails to compile on AMD64
Summary: [fPIC] sci-mathematics/snns fails to compile on AMD64
Status: RESOLVED DUPLICATE of bug 131460
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: AMD64 Linux
: High normal
Assignee: AMD64 Project
URL:
Whiteboard:
Keywords:
Depends on: 131460
Blocks:
  Show dependency tree
 
Reported: 2006-11-14 08:11 UTC by Yuri Pimenov
Modified: 2007-01-24 07:41 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---

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Description Yuri Pimenov 2006-11-14 08:11:45 UTC 
/usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/../../../../lib64/libfl.a(libyywrap.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
/usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/../../../../lib64/libfl.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
error: command 'x86_64-pc-linux-gnu-gcc' failed with exit status 1

!!! ERROR: sci-mathematics/snns-4.2-r7 failed.
Call stack:
  ebuild.sh, line 1568:   Called dyn_compile
  ebuild.sh, line 937:   Called src_compile
  snns-4.2-r7.ebuild, line 72:   Called die

!!! could not build python extension
!!! If you need support, post the topmost build error, and the call stack if relevant.


zerg ~ # emerge --info
Portage 2.1.2_rc1-r6 (default-linux/amd64/2006.1/desktop, gcc-4.1.1, glibc-2.5-r0, 2.6.18-gentoo-r1 x86_64)
=================================================================
System uname: 2.6.18-gentoo-r1 x86_64 AMD Athlon(tm) 64 Processor 3500+
Gentoo Base System version 1.12.6
Last Sync: Tue, 14 Nov 2006 13:00:01 +0000
ccache version 2.4 [enabled]
dev-java/java-config: 1.3.7, 2.0.30
dev-lang/python:     2.4.4
dev-python/pycrypto: 2.0.1-r5
dev-util/ccache:     2.4-r6
sys-apps/sandbox:    1.2.18.1
sys-devel/autoconf:  2.13, 2.60
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10
sys-devel/binutils:  2.17
sys-devel/gcc-config: 1.3.14
sys-devel/libtool:   1.5.22
virtual/os-headers:  2.6.17-r1
ACCEPT_KEYWORDS="amd64 ~amd64"
AUTOCLEAN="yes"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-mtune=k8 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config"
CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/gconf /etc/java-config/vms/ /etc/revdep-rebuild /etc/splash /etc/terminfo"
CXXFLAGS="-mtune=k8 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig candy ccache distlocks metadata-transfer sandbox sfperms strict"
GENTOO_MIRRORS="http://distfiles.gentoo.org http://ftp.linux.ee/pub/gentoo/distfiles"
LINGUAS="en ru lv"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="amd64 X alsa arts berkdb bitmap-fonts cairo cdr cli cracklib crypt dbus dlloader dri dvd dvdr eds elibc_glibc emboss encode esd fam firefox fortran gdbm gif gnome gpm gstreamer gtk gtk2 hal iconv input_devices_evdev input_devices_keyboard input_devices_mouse isdnlog jpeg kde kernel_linux libg++ linguas_en linguas_lv linguas_ru logrotate mad mikmod mono mp3 mpeg ncurses nls nptl nptlonly nsplugin ogg opengl oss pam pcre pdf perl png ppds pppd python qt3 qt4 quicktime readline reflection sdl session slang spell spl ssl tcpd truetype truetype-fonts type1-fonts udev unicode userland_GNU video_cards_ati video_cards_radeon video_cards_vesa vorbis xml xorg xv zlib"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LDFLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Pascariu Olimpiu 2007-01-24 07:15:06 UTC 
I receive the same error when trying to compile sci-mathematics/snns on AMD64

bigguy ~ # emerge --info
Portage 2.1.2-r2 (default-linux/amd64/2006.0, gcc-4.1.1, glibc-2.5-r0, 2.6.19-gentoo-r4 x86_64)
=================================================================
System uname: 2.6.19-gentoo-r4 x86_64 AMD Athlon(tm) 64 Processor 3200+
Gentoo Base System version 1.12.9
Timestamp of tree: Tue, 23 Jan 2007 17:20:01 +0000
dev-java/java-config: 1.3.7, 2.0.31-r3
dev-lang/python:     2.4.4
dev-python/pycrypto: 2.0.1-r5
sys-apps/sandbox:    1.2.18.1
sys-devel/autoconf:  2.13, 2.61
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10
sys-devel/binutils:  2.17
sys-devel/gcc-config: 1.3.14
sys-devel/libtool:   1.5.22
virtual/os-headers:  2.6.19.2-r1
ACCEPT_KEYWORDS="amd64 ~amd64"
AUTOCLEAN="yes"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=athlon64 -O2 -pipe -msse3"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config /var/bind"
CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/gconf /etc/java-config/vms/ /etc/revdep-rebuild /etc/terminfo /etc/texmf/web2c"
CXXFLAGS="-march=athlon64 -O2 -pipe -msse3"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig distlocks metadata-transfer sandbox sfperms strict"
GENTOO_MIRRORS="http://ftp.romnet.org/gentoo/"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_RSYNC_EXTRA_OPTS=""
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/portage/local/layman/xeffects /usr/portage/local/layman/sunrise"
SYNC="rsync://rsync.ro.gentoo.org/gentoo-portage"
USE="7zip X a52 aac acl acpi alsa amd64 aoss apache2 arj asf authdaemond authfile authlib berkdb bitmap-fonts bzip2 cairo cdparanoia cdr clamav cli cracklib crypt cups dbus dlloader dri dvd dvdr dvdread eds emboss encode exif ffmpeg firefox flac foomaticdb fortran gif gnome gpm gstreamer gtk gtk2 hal iconv imagemagick imlib iproute2 isdnlog java jpeg lzw lzw-tiff mad matroska mono mp3 mpeg mysql ncurses nls nptl nptlonly nsplugin ogg opengl oss pam pcre pdf perl php png pppd python qt3 qt4 quicktime readline reflection sdl session spell spl ssl svg tcpd theora threads tiff tk truetype truetype-fonts type1-fonts usb vorbis wmf xine xml xorg xpm xv xvid zip zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi null plug rate route share shm softvol" ELIBC="glibc" INPUT_DEVICES="keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" USERLAND="GNU" VIDEO_CARDS="nvidia"
Unset:  CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LDFLAGS, LINGUAS
Comment 2 Simon Stelling (RETIRED) gentoo-dev 2007-01-24 07:41:52 UTC 

*** This bug has been marked as a duplicate of bug 131460 ***