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Bug 739816

Summary: media-libs/gegl-0.4.22 : fatal error: opencl/* no such file or directory
Product: Gentoo Linux Reporter: tonemgub
Component: Current packagesAssignee: Sergey Torokhov <torokhov-s-a>
Status: RESOLVED FIXED    
Severity: normal CC: erhard_f, proxy-maint
Priority: Normal Keywords: PullRequest
Version: unspecified   
Hardware: All   
OS: Linux   
See Also: https://github.com/gentoo/gentoo/pull/18095
Whiteboard:
Package list:
Runtime testing required: ---
Attachments: build.log
build.log
gegl-0.4.26.ebuild patched to force cltostring.py

Description tonemgub 2020-08-31 21:09:29 UTC
This package fails to install on my system as opencl headers are missing. Presumably needs a dependency.

Reproducible: Always
Comment 1 Jeroen Roovers (RETIRED) gentoo-dev 2020-08-31 21:12:41 UTC
Please attach the entire build log to this bug report.
Please post your `emerge --info' output in a comment.
Comment 2 tonemgub 2020-08-31 21:22:56 UTC
Created attachment 657670 [details]
build.log

I confirmed that headers are installed with: dev-util/opencl-headers-2020.03.13-r1


[ebuild  N     ] media-libs/gegl-0.4.22  USE="cairo -debug -ffmpeg -introspection -lcms -lensfun -openexr -pdf -raw -sdl -svg -test -tiff -umfpack -v4l -vala -webp" 

emerge --info

Portage 2.3.103 (python 3.7.8-final-0, default/linux/amd64/17.0/musl/hardened, gcc-9.3.0, musl-1.2.1, 4.9.207-gnu-x86_64 x86_64)
=================================================================
System uname: Linux-4.9.207-gnu-x86_64-x86_64-AMD-with-gentoo-2.6
KiB Mem:    16419760 total,   7876240 free
KiB Swap:   16777208 total,  16776828 free
Timestamp of repository gentoo: Sun, 30 Aug 2020 00:45:01 +0000
Head commit of repository gentoo: 3c7a291c078b0464550799a82ba3acffd398bb8e
Head commit of repository musl: 3f398db9084a88167580fbea1eb94bf16429c564

sh bash 5.0_p18
ld GNU ld (Gentoo 2.33.1 p2) 2.33.1
app-shells/bash:          5.0_p18::gentoo
dev-lang/perl:            5.30.3::gentoo
dev-lang/python:          2.7.18-r1::gentoo, 3.7.8-r2::gentoo, 3.8.5::gentoo
dev-util/cmake:           3.16.5::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/openrc:          0.42.1::gentoo
sys-apps/sandbox:         2.18::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.16.1-r1::gentoo
sys-devel/binutils:       2.33.1-r1::gentoo
sys-devel/gcc:            9.3.0-r1::gentoo
sys-devel/gcc-config:     2.3.1::gentoo
sys-devel/libtool:        2.4.6-r6::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 5.4-r1::gentoo (virtual/os-headers)
sys-libs/musl:            1.2.1::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-metamanifest: yes
    sync-rsync-verify-jobs: 1
    sync-rsync-extra-opts: 
    sync-rsync-verify-max-age: 24

musl
    location: /var/db/repos/musl
    sync-type: git
    sync-uri: https://anongit.gentoo.org/git/proj/musl.git
    masters: gentoo

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="@FREE"
CBUILD="x86_64-gentoo-linux-musl"
CFLAGS="-O2 -pipe"
CHOST="x86_64-gentoo-linux-musl"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="https://mirrors.rit.edu/gentoo/"
LANG="C.UTF8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j4"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl alsa amd64 branding bzip2 hardened iconv libglvnd libressl libtirpc ncurses nls nptl openmp pcre pie readline seccomp split-usr ssl ssp unicode xattr xtpax zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" CURL_SSL="libressl" ELIBC="musl" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2 php7-3" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_7" PYTHON_TARGETS="python2_7 python3_7" RUBY_TARGETS="ruby25" USERLAND="GNU" VIDEO_CARDS="nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 3 Sergey Torokhov 2020-09-07 21:10:17 UTC
The strange is that absent headers should be generated by python script "cltostring.py" from .cl files to *.cl.h.

Does this issue is reproduced for gegl-0.4.24 on your (musl) system?

Does it reproduce for emerge with MAKEOPTS="-j1"?
Comment 4 tonemgub 2020-09-09 14:43:56 UTC
Created attachment 659284 [details]
build.log

Unfortunately it still fails on -j1 and 0.4.24. Attached build log.
Comment 5 tonemgub 2020-10-29 18:18:14 UTC
Created attachment 669203 [details, diff]
gegl-0.4.26.ebuild patched to force cltostring.py

As you said, the cltostring.py is not being ran. I tried this even outside of portage and ninja silently ignores the instructions in build.meson for some reason.

As a work around, I added this to the ebuild, which allows the build to complete without error:

for file in *.cl; do
	if [ -f "$file" ]; then
	python cltostring.py $file
	fi
done
Comment 6 Sergey Torokhov 2020-10-31 17:06:27 UTC
I think this issue could be related to hardened and/pae + ninja. But cureently don't see another way to fix exclude the eay you proposed.

Maybe swithing backend of meson from ninja to emake also could fix it. Otherwise I will add your proposed patch to src_compile function.
Comment 7 Sergey Torokhov 2020-10-31 22:43:28 UTC
I will add your offered workaround fix to latest gegl-0.4.26-r1 with no change of previous versions.
Now waiting to approve pull request.
Comment 8 Larry the Git Cow gentoo-dev 2020-11-04 13:40:22 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=95443123ad571c58ed9efd244909ef900dafb83f

commit 95443123ad571c58ed9efd244909ef900dafb83f
Author:     Sergey Torokhov <torokhov-s-a@yandex.ru>
AuthorDate: 2020-10-31 22:32:53 +0000
Commit:     Joonas Niilola <juippis@gentoo.org>
CommitDate: 2020-11-04 13:39:33 +0000

    media-libs/gegl: workaround to fix build on hardened gentoo systems
    
    On gentoo hardened fatal error: opencl/* no such file or directory
    takes place due to opencl/meson.build doesn't produce appropriate
    headers from *.cl files.
    
    Closes: https://bugs.gentoo.org/739816
    
    Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru>
    Closes: https://github.com/gentoo/gentoo/pull/18095
    Signed-off-by: Joonas Niilola <juippis@gentoo.org>

 media-libs/gegl/gegl-0.4.26-r1.ebuild | 164 ++++++++++++++++++++++++++++++++++
 1 file changed, 164 insertions(+)
Comment 9 ernsteiswuerfel archtester 2021-01-02 21:16:05 UTC
*** Bug 763000 has been marked as a duplicate of this bug. ***