Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!

Bug 829795

Summary: sci-libs/netcdf-cxx-4.3.1 - ncAtt.cpp:(.text+<snip>): undefined reference to nc_inq_attlen
Product: Gentoo Linux Reporter: Toralf Förster <toralf>
Component: Current packagesAssignee: Gentoo Science Related Packages <sci>
Status: CONFIRMED ---    
Severity: normal    
Priority: Normal    
Version: unspecified   
Hardware: All   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---
Attachments: emerge-info.txt
emerge-history.txt
environment
etc.portage.tar.bz2
logs.tar.bz2
sci-libs:netcdf-cxx-4.3.1:20211221-205859.log
temp.tar.bz2

Description Toralf Förster gentoo-dev 2021-12-22 07:58:05 UTC
too long lines were shrinked:

rdlibtool: link: ln -s libnetcdf_c++4.so.def.linux .libs/libnetcdf_c++4.so.def.host
rdlibtool: link: ln -s /dev/null .libs/libnetcdf_c++4.a.disabled
rdlibtool: link: x86_64-pc-linux-gnu-g++ .libs/ncAtt.o .libs/ncCheck.o .libs/ncCompoundType.o .libs/ncDim.o .libs/ncEnumType.o .libs/ncException.o .libs/ncFile.o .libs/ncGroup.o .libs/ncGroupAtt.o .libs/ncOpaqueType.o .libs/ncType.o .libs/ncVar.o .libs/ncVarAtt.o .libs/ncVlenType.o .libs/ncByte.o .l
/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.1/../../../../x86_64-pc-linux-gnu/bin/ld: .libs/ncAtt.o: in function `netCDF::NcAtt::getAttLength() const':
ncAtt.cpp:(.text+0x5d2): undefined reference to `nc_inq_attlen'
/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.1/../../../../x86_64-pc-linux-gnu/bin/ld: .libs/ncAtt.o: in function `netCDF::NcAtt::getValues(void*) const':
ncAtt.cpp:(.text+0x622): undefined reference to `nc_get_att'

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1_hardened-j4-20211220-180012

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-11.2.1 *
clang version 13.0.0
Target: x86_64-pc-linux-gnu
Thread model: posix
InstalledDir: /usr/lib/llvm/13/bin
/usr/lib/llvm/13
13.0.0
Python 3.9.9
Available Ruby profiles:
  [1]   ruby26 (with Rubygems)
  [2]   ruby27 (with Rubygems)
  [3]   ruby30 (with Rubygems) *
The following VMs are available for generation-2:
*)	AdoptOpenJDK JRE 8.312_p07 [openjdk-jre-bin-8]
Available Java Virtual Machines:
  [1]   openjdk-jre-bin-8  system-vm

The Glorious Glasgow Haskell Compilation System, version 8.10.4
php cli:

  HEAD of ::gentoo
commit a8bd70e8d96a68ebcad34b1cb4106ad972496e9e
Author: Repository mirror & CI <repomirrorci@gentoo.org>
Date:   Tue Dec 21 20:21:37 2021 +0000

    2021-12-21 20:21:36 UTC

emerge -qpvO sci-libs/netcdf-cxx
[ebuild  N    ] sci-libs/netcdf-cxx-4.3.1  USE="-examples"
Comment 1 Toralf Förster gentoo-dev 2021-12-22 07:58:06 UTC
Created attachment 760002 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2021-12-22 07:58:07 UTC
Created attachment 760003 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2021-12-22 07:58:08 UTC
Created attachment 760004 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2021-12-22 07:58:09 UTC
Created attachment 760005 [details]
etc.portage.tar.bz2
Comment 5 Toralf Förster gentoo-dev 2021-12-22 07:58:10 UTC
Created attachment 760006 [details]
logs.tar.bz2
Comment 6 Toralf Förster gentoo-dev 2021-12-22 07:58:12 UTC
Created attachment 760007 [details]
sci-libs:netcdf-cxx-4.3.1:20211221-205859.log
Comment 7 Toralf Förster gentoo-dev 2021-12-22 07:58:13 UTC
Created attachment 760008 [details]
temp.tar.bz2