Summary: | sci-biology/bedtools-2.30.0 fails to compile (MUSL-SYSTEM): BamAux.h:10:17: error: int32_t does not name a type | ||
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Product: | Gentoo Linux | Reporter: | Agostino Sarubbo <ago> |
Component: | Current packages | Assignee: | Gentoo Science Biology related packages <sci-biology> |
Status: | CONFIRMED --- | ||
Severity: | normal | ||
Priority: | Normal | ||
Version: | unspecified | ||
Hardware: | All | ||
OS: | Linux | ||
Whiteboard: | |||
Package list: | Runtime testing required: | --- | |
Attachments: | build.log |
Description
Agostino Sarubbo
2023-06-07 06:54:53 UTC
Created attachment 863440 [details]
build.log
build log and emerge --info
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6659d55f12a3e8b75dbf9545cac23f37ca00bd58 commit 6659d55f12a3e8b75dbf9545cac23f37ca00bd58 Author: David Seifert <soap@gentoo.org> AuthorDate: 2024-04-25 09:37:47 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2024-04-25 09:37:47 +0000 sci-biology/bedtools: add 2.31.1 Bug: https://bugs.gentoo.org/881783 Bug: https://bugs.gentoo.org/907971 Bug: https://bugs.gentoo.org/929751 Signed-off-by: David Seifert <soap@gentoo.org> sci-biology/bedtools/Manifest | 1 + sci-biology/bedtools/bedtools-2.31.1.ebuild | 49 ++++++ .../files/bedtools-2.31.1-buildsystem.patch | 84 ++++++++++ .../bedtools/files/bedtools-2.31.1-includes.patch | 178 +++++++++++++++++++++ .../bedtools/files/bedtools-2.31.1-python.patch | 40 +++++ 5 files changed, 352 insertions(+) |