| Summary: | sci-chemistry/autodock_vina-1.1.2 - /.../precision.hpp: error: redefinition of template<class T> T boost::math::tools::detail::log | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Toralf Förster <toralf> |
| Component: | Current packages | Assignee: | Gentoo Chemistry-Related Packages <sci-chemistry> |
| Status: | RESOLVED FIXED | ||
| Severity: | normal | CC: | ionen |
| Priority: | Normal | ||
| Version: | unspecified | ||
| Hardware: | All | ||
| OS: | Linux | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
| Bug Depends on: | |||
| Bug Blocks: | 763201 | ||
| Attachments: |
emerge-info.txt
emerge-history.txt environment etc.portage.tar.bz2 sci-chemistry:autodock_vina-1.1.2:20210512-153207.log |
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Created attachment 707619 [details]
emerge-info.txt
Created attachment 707622 [details]
emerge-history.txt
Created attachment 707625 [details]
environment
Created attachment 707628 [details]
etc.portage.tar.bz2
Created attachment 707631 [details]
sci-chemistry:autodock_vina-1.1.2:20210512-153207.log
Looks like injecting -std=c++11 is all it needs. The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=94ad7eb2a2a84490626fe423556e8c15bb93a8b6 commit 94ad7eb2a2a84490626fe423556e8c15bb93a8b6 Author: Andreas Sturmlechner <asturm@gentoo.org> AuthorDate: 2021-05-16 17:34:33 +0000 Commit: Andreas Sturmlechner <asturm@gentoo.org> CommitDate: 2021-05-16 17:34:50 +0000 sci-chemistry/autodock_vina: Fix build w/ boost-1.69 Closes: https://bugs.gentoo.org/789702 Package-Manager: Portage-3.0.18, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> sci-chemistry/autodock_vina/autodock_vina-1.1.2.ebuild | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) |
| ^ /usr/include/boost/math/tools/precision.hpp:102:31: error: redefinition of ‘template<class T> T boost::math::tools::detail::log_max_value(int)’ 102 | inline BOOST_MATH_CONSTEXPR T log_max_value(const std::integral_constant<int, 1024>& BOOST_MATH_APPEND_EXPLICIT_TEMPLATE_TYPE(T)) BOOST_MATH_NOEXCEPT(T) | ^~~~~~~~~~~~~ In file included from /usr/include/boost/math/special_functions/sinc.hpp:19, from /usr/include/boost/math/quaternion.hpp:26, ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_desktop_plasma-j2-20210510-191355 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-9.3.1 [2] x86_64-pc-linux-gnu-11.1.0 * clang version 12.0.0 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/12/bin /usr/lib/llvm/12 12.0.0 Python 3.8.10 Available Ruby profiles: [1] ruby26 (with Rubygems) [2] ruby30 (with Rubygems) * Available Rust versions: [1] rust-bin-1.52.1 [2] rust-1.52.1 * The following VMs are available for generation-2: *) AdoptOpenJDK 8.292_p10 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-bin-8 system-vm The Glorious Glasgow Haskell Compilation System, version 8.10.4 [1] php7.3 [2] php7.4 [3] php8.0 * timestamp(s) of HEAD at this tinderbox image: /var/db/repos/gentoo Wed May 12 15:05:28 UTC 2021 emerge -qpvO sci-chemistry/autodock_vina [ebuild N ] sci-chemistry/autodock_vina-1.1.2 USE="-debug"