| Summary: | sci-biology/kallisto-0.46.2 - /.../Bootstrap.h: error: uint has not been declared | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Toralf Förster <toralf> |
| Component: | Current packages | Assignee: | Gentoo musl team <musl> |
| Status: | CONFIRMED --- | ||
| Severity: | normal | CC: | sci-biology |
| Priority: | Normal | ||
| Version: | unspecified | ||
| Hardware: | All | ||
| OS: | Linux | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
| Attachments: |
emerge-info.txt
emerge-history.txt environment etc.portage.tar.bz2 logs.tar.bz2 sci-biology:kallisto-0.46.2:20211226-211928.log temp.tar.bz2 |
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Created attachment 760226 [details]
emerge-info.txt
Created attachment 760227 [details]
emerge-history.txt
Created attachment 760228 [details]
environment
Created attachment 760229 [details]
etc.portage.tar.bz2
Created attachment 760230 [details]
logs.tar.bz2
Created attachment 760231 [details]
sci-biology:kallisto-0.46.2:20211226-211928.log
Created attachment 760232 [details]
temp.tar.bz2
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too long lines were shrinked: [15/21] /usr/bin/x86_64-gentoo-linux-musl-g++ -I/var/tmp/portage/sci-biology/kallisto-0.46.2/work/kallisto-0.46.2/src -pipe -march=native -fno-diagnostics-color -O2 -std=c++11 -MD -MT src/CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o -MF src/CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o.d -o src/CMa FAILED: src/CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o /usr/bin/x86_64-gentoo-linux-musl-g++ -I/var/tmp/portage/sci-biology/kallisto-0.46.2/work/kallisto-0.46.2/src -pipe -march=native -fno-diagnostics-color -O2 -std=c++11 -MD -MT src/CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o -MF src/CMakeFiles/kallisto_core.dir/Bootstrap.cpp.o.d -o src/CMakeFiles/ In file included from /var/tmp/portage/sci-biology/kallisto-0.46.2/work/kallisto-0.46.2/src/Bootstrap.cpp:1: /var/tmp/portage/sci-biology/kallisto-0.46.2/work/kallisto-0.46.2/src/Bootstrap.h:57:106: error: 'uint' has not been declared 57 | const std::vector<int>& fld, const std::vector<int>& preBias, const std::vector<double>& postBias, uint compression, size_t index_version, | ^~~~ ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.0_musl_hardened-j4-20211222-090216 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-gentoo-linux-musl-11.2.1 * clang version 13.0.0 Target: x86_64-gentoo-linux-musl Thread model: posix InstalledDir: /usr/lib/llvm/13/bin /usr/lib/llvm/13 13.0.0 Python 3.9.9 Available Ruby profiles: [1] ruby26 (with Rubygems) [2] ruby27 (with Rubygems) [3] ruby30 (with Rubygems) * Available Rust versions: [1] rust-1.57.0 * php cli: HEAD of ::gentoo commit 37c76a779e7867c4044bc8e2db428a29f173a46a Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Sun Dec 26 20:07:29 2021 +0000 2021-12-26 20:07:27 UTC emerge -qpvO sci-biology/kallisto [ebuild N ] sci-biology/kallisto-0.46.2 USE="-hdf5 -test"