Bug 935383

Summary:	dev-python/scipy-1.13.1 fails tests: scipy/linalg/tests/test_decomp.py::TestEig::test_singular - AssertionError: Not equal to tolerance rtol=1e-13, atol=1e-13
Product:	Gentoo Linux	Reporter:	matoro <matoro_gentoo>
Component:	Current packages	Assignee:	Gentoo Science Related Packages <sci>
Status:	RESOLVED FIXED
Severity:	normal	CC:	matoro_gentoo, python
Priority:	Normal	Keywords:	PATCH, TESTFAILURE
Version:	unspecified
Hardware:	All
OS:	Linux
URL:	https://github.com/scipy/scipy/pull/20914
See Also:	https://bugs.gentoo.org/show_bug.cgi?id=933789 https://github.com/scipy/scipy/issues/20911
Whiteboard:
Package list:		Runtime testing required:	---
Attachments:	build.log and emerge --info

Description matoro archtester

2024-07-03 02:44:24 UTC

Created attachment 896826 [details]
build.log and emerge --info

Already reported and fixed upstream:
https://github.com/scipy/scipy/issues/20911
https://github.com/scipy/scipy/pull/20914

FAILED scipy/linalg/tests/test_decomp.py::TestEig::test_singular - AssertionError: 
Not equal to tolerance rtol=1e-13, atol=1e-13
 
array([[22, 34, 31, 31, 17],
       [45, 45, 42, 19, 29],
       [39, 47, 49, 26, 34],
       [27, 31, 26, 21, 15],
       [38, 44, 44, 24, 30]])
array([[13, 26, 25, 17, 24],
       [31, 46, 40, 26, 37],
       [26, 40, 19, 25, 25],
       [16, 25, 27, 14, 23],
       [24, 35, 18, 21, 22]])
Mismatched elements: 1 / 5 (20%)
Max absolute difference: 1.53003533e-13
Max relative difference: inf
 x: array([-1.044103e-14+0.j, -1.530035e-13+0.j, -9.371269e-14+0.j,
       -1.317794e-14+0.j, -9.193633e-14+0.j])
 y: array(0)
=========== 1 failed, 61408 passed, 2625 skipped, 245 xfailed, 14 xpassed, 15 warnings in 142.40s (0:02:22) ===========

Comment 1 Larry the Git Cow gentoo-dev

2024-07-05 19:04:37 UTC

The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=13d8f37a154f23e4aa1991851eabaec11143ba6e

commit 13d8f37a154f23e4aa1991851eabaec11143ba6e
Author:     Michał Górny <mgorny@gentoo.org>
AuthorDate: 2024-07-05 19:04:04 +0000
Commit:     Michał Górny <mgorny@gentoo.org>
CommitDate: 2024-07-05 19:04:04 +0000

    dev-python/scipy: Backport a test fix to 1.13.1
    
    Closes: https://bugs.gentoo.org/935383
    Signed-off-by: Michał Górny <mgorny@gentoo.org>

 dev-python/scipy/files/scipy-1.13.1-test.patch | 46 ++++++++++++++++++++++++++
 dev-python/scipy/scipy-1.13.1.ebuild           |  5 +++
 2 files changed, 51 insertions(+)