Bug 827042

Summary:	sci-libs/netcdf-4.7.4: nc_test fails when optimization level is -O2
Product:	Gentoo Linux	Reporter:	Alex Fan <alex.fan.q>
Component:	Current packages	Assignee:	Gentoo Science Related Packages <sci>
Status:	CONFIRMED ---
Severity:	normal	CC:	jstein, sam
Priority:	Normal	Keywords:	TESTFAILURE
Version:	unspecified
Hardware:	riscv
OS:	Linux
URL:	https://github.com/Unidata/netcdf-c/issues/1983
See Also:	https://github.com/Unidata/netcdf-c/pull/2050
Whiteboard:
Package list:		Runtime testing required:	---
Bug Depends on:
Bug Blocks:	807721
Attachments:	emerge --info LastTest.log build log

Description Alex Fan archtester

2021-11-24 07:52:42 UTC

happens on Sifive Unmatched (riscv64 lp64d). This seems only due to strict aliasing in gcc11. Aarch64 and ppc64le also have report of this issue from other distros, but I was not able to test them on Gentoo.

Appending -fno-strict-aliasing can fix the problem.

...
*** testing nc_get_var_uchar ... 
	FAILURE at line 1485 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1485 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1485 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1485 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1485 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1485 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1485 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1485 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	### 20 FAILURES TESTING nc_get_var_uchar! ###
*** testing nc_get_var_schar ... 
	FAILURE at line 1612 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: value read not that expected
	FAILURE at line 1599 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1599 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1599 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1599 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1599 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1599 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
	FAILURE at line 1599 of /var/tmp/portage/sci-libs/netcdf-4.7.4/work/netcdf-c-4.7.4/nc_test/test_get.c: expecting NC_ERANGE but got NC_NOERR
...

Comment 1 Alex Fan archtester

2021-11-24 07:53:07 UTC

Created attachment 755798 [details]
emerge --info

Comment 2 Alex Fan archtester

2021-11-24 07:53:33 UTC

Created attachment 755802 [details]
LastTest.log

Comment 3 Alex Fan archtester

2021-11-24 07:53:51 UTC

Created attachment 755806 [details]
build log

Comment 4 Sam James archtester

2021-11-25 00:30:32 UTC

Let's build it without strict aliasing for now.

Comment 5 Sam James archtester

2021-11-25 00:33:25 UTC

(In reply to Sam James from comment #4)
> Let's build it without strict aliasing for now.

From a63978b50b3fd36bf8198a9823cbe1f1a9e467b6 Mon Sep 17 00:00:00 2001
From: Sam James <sam@gentoo.org>
Date: Thu, 25 Nov 2021 00:31:31 +0000
Subject: [PATCH] sci-libs/netcdf: disable strict aliasing for now

Causes test failures.

Bug: https://bugs.gentoo.org/827042
Signed-off-by: Sam James <sam@gentoo.org>
---
 sci-libs/netcdf/netcdf-4.7.4.ebuild | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)