| Summary: | sci-chemistry/gromacs-2024.1 - /.../pme_gpu_internal.cpp: error: MPI_INT was not declared in this scope | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Toralf Förster <toralf> |
| Component: | Current packages | Assignee: | Alexey Shvetsov <alexxy> |
| Status: | CONFIRMED --- | ||
| Severity: | normal | CC: | sci-chemistry |
| Priority: | Normal | ||
| Version: | unspecified | ||
| Hardware: | All | ||
| OS: | Linux | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
| Attachments: |
emerge-info.txt
emerge-history.txt.xz environment etc.clang.tar.xz etc.portage.tar.xz qlist-info.txt.xz sci-chemistry:gromacs-2024.1:20240427-181746.log.xz temp.tar.xz |
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Created attachment 891863 [details]
emerge-info.txt
Created attachment 891864 [details]
emerge-history.txt.xz
Created attachment 891865 [details]
environment
Created attachment 891866 [details]
etc.clang.tar.xz
Created attachment 891867 [details]
etc.portage.tar.xz
Created attachment 891868 [details]
qlist-info.txt.xz
Created attachment 891869 [details]
sci-chemistry:gromacs-2024.1:20240427-181746.log.xz
Created attachment 891870 [details]
temp.tar.xz
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too long lines were shrinked: from /var/tmp/portage/sci-chemistry/gromacs-2024.1/work/gromacs-2024.1/src/gromacs/ewald/pme_gpu_internal.h:49, from /var/tmp/portage/sci-chemistry/gromacs-2024.1/work/gromacs-2024.1/src/gromacs/ewald/pme_gpu_internal.cpp:49: /usr/include/CL/cl_version.h:22:104: note: #pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0) 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ /var/tmp/portage/sci-chemistry/gromacs-2024.1/work/gromacs-2024.1/src/gromacs/ewald/pme_gpu_internal.cpp: In function void pme_gpu_reinit_atoms(PmeGpu*, int, const real*, const real*): /var/tmp/portage/sci-chemistry/gromacs-2024.1/work/gromacs-2024.1/src/gromacs/ewald/pme_gpu_internal.cpp:1426:89: error: MPI_INT was not declared in this scope 1426 | &pmeGpu->nAtomsAlloc, &pmeGpu->nvshmemParams->nAtomsAlloc_symmetric, 1, MPI_INT, MPI_MAX, MPI_COMM_WORLD); | ^~~~~~~ ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 23.0_hardened_systemd-20240417-170004 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-13 * clang/llvm (if any): clang version 18.1.4 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/18/bin Configuration file: /etc/clang/x86_64-pc-linux-gnu-clang.cfg /usr/lib/llvm/18 18.1.4 Python 3.11.9 Available Rust versions: [1] rust-bin-1.77.1 [2] rust-1.77.1 * The following VMs are available for generation-2: 1) Eclipse Temurin JDK 11.0.22_p7 [openjdk-bin-11] 2) Eclipse Temurin JDK 17.0.10_p7 [openjdk-bin-17] *) Eclipse Temurin JDK 21.0.2_p13 [openjdk-bin-21] 4) Eclipse Temurin JDK 8.402_p06 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-bin-8 [2] openjdk-bin-11 [3] openjdk-bin-17 [4] openjdk-bin-21 system-vm The Glorious Glasgow Haskell Compilation System, version 9.2.8 php cli (if any): go version go1.22.2 linux/amd64 HEAD of ::gentoo commit d9cfc0994d7fba71fa7a436e60936ab76ebdcff8 Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Sat Apr 27 17:19:40 2024 +0000 2024-04-27 17:19:39 UTC emerge -qpvO sci-chemistry/gromacs [ebuild N ] sci-chemistry/gromacs-2024.1 USE="custom-cflags doc fftw gmxapi gmxapi-legacy hwloc lapack offensive opencl single-precision tng -blas -build-manual -clang -clang-cuda -cuda -double-precision -mkl -mpi -openmp (-python) -test -threads" CPU_FLAGS_X86="avx avx2 sse2 sse4_1 -avx512f -fma4" PYTHON_SINGLE_TARGET="python3_11 -python3_10 -python3_12"