Bug 876873

Summary:	sys-kernel/genkernel-4.0.10 with >=sys-libs/glibc-2.34: "System binary '/usr/lib64/libnss_dns.so' could not be found"
Product:	Gentoo Hosted Projects	Reporter:	Marco.Froehlich
Component:	genkernel	Assignee:	Gentoo Genkernel Maintainers <genkernel>
Status:	RESOLVED OBSOLETE
Severity:	major	CC:	bkohler
Priority:	Normal
Version:	unspecified
Hardware:	AMD64
OS:	Linux
See Also:	https://bugs.gentoo.org/show_bug.cgi?id=823716 https://bugs.gentoo.org/show_bug.cgi?id=842456
Whiteboard:
Package list:		Runtime testing required:	---
Bug Depends on:
Bug Blocks:	803482
Attachments:	genkernel.log

Description Marco.Froehlich 2022-10-12 17:27:53 UTC

gentoo-sources kernel 5.15.26 (stable) was the last one that compiled fine using genkernel 4.0.10. Unfortunately later stable releases of kernel 5.15 began showing the following error:

" ERROR: create_initramfs(): append_data(): append_busybox(): copy_system_binaries(): System binary '/usr/lib64/libnss_dns.so' could not be found! "

I would therefore kindly ask for your help. Thank you very much indeed.

Reproducible: Always




Portage 3.0.38.1 (python 3.10.6-final-0, default/linux/amd64/17.1/desktop/plasma, gcc-11.3.0, glibc-2.35-r8, 5.15.26-gentoo-x86_64 x86_64)
=================================================================
System uname: Linux-5.15.26-gentoo-x86_64-x86_64-Intel-R-_Core-TM-_i3-7100U_CPU_@_2.40GHz-with-glibc2.35
KiB Mem:    32744080 total,  19117484 free
KiB Swap:   50330620 total,  50330620 free
Timestamp of repository gentoo: Wed, 12 Oct 2022 10:15:01 +0000
Head commit of repository gentoo: df69f4085b1c9f5ff8a639331ca0bda62781da41
Head commit of repository tlp: 4ba9fce0927a4bc87a4df54eb352a163a439810e

sh bash 5.1_p16-r1
ld GNU ld (Gentoo 2.38 p4) 2.38
app-misc/pax-utils:        1.3.5::gentoo
app-shells/bash:           5.1_p16-r1::gentoo
dev-java/java-config:      2.3.1::gentoo
dev-lang/perl:             5.34.1-r3::gentoo
dev-lang/python:           3.10.6_p4::gentoo
dev-lang/rust:             1.62.1::gentoo
dev-util/cmake:            3.23.3::gentoo
dev-util/meson:            0.62.2::gentoo
sys-apps/baselayout:       2.8::gentoo
sys-apps/openrc:           0.45.2-r1::gentoo
sys-apps/sandbox:          2.29::gentoo
sys-devel/autoconf:        2.13-r2::gentoo, 2.71-r1::gentoo
sys-devel/automake:        1.16.5::gentoo
sys-devel/binutils:        2.38-r2::gentoo
sys-devel/binutils-config: 5.4.1::gentoo
sys-devel/clang:           13.0.1::gentoo, 14.0.6-r1::gentoo
sys-devel/gcc:             10.4.0::gentoo, 11.3.0::gentoo
sys-devel/gcc-config:      2.5-r1::gentoo
sys-devel/libtool:         2.4.7::gentoo
sys-devel/lld:             13.0.1::gentoo
sys-devel/llvm:            13.0.1::gentoo, 14.0.6-r2::gentoo
sys-devel/make:            4.3::gentoo
sys-kernel/linux-headers:  5.15-r3::gentoo (virtual/os-headers)
sys-libs/glibc:            2.35-r8::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: (link omitted)
    priority: -1000
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts: 
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-jobs: 1

tlp
    location: /var/db/repos/tlp
    sync-type: git
    sync-uri: (link omitted)
    masters: gentoo

x-portage
    location: /usr/local/portage
    masters: gentoo
    priority: 0

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="@FREE"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -mtune=native -O2 -pipe -fomit-frame-pointer"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /usr/bin/startx"
CXXFLAGS="-march=native -mtune=native -O2 -pipe -fomit-frame-pointer"
DISTDIR="/var/cache/distfiles"
EMERGE_DEFAULT_OPTS="--jobs=4 --keep-going --with-bdeps=y --ask-enter-invalid --quiet-build=y --quiet-fail=y"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-march=native -mtune=native -O2 -pipe -fomit-frame-pointer"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync metadata-transfer multilib-strict network-sandbox news parallel-fetch parallel-install pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -mtune=native -O2 -pipe -fomit-frame-pointer"
GENTOO_MIRRORS= (links omitted)
LANG="de_DE.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="de-DE de de-1901 en en-GB en-US es-AR es-LA es es-ES sa sa-IN"
MAKEOPTS="-j4"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="X a52 aac acl acpi activities alsa amd64 asm bluetooth bluray branding bs2b bzip2 cairo cdda cddb cdr cli crypt cups dav1d dbus declarative dell dri dri3 dts dv dvb dvd dvdr elogind encode exif faac faad fdk flac fortran gdbm gif gpm gtk gui iconv icu infinality ipv6 jpeg kde kwallet ladspa lcms libass libglvnd libnotify libtirpc lm-sensors lto lv2 mad metalink mng mp3 mp4 mpeg mtp multilib ncurses networkmanager nls nptl offload ogg opengl openh264 openmp opus pam pango pcre pdf pgo plasma png policykit ppds qml qt5 readline rtmp samba sdl seccomp semantic-desktop spell split-usr ssl startup-notification svg theora tiff truetype udev udisks unicode upower usb vaapi vdpau verify-sig vorbis vulkan widgets wxwidgets x264 x265 xattr xcb xml xv xvid zeroconf zink zlib" ABI_X86="64" ADA_TARGET="gnat_2020" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt rdrand sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="libinput" KERNEL="linux" L10N="de-DE de de-1901 en en-GB en-US es-AR es-LA es es-ES sa sa-IN" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-4 php8-0" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_10" PYTHON_TARGETS="python3_10" RUBY_TARGETS="ruby27" USERLAND="GNU" VIDEO_CARDS="intel i965 iris" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LEX, LFLAGS, LIBTOOL, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS

Comment 1 Sam James archtester

2022-10-12 17:30:21 UTC

I really suggest using 4.2.x if you can.

Anyway, the patches for 4.2.x were:
- https://gitweb.gentoo.org/proj/genkernel.git/commit/?id=6473e0a96a03598a9e22904d1fe011913efaac5a
- https://gitweb.gentoo.org/proj/genkernel.git/commit/?id=ab723c54aa0fef50384dbbb936614c7430f5413b
- https://gitweb.gentoo.org/proj/genkernel.git/commit/?id=fb2a687bba457e5408bc3bd979568c9a18c51be5

Comment 2 Marco.Froehlich 2022-10-12 17:34:10 UTC

Created attachment 823717 [details]
genkernel.log