Bug 113060 – gnome-libs-1.4.2 fails to compile due to db1/path errors like "gnome-dump.c:26:23: warning: /usr/include/db1/sys/types.h: Permission denied" and "gnome-dump.c:(.text+0x48): undefined reference to `__db185_open_4002'

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description Sandro Bonazzola (RETIRED) 2005-11-20 01:13:50 UTC]

I'll attach a full emerge log.

Reproducible: Always
Steps to Reproduce:
1. emerge gnome-libs
2.
3.

Actual Results:  
emerge fails to compile and install gnome-libs.

Expected Results:  
emerge install gnome-libs.

Portage 2.0.53_rc7 (default-linux/amd64/2005.1, gcc-3.4.4, glibc-2.3.5-r3,
2.6.14-gentoo-r1 x86_64)
=================================================================
System uname: 2.6.14-gentoo-r1 x86_64 AMD Athlon(tm) 64 Processor 3500+
Gentoo Base System version 1.12.0_pre10
ccache version 2.4 [enabled]
dev-lang/python:     2.4.2
sys-apps/sandbox:    1.2.13
sys-devel/autoconf:  2.13, 2.59-r7
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r1
sys-devel/binutils:  2.16.1
sys-devel/libtool:   1.5.20-r1
virtual/os-headers:  2.6.11-r3
ACCEPT_KEYWORDS="amd64 ~amd64"
AUTOCLEAN="yes"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS=" -march=athlon64 -O2 -pipe "
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/2/share/config /usr/kde/3.4/env
/usr/kde/3.4/share/config /usr/kde/3.4/shutdown /usr/kde/3/share/config
/usr/lib/X11/xkb /usr/share/config /var/qmail/control"
CONFIG_PROTECT_MASK="/etc/gconf /etc/splash /etc/terminfo /etc/env.d"
CXXFLAGS=" -march=athlon64 -O2 -pipe "
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig buildpkg buildsyspkg ccache collision-protect confcache cvs
distlocks elog maketest parallel-fetching sandbox sfperms strict test userpriv"
GENTOO_MIRRORS="http://gentoo.osuosl.org/
http://mirror.ovh.net/gentoo-distfiles/ ftp://ftp.heanet.ie/pub/gentoo/
http://www.die.unipd.it/pub/Linux/distributions/gentoo-sources/
ftp://ftp.unina.it/pub/linux/distributions/gentoo http://gentoo.ngi.it
http://mirror.switch.ch/ftp/mirror/gentoo/ ftp://mirror.switch.ch/mirror/gentoo/ "
LANG="it_IT.utf8"
LINGUAS="it"
PKGDIR="/usr/portage/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage"
USE="amd64 7zip X a52 aac aalib acl alsa apache2 arts audiofile avi berkdb
bitmap-fonts bzip2 cdparanoia cdr chroot cpudetection crypt cups curl directfb
dts dv dvd emboss encode erandom esd exif expat fam ffmpeg firefox flac
foomaticdb gd gdbm ggi gif gimp gimpprint glibc-omitfp glut gmp gnome gnutls
gphoto2 gpm graphviz gstreamer gtk gtk2 idn ieee1394 imagemagick imlib ipv6
ithreads jbig jpeg jpeg2k justify kde kdeenablefinal lcms ldap libcaca libwww
linuxthreads-tls lm_sensors logitech-mouse logrotate lzo lzw lzw-tiff mad
mailwrapper mbox mikmod mmap mng motif mp3 mpeg mpm-worker mysql ncurses nls
nptl nptlonly numeric nvidia odbc offensive ogg opengl pam pcre pdflib perl png
ppds python qt quicktime readline recode rtc samba scanner sdl slang smp snmp
speex spell ssl svg sysfs tcltk tcpd test tetex tga theora threads tiff timidity
truetype truetype-fonts type1-fonts udev unicode usb userlocales utf8 vda vorbis
wmf xine xinerama xml2 xmms xpm xv xvid zlib linguas_it userland_GNU
kernel_linux elibc_glibc"
Unset:  ASFLAGS, CTARGET, LC_ALL, LDFLAGS, MAKEOPTS

[Comment 1 Sandro Bonazzola (RETIRED) 2005-11-20 01:15:03 UTC]

Created attachment 73213 [details]
full emerge log

[Comment 2 John N. Laliberte (RETIRED) 2005-11-20 07:14:21 UTC]

can you attach the log as plaintext?
Thanks

[Comment 3 Sandro Bonazzola (RETIRED) 2005-11-20 07:23:47 UTC]

Created attachment 73242 [details]
full emerge log plain text

I begin to think that gzip on amd64 does weird things. It seems that my gzip
files can't be read by noone else than me... However, here is a new emerge log,
same error in the same place.

[Comment 4 John N. Laliberte (RETIRED) 2005-11-20 07:51:46 UTC]

could you attach config.log ?

Thanks

[Comment 5 Sandro Bonazzola (RETIRED) 2005-11-20 08:00:49 UTC]

Created attachment 73245 [details]
config.log

as requested.

[Comment 6 John N. Laliberte (RETIRED) 2005-11-20 08:12:47 UTC]

configure:11725:20: warning: /usr/include/db1/db.h: Permission denied

just to be sure, what do the permissions look like on:
/usr/include/db1
?

Thanks

[Comment 7 Sandro Bonazzola (RETIRED) 2005-11-21 11:41:42 UTC]

mmm now that I look at it, /usr/include/db1 has 644 permissions... maybe the
last db1 ebulid has some problems. In any case it's strange it search stdio in
/usr/include/db1.

[Comment 8 John N. Laliberte (RETIRED) 2005-12-21 16:20:36 UTC]

are you still having this problem?

[Comment 9 Sandro Bonazzola (RETIRED) 2005-12-23 12:52:52 UTC]

(In reply to comment #8)
> are you still having this problem?
> 

I've changed manually permissions to 755, I'm trying to figure out why it was 644. But I think that could be eventually another bug. This is actually resolved.