Bug 725306

Summary:	sci-biology/hmmer-2.3.2-r4 fails to compile: ld: cannot find -lsquid
Product:	Gentoo Linux	Reporter:	Agostino Sarubbo <ago>
Component:	Current packages	Assignee:	Gentoo Science Biology related packages <sci-biology>
Status:	RESOLVED FIXED
Severity:	normal
Priority:	Normal
Version:	unspecified
Hardware:	All
OS:	Linux
Whiteboard:
Package list:		Runtime testing required:	---
Bug Depends on:
Bug Blocks:	243502
Attachments:	build.log

Description Agostino Sarubbo gentoo-dev

2020-05-25 13:10:17 UTC

This is an auto-filed bug because sci-biology/hmmer fails to compile.
The issue was originally discovered on amd64, but it may be reproducible on other arches as well.
If you think that a different summary clarifies the issue better, feel free to change it.
Attached build log and emerge --info.

NOTE:
If you need further logs, feel free to ask.

Comment 1 Agostino Sarubbo gentoo-dev

2020-05-25 13:10:21 UTC

Created attachment 641712 [details]
build.log

build log and emerge --info

Comment 2 Larry the Git Cow gentoo-dev

2022-07-07 19:58:05 UTC

The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9215238aeb785b45c5c95d9008dcfc76a1ca9507

commit 9215238aeb785b45c5c95d9008dcfc76a1ca9507
Author:     David Seifert <soap@gentoo.org>
AuthorDate: 2022-07-07 19:56:55 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2022-07-07 19:56:55 +0000

    sci-biology/hmmer: update EAPI 6 -> 8 (2.3.2)
    
    Closes: https://bugs.gentoo.org/725306
    Signed-off-by: David Seifert <soap@gentoo.org>

 ...hmmer-2.3.2-r4.ebuild => hmmer-2.3.2-r5.ebuild} | 27 +++++++++++++---------
 1 file changed, 16 insertions(+), 11 deletions(-)