Bug 836859

Summary:	sci-chemistry/mdtraj-1.9.7 fails tests on MUSL
Product:	Gentoo Linux	Reporter:	Agostino Sarubbo <ago>
Component:	Current packages	Assignee:	Gentoo Science Related Packages <sci>
Status:	RESOLVED OBSOLETE
Severity:	normal	CC:	treecleaner
Priority:	Normal	Keywords:	PMASKED
Version:	unspecified
Hardware:	All
OS:	Linux
Whiteboard:
Package list:		Runtime testing required:	---
Attachments:	build.log

Description Agostino Sarubbo gentoo-dev

2022-04-05 20:15:27 UTC

https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/

Issue: sci-chemistry/mdtraj-1.9.7 fails tests on MUSL.
Discovered on: amd64 (internal ref: tinderbox_musl)

NOTE:
This machine uses MUSL libc

Comment 1 Agostino Sarubbo gentoo-dev

2022-04-05 20:15:31 UTC

Created attachment 768920 [details]
build.log

build log and emerge --info

Comment 2 Agostino Sarubbo gentoo-dev

2022-04-05 20:15:32 UTC

Error(s) that match a know pattern:


",
14481 |         fprintf(stderr, "TNG library: Could not find particle data block with id %"PRId64". %s: %d
15336 |         fprintf(stderr, "TNG library: Cannot find frame nr %"PRId64". %s: %d
E   ModuleNotFoundError: No module named 'fastjsonschema'