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Bug 147614 - sci-chemistry/gromacs-3.3.1 is broken by gcc 4.1.1
Summary: sci-chemistry/gromacs-3.3.1 is broken by gcc 4.1.1
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] GCC Porting (show other bugs)
Hardware: All Linux
: High normal (vote)
Assignee: Gentoo Chemistry-Related Packages
URL:
Whiteboard:
Keywords:
: 148905 (view as bug list)
Depends on: 118421
Blocks: 117482
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Reported: 2006-09-14 14:24 UTC by Joel
Modified: 2006-12-20 01:55 UTC (History)
3 users (show)

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Package list:
Runtime testing required: ---

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Description Joel 2006-09-14 14:24:52 UTC 
gromacs-3.3.1 emerge is broken by gcc 4.1.1 installation because the ebuild does not recognize gfortran as a valid compiler.

The latest ebuild in http://bugs.gentoo.org/show_bug.cgi?id=118421 works for me under amd64.  However, it would be nice if the threads USE flag were enabled again.
Comment 1 Mathias Weigt 2006-09-14 22:42:51 UTC 
(In reply to comment #0)
> gromacs-3.3.1 emerge is broken by gcc 4.1.1 installation because the ebuild
> does not recognize gfortran as a valid compiler.

Yes, this should be ok, as there seems to bee some fortran code, which gfortran cannot compile (but g77).

> The latest ebuild in http://bugs.gentoo.org/show_bug.cgi?id=118421 works for me
> under amd64.  However, it would be nice if the threads USE flag were enabled
> again.

This is not an issue of the ebuild because threads support in gromacs is broken. You should contact upstream if you really need it.
Comment 2 Jakub Moc (RETIRED) gentoo-dev 2006-09-24 04:26:53 UTC 
*** Bug 148905 has been marked as a duplicate of this bug. ***
Comment 3 Jeffrey Gardner (RETIRED) gentoo-dev 2006-12-19 20:48:34 UTC 
added gromacs-3.3.1-r1.ebuild
Comment 4 Jakub Moc (RETIRED) gentoo-dev 2006-12-20 01:54:55 UTC 
Reopen to resolve properly :)
Comment 5 Jakub Moc (RETIRED) gentoo-dev 2006-12-20 01:55:28 UTC 
FIXED.