Bug 755788 – sci-biology/trf-4.04-r1 : file collision with sci-biology/trf-bin-4.09

• Product: Gentoo Linux
• Status: CONFIRMED ---

[Description Toralf Förster 2020-11-20 15:56:12 UTC]

 * Detected file collision(s):
 * 
 * 	/opt/bin/trf
 * 
 * Searching all installed packages for file collisions...
 * 
 * Press Ctrl-C to Stop
 * 
 * sci-biology/trf-bin-4.09:0::science
 * 	/opt/bin/trf
 * 
 * Package 'sci-biology/trf-4.04-r1' NOT merged due to file collisions.

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1_no-multilib-libressl_science-20201116-220441

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-10.2.0 *
/usr/lib/llvm/11
11.0.0
Available Python interpreters, in order of preference:
  [1]   python3.7
  [2]   python3.9 (fallback)
  [3]   python3.8 (fallback)
  [4]   python2.7 (fallback)
The following VMs are available for generation-2:
*)	AdoptOpenJDK 8.272_p10 [openjdk-bin-8]
Available Java Virtual Machines:
  [1]   openjdk-bin-8  system-vm

The Glorious Glasgow Haskell Compilation System, version 8.8.4

  timestamp(s) of HEAD at this tinderbox image:
/var/db/repos/gentoo	Fri Nov 20 02:35:36 AM UTC 2020
/var/db/repos/libressl	Sat Nov  7 03:06:11 PM UTC 2020

emerge -qpvO sci-biology/trf
[ebuild  N    ] sci-biology/trf-4.04-r1

[Comment 1 Toralf Förster 2020-11-20 15:56:13 UTC]

Created attachment 673720 [details]
emerge-info.txt

[Comment 2 Toralf Förster 2020-11-20 15:56:14 UTC]

Created attachment 673723 [details]
emerge-history.txt

[Comment 3 Toralf Förster 2020-11-20 15:56:16 UTC]

Created attachment 673726 [details]
etc.portage.tbz2

[Comment 4 Toralf Förster 2020-11-20 15:56:17 UTC]

Created attachment 673729 [details]
logs.tbz2

[Comment 5 Toralf Förster 2020-11-20 15:56:18 UTC]

Created attachment 673732 [details]
sci-biology:trf-4.04-r1:20201120-032127.log