Bug 755416 – dev-python/sphinx-gallery-0.8.1 fails tests

• Product: Gentoo Linux
• Status: RESOLVED OBSOLETE

[Description Thomas Deutschmann (RETIRED) 2020-11-18 23:38:55 UTC]

Created attachment 672679 [details]
build.log

> =============================================== short test summary info ================================================
> SKIPPED [1] sphinx_gallery/tests/test_scrapers.py:71: Mayavi not installed
> ERROR sphinx_gallery/tests/test_full.py::test_timings - sphinx.errors.ExtensionError: Here is a summary of the proble...
> ERROR sphinx_gallery/tests/test_full.py::test_optipng - sphinx.errors.ExtensionError: Here is a summary of the proble...
> ERROR sphinx_gallery/tests/test_full.py::test_junit - sphinx.errors.ExtensionError: Here is a summary of the problems...
> ERROR sphinx_gallery/tests/test_full.py::test_thumbnail_path - sphinx.errors.ExtensionError: Here is a summary of the...
> ERROR sphinx_gallery/tests/test_full.py::test_command_line_args_img - sphinx.errors.ExtensionError: Here is a summary...
> ERROR sphinx_gallery/tests/test_full.py::test_image_formats - sphinx.errors.ExtensionError: Here is a summary of the ...
> ERROR sphinx_gallery/tests/test_full.py::test_backreferences - sphinx.errors.ExtensionError: Here is a summary of the...
> ERROR sphinx_gallery/tests/test_full.py::test_backreferences_examples[sphinx_gallery.backreferences.identify_names.examples-plot_numpy_matplotlib]
> ERROR sphinx_gallery/tests/test_full.py::test_backreferences_examples[sphinx_gallery.sorting.ExplicitOrder.examples-plot_second_future_imports]
> ERROR sphinx_gallery/tests/test_full.py::test_logging_std_nested - sphinx.errors.ExtensionError: Here is a summary of...
> ERROR sphinx_gallery/tests/test_full.py::test_rebuild - sphinx.errors.ExtensionError: Here is a summary of the proble...
> ERROR sphinx_gallery/tests/test_full.py::test_error_messages[future/plot_future_imports_broken-.*RuntimeError.*Forcing this example to fail on Python 3.*]
> ERROR sphinx_gallery/tests/test_full.py::test_error_messages[plot_scraper_broken-.*ValueError.*zero-size array to reduction.*]
> ERROR sphinx_gallery/tests/test_full.py::test_alt_text_image - sphinx.errors.ExtensionError: Here is a summary of the...
> ERROR sphinx_gallery/tests/test_full.py::test_alt_text_thumbnail - sphinx.errors.ExtensionError: Here is a summary of...
> ERROR sphinx_gallery/tests/test_full.py::test_backreference_labels - sphinx.errors.ExtensionError: Here is a summary ...
> ERROR sphinx_gallery/tests/test_full.py::test_minigallery_directive - sphinx.errors.ExtensionError: Here is a summary...
> ERROR sphinx_gallery/tests/test_full.py::test_matplotlib_warning_filter - sphinx.errors.ExtensionError: Here is a sum...
> ERROR sphinx_gallery/tests/test_full.py::test_jupyter_notebook_pandoc - sphinx.errors.ExtensionError: Here is a summa...
> ERROR sphinx_gallery/tests/test_full.py::test_md5_hash - sphinx.errors.ExtensionError: Here is a summary of the probl...
> ERROR sphinx_gallery/tests/test_full.py::test_binder_logo_exists - sphinx.errors.ExtensionError: Here is a summary of...
> ====================================== 140 passed, 1 skipped, 21 errors in 13.24s ======================================
>  * ERROR: dev-python/sphinx-gallery-0.8.1::gentoo failed (test phase):
>  *   Tests fail with python3.7

Portage 3.0.9 (python 3.7.9-final-0, default/linux/x86/17.0, gcc-9.3.0, glibc-2.32-r2, 5.4.72-gentoo-x86 i686)
=================================================================
System uname: Linux-5.4.72-gentoo-x86-i686-with-gentoo-2.7
KiB Mem:     3106076 total,   2022408 free
KiB Swap:    8875836 total,   8863104 free
Timestamp of repository gentoo: Wed, 18 Nov 2020 21:05:35 +0000
Head commit of repository gentoo: d10e837b20fddf385094624a15ac2e75bad1c7cb

sh bash 5.0_p18
ld GNU ld (Gentoo 2.34 p6) 2.34.0
app-shells/bash:          5.0_p18::gentoo
dev-lang/perl:            5.30.3::gentoo
dev-lang/python:          3.6.12::gentoo, 3.7.9::gentoo, 3.8.6::gentoo, 3.9.0::gentoo
dev-util/cmake:           3.17.4-r1::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.7::gentoo
sys-apps/openrc:          0.42.1::gentoo
sys-apps/sandbox:         2.20::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r5::gentoo
sys-devel/automake:       1.16.1-r1::gentoo
sys-devel/binutils:       2.34-r2::gentoo
sys-devel/gcc:            9.3.0-r1::gentoo
sys-devel/gcc-config:     2.3.2-r1::gentoo
sys-devel/libtool:        2.4.6-r6::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 5.4-r1::gentoo (virtual/os-headers)
sys-libs/glibc:           2.32-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/repo/sync/gentoo.git
    priority: -1000

ABI="x86"
ABI_X86="32"
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="*"
ACCEPT_PROPERTIES="*"
ACCEPT_RESTRICT="*"
ADA_TARGET="gnat_2018"
ARCH="x86"
BINPKG_COMPRESS="bzip2"
BROOT=""
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare"
CHOST="i686-pc-linux-gnu"
CHOST_x86="i686-pc-linux-gnu"
COLLISION_IGNORE="/lib/modules/*"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CPU_FLAGS_X86="mmx mmxext sse sse2"
CXXFLAGS="-O2 -pipe -march=pentium4m -mtune=pentium4m -Wno-error=jump-misses-init -Wno-error=sign-compare"
DEFAULT_ABI="x86"
EDITOR="/usr/bin/mcedit"
ELIBC="glibc"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
EPREFIX=""
EROOT="/"
ESYSROOT="/"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg cgroup config-protect-if-modified distlocks downgrade-backup ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -march=i686 -pipe"
GCC_SPECS=""
GRUB_PLATFORMS="efi-32 pc"
GSETTINGS_BACKEND="dconf"
HOME="/root"
INFOPATH="/usr/share/gcc-data/i686-pc-linux-gnu/9.3.0/info:/usr/share/binutils-data/i686-pc-linux-gnu/2.34/info:/usr/share/info"
INPUT_DEVICES="libinput"
IUSE_IMPLICIT="abi_x86_32 prefix prefix-guest prefix-stack"
KERNEL="linux"
L10N="en en-US de de-DE"
LANG="en_US.UTF-8"
LC_ALL="en_US.UTF-8"
LC_MESSAGES="C"
LC_PAPER="de_DE.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LIBDIR_x86="lib"
LINGUAS="en de"
LOGNAME="root"
LUA_SINGLE_TARGET="lua5-1"
LUA_TARGETS="lua5-1"
MAIL="/var/mail/root"
MAKEOPTS="--jobs 5 --load-average 7.95"
MANPAGER="manpager"
MOTD_SHOWN="pam"
MULTILIB_ABIS="x86"
NOCOLOR="true"
OFFICE_IMPLEMENTATION="libreoffice"
OPENCL_PROFILE="ocl-icd"
OPENGL_PROFILE="xorg-x11"
PAGER="/usr/bin/less"
PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/lib/llvm/11/bin:/usr/lib/llvm/10/bin"
PHP_TARGETS="php7-2 php7-3"
POSTGRES_TARGETS="postgres10 postgres11"
PWD="/root"
PYTHONDONTWRITEBYTECODE="1"
PYTHON_SINGLE_TARGET="python3_7"
PYTHON_TARGETS="python2_7 python3_7"
QT_GRAPHICSSYSTEM="raster"
ROOT="/"
ROOTPATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/lib/llvm/11/bin:/usr/lib/llvm/10/bin"
RUBY_TARGETS="ruby25 ruby26"
SHELL="/bin/bash"
SHLVL="2"
SSH_TTY="/dev/pts/0"
SYSROOT="/"
TERM="tmux-256color"
TMUX="/tmp//tmux-0/default,3447,0"
TMUX_PANE="%3"
TWISTED_DISABLE_WRITING_OF_PLUGIN_CACHE="1"
USER="root"
USERLAND="GNU"
VIDEO_CARDS="vmware"
XDG_RUNTIME_DIR="/run/user/0"
XDG_SESSION_CLASS="user"
XDG_SESSION_ID="1"
XDG_SESSION_TYPE="tty"

[Comment 1 Michał Górny 2020-11-21 15:22:22 UTC]

What's your matplotlib version?

[Comment 2 Thomas Deutschmann (RETIRED) 2020-11-21 15:33:20 UTC]

dev-python/matplotlib-3.2.2-r2.

[Comment 3 Michał Górny 2020-11-21 15:46:35 UTC]

Can't reproduce.  I wonder if it's x86-specific.

[Comment 4 Arthur Zamarin 2021-12-13 19:01:29 UTC]

Most probably fixed "by mistake" upstream somewhere, as we can't reproduce and much newer versions are out for many components.
If repeated please reopen.

Thank you very much for the report.