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Bug 884489

Summary: gnome-base/gnome-desktop-43-r300 - Detected file collision(s) with gtk-doc
Product: Gentoo Linux Reporter: Leonid Kopylov <leonchik1976>
Component: Current packagesAssignee: Gentoo Linux Gnome Desktop Team <gnome>
Status: RESOLVED FIXED    
Severity: normal CC: jstein, luc_pierard_de_maujouy
Priority: Normal    
Version: unspecified   
Hardware: AMD64   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---
Bug Depends on:    
Bug Blocks: 885627    

Description Leonid Kopylov 2022-12-05 16:37:01 UTC
i have gnome-base/gnome-desktop-43-r400 installed.
gnome-base/gnome-desktop-43-r300 pull as dependency and fails on "Detected file collision(s)" with USE=gtk-doc

* Messages for package gnome-base/gnome-desktop-43-r300:

 * This package will overwrite one or more files that may belong to other
 * packages (see list below).
 *
 * Detected file collision(s):
 *
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3.devhelp2
 *      /usr/share/gtk-doc/html/gnome-desktop3/right.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/up-insensitive.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/up.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/left.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/right-insensitive.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/left-insensitive.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/home.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/style.css
 *      /usr/share/gtk-doc/html/gnome-desktop3/annotation-glossary.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/background.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeBGCrossfade.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeBGSlideShow.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeDesktopThumbnailFactory.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeIdleMonitor.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeWallClock.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeXkbInfo.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-Language-Utilities.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-gnome-bg.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-gnome-pnp-ids.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-gnome-rr-config.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-gnome-rr.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/idle-monitor.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/index.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/intro.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/languages.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/randr.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/thumbnail.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/wall-clock.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/xkb-info.html
 *
 * Searching all installed packages for file collisions...
 *
 * Press Ctrl-C to Stop
 *
 * gnome-base/gnome-desktop-43-r400:4::gentoo
 *      /usr/share/gtk-doc/html/gnome-desktop3/annotation-glossary.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/background.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeBGCrossfade.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeBGSlideShow.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeDesktopThumbnailFactory.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeIdleMonitor.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeWallClock.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-GnomeXkbInfo.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-Language-Utilities.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-gnome-bg.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3-gnome-pnp-ids.html
 *      /usr/share/gtk-doc/html/gnome-desktop3/gnome-desktop3.devhelp2
 *      /usr/share/gtk-doc/html/gnome-desktop3/home.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/left-insensitive.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/left.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/right-insensitive.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/right.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/style.css
 *      /usr/share/gtk-doc/html/gnome-desktop3/up-insensitive.png
 *      /usr/share/gtk-doc/html/gnome-desktop3/up.png
 *
 * Package 'gnome-base/gnome-desktop-43-r300' NOT merged due to file
 * collisions. If necessary, refer to your elog messages for the whole
 * content of the above message.

# emerge =gnome-base/gnome-desktop-43-r300 -pvq
[ebuild  NS   ] gnome-base/gnome-desktop-43-r300 [43-r400] USE="gtk-doc introspection%* (seccomp) systemd udev -debug"


# emerge --info =gnome-base/gnome-desktop-43-r300
Portage 3.0.40 (python 3.10.8-final-0, default/linux/amd64/17.1/desktop/gnome/systemd/merged-usr, gcc-12, glibc-2.36-r6, 6.0.11-gentoo-amd64 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-6.0.11-gentoo-amd64-x86_64-12th_Gen_Intel-R-_Core-TM-_i7-12700-with-glibc2.36
KiB Mem:    32876052 total,  22866492 free
KiB Swap:    8388604 total,   8388604 free
Timestamp of repository gentoo: Sun, 04 Dec 2022 10:00:01 +0000
Head commit of repository gentoo: e71d31144780c530f96060005904503c0f23e780
sh bash 5.2_p12
ld GNU ld (Gentoo 2.39 p5) 2.39.0
ccache version 4.7.4 [enabled]
app-misc/pax-utils:        1.3.5::gentoo
app-shells/bash:           5.2_p12::gentoo
dev-java/java-config:      2.3.1::gentoo
dev-lang/perl:             5.36.0-r1::gentoo
dev-lang/python:           3.10.8_p3::gentoo, 3.11.0_p2::gentoo, 3.12.0_alpha2::gentoo
dev-lang/rust:             1.65.0::gentoo
dev-util/ccache:           4.7.4::gentoo
dev-util/cmake:            3.25.1::gentoo
dev-util/meson:            0.64.1::gentoo
sys-apps/baselayout:       2.9::gentoo
sys-apps/sandbox:          2.29::gentoo
sys-apps/systemd:          252.2::gentoo
sys-devel/autoconf:        2.13-r7::gentoo, 2.71-r5::gentoo
sys-devel/automake:        1.16.5::gentoo
sys-devel/binutils:        2.39-r4::gentoo
sys-devel/binutils-config: 5.4.1::gentoo
sys-devel/clang:           15.0.6::gentoo
sys-devel/gcc:             12.2.1_p20221008::gentoo
sys-devel/gcc-config:      2.8::gentoo
sys-devel/libtool:         2.4.7::gentoo
sys-devel/llvm:            15.0.6::gentoo
sys-devel/make:            4.4::gentoo
sys-kernel/linux-headers:  6.0::gentoo (virtual/os-headers)
sys-libs/glibc:            2.36-r6::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts:
    sync-rsync-verify-max-age: 24

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA google-chrome"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php8.1/ext-active/ /etc/php/cgi-php8.1/ext-active/ /etc/php/cli-php8.1/ext-active/ /etc/php/fpm-php8.1/ext-active/ /etc/php/phpdbg-php8.1/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg-live ccache config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict strict-keepdir unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe -fomit-frame-pointer"
GENTOO_MIRRORS="https://mirror.isoc.org.il/pub/gentoo/"
LANG="en_US.utf8"
LC_ALL="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LEX="flex"
MAKEOPTS="-j10"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="X a52 aac aalib accessibility acl acpi activities alsa amd64 ao appindicator archive aspell audit berkdb bidi bluetooth bluray boost branding brotli bzip2 cairo cdda cddb cdr cgi cli colord contrib cron crypt cryptsetup cups curl dbi dbus designer device-mapper djvu doc dri dts dvb dvd dvdr eds emacs enchant encode evdev evo examples executable exif expat experimental extra extras fam fbcon ffmpeg fftw firebird flac fluidsynth fontconfig fortran freetds ftp fuse games gcrypt gd gdbm gdk-pixbuf geolocation gif git glib glusterfs gme gmp gnome gnome-keyring gnome-online-accounts gnuplot gnutls go gpg gphoto2 gpm graphite graphviz gsm gssapi gstreamer gtk gtk-doc gtk3 gui guile harfbuzz heif highlight hscolour http http2 ibus iconv icu idn imagemagick imap imlib introspection iodbc ipv6 jack java javascript jbig jemalloc jpeg jpeg2k jpegxl json kde kerberos ladspa lame latex lcms ldap libass libcaca libevent libglvnd libnotify libsamplerate libsecret libtirpc libxml2 lmdb lua lv2 lvm lz4 lzma lzo mad magic man mbedtls memcached midi mng modplug mono mp3 mp4 mpeg mpi mssql mtp multilib multimedia musepack mysql nas nautilus ncurses netlink nettle network networkmanager nfs nls nptl nss ntlm odbc offensive ogg openal openexr opengl openmp openssl opus pam pango pcap pcre pdf perl phonon pkcs11 plasma plugins png policykit portaudio postgres postscript ppds pulseaudio python qdbm qml qrcode qt5 raw rdma readline redis samba sasl screencast sctp sdl seccomp sftp share skey sndfile sndio snmp sound source sox speech speex spell sql sqlite ssh ssl startup-notification svg symlink syslog sysprof systemd taglib tcl telemetry test-rust theora threads tiff tk tools tracker tremor truetype twolame udev udisks unicode unwind upnp upower usb utils uuid v4l vala vcd vim-syntax vnc vorbis vpx wavpack wayland webengine webkit webp websockets widgets wmf wxwidgets x264 x265 xattr xcb xface xft xinerama xml xmp xpm xscreensaver xv xvid zeroconf zfs zip zlib zstd" ABI_X86="64 32" ADA_TARGET="gnat_2021" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt rdrand sha sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="evdev libinput" KERNEL="linux" L10N="en en-US he ru" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="nlpsolver scripting-beanshell scripting-javascript wiki-publisher" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-4 php8-0" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_10" PYTHON_TARGETS="python3_10" RUBY_TARGETS="ruby27 ruby30 ruby31" USERLAND="GNU" VIDEO_CARDS="fbdev" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
Comment 1 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-12-18 23:56:01 UTC
*** Bug 887061 has been marked as a duplicate of this bug. ***
Comment 2 CaptainBlood 2022-12-19 09:44:37 UTC
Letting USE=gtk-doc activated on only one of the two slotted package such as 
gnome-base/gnome-desktop:3 -gtk-doc
gnome-base/gnome-desktop:4 gtk-doc
OR
gnome-base/gnome-desktop:3 gtk-doc
gnome-base/gnome-desktop:4 -gtk-doc

in /etc/portage/package.use

should help to workaround this issue.
Comment 3 Larry the Git Cow gentoo-dev 2022-12-19 16:15:31 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=716685df144dd4dddcdfb9f26448d5bb5292579e

commit 716685df144dd4dddcdfb9f26448d5bb5292579e
Author:     Matt Turner <mattst88@gentoo.org>
AuthorDate: 2022-12-19 16:06:19 +0000
Commit:     Andreas K. Hüttel <dilfridge@gentoo.org>
CommitDate: 2022-12-19 16:15:20 +0000

    gnome-base/gnome-desktop: Remove IUSE=gtk-doc from SLOT="3"
    
    Closes: https://bugs.gentoo.org/884489
    Signed-off-by: Matt Turner <mattst88@gentoo.org>
    Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>

 .../{gnome-desktop-43-r300.ebuild => gnome-desktop-43-r301.ebuild}   | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)