| Summary: | dev-python/pypy3-exe-7.3.0 can't be installed: [translation:ERROR] AssertionError: Cannot find C library, ctypes.util.find_library('c') returned None | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Přemysl Šťastný <p-j> |
| Component: | Current packages | Assignee: | Python Gentoo Team <python> |
| Status: | RESOLVED OBSOLETE | ||
| Severity: | major | CC: | jstein, mgorny, musl |
| Priority: | Normal | Keywords: | NeedPatch, UPSTREAM |
| Version: | unspecified | ||
| Hardware: | All | ||
| OS: | Linux | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
|
Description
Přemysl Šťastný
2020-05-08 17:32:42 UTC
Could you try without ccache? I have the same issue, applying the patch from this PR to python2_7 mitigates it: https://github.com/python/cpython/pull/18380 (In reply to Max Tottenham from comment #2) > I have the same issue, applying the patch from this PR to python2_7 > mitigates it: > > https://github.com/python/cpython/pull/18380 I might add that unlike the original report - I experienced this on amd64/musl, and it is a known issue due to the way CPython looks for library names. The output of my emerge --info follows: Portage 2.3.99 (python 3.7.7-final-0, default/linux/amd64/17.0/musl/hardened, gcc-9.3.0, musl-1.1.24, 5.4.38-gentoo-x86_64 x86_64) ================================================================= System uname: Linux-5.4.38-gentoo-x86_64-x86_64-AMD_Ryzen_5_3600_6-Core_Processor-with-gentoo-2.6 KiB Mem: 32809588 total, 26475108 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Sun, 17 May 2020 21:00:01 +0000 Head commit of repository gentoo: d7e21fcab1e828d5818511fd9ca7f433ee9a3c0c Head commit of repository musl: 5bdd61c76ea22a13918f70773406541d1c118620 Head commit of repository smaeul: e1f5ca0b098e65662f52e874aadcc72588f1b28e sh bash 5.0_p17 ld GNU ld (Gentoo 2.33.1 p2) 2.33.1 app-shells/bash: 5.0_p17::gentoo dev-lang/perl: 5.30.1::gentoo dev-lang/python: 2.7.18::gentoo, 3.6.10-r2::gentoo, 3.7.7-r2::gentoo, 3.8.2-r2::gentoo dev-util/cmake: 3.16.5::gentoo sys-apps/baselayout: 2.6-r1::gentoo sys-apps/openrc: 0.42.1::gentoo sys-apps/sandbox: 2.13::musl sys-devel/autoconf: 2.13-r1::gentoo, 2.69-r4::gentoo sys-devel/automake: 1.16.1-r1::gentoo sys-devel/binutils: 2.33.1-r1::musl sys-devel/gcc: 9.3.0::musl sys-devel/gcc-config: 2.2.1::gentoo sys-devel/libtool: 2.4.6-r6::gentoo sys-devel/make: 4.2.1-r4::gentoo sys-kernel/linux-headers: 5.4::gentoo (virtual/os-headers) sys-libs/musl: 1.1.24::gentoo Repositories: gentoo location: /var/db/repos/gentoo sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 sync-rsync-verify-metamanifest: yes sync-rsync-verify-max-age: 24 sync-rsync-verify-jobs: 1 sync-rsync-extra-opts: local location: /var/db/repos/local masters: gentoo musl location: /var/db/repos/musl sync-type: git sync-uri: https://git@github.com/gentoo/musl.git masters: gentoo priority: 49 smaeul location: /var/db/repos/smaeul sync-type: git sync-uri: https://git@github.com/smaeul/portage-overlay.git masters: gentoo priority: 51 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="@FREE" CBUILD="x86_64-gentoo-linux-musl" CFLAGS="-O2 -pipe -march=native -mtune=native" CHOST="x86_64-gentoo-linux-musl" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -pipe -march=native -mtune=native" DISTDIR="/var/cache/distfiles" ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-O2 -pipe -march=native -mtune=native" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe -march=native -mtune=native" GENTOO_MIRRORS="https://ftp.fau.de/gentoo rsync://ftp.fau.de/gentoo rsync://mirror.leaseweb.com/gentoo/ https://mirror.bytemark.co.uk/gentoo/ rsync://mirror.bytemark.co.uk/gentoo/ https://mirrors.evowise.com/gentoo/ https://www.mirrorservice.org/sites/distfiles.gentoo.org/ rsync://rsync.mirrorservice.org/distfiles.gentoo.org/" INSTALL_MASK="charset.alias locale.alias" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j14" PKGDIR="/var/cache/binpkgs" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="acl amd64 bzip2 crypt hardened iconv ipv6 libtirpc ncurses nls nptl openmp pam pcre pie readline seccomp split-usr ssl ssp unicode xattr xtpax zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="musl" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_7" PYTHON_TARGETS="python2_7 python3_7" RUBY_TARGETS="ruby24 ruby25" USERLAND="GNU" VIDEO_CARDS="amdgpu radeonsi" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, LANG, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS It doesn't work with or without ccache.
---
tardis /home/p/p-core # emerge --info '=dev-python/pypy3-exe-7.3.0::gentoo'
Portage 2.3.99 (python 3.7.7-final-0, default/linux/amd64/17.1/hardened, gcc-9.2.0, glibc-2.30-r8, 5.4.38-gentoo x86_64)
=================================================================
System Settings
=================================================================
System uname: Linux-5.4.38-gentoo-x86_64-Intel-R-_Core-TM-_i7-4510U_CPU_@_2.00GHz-with-gentoo-2.6
KiB Mem: 8058692 total, 2549264 free
KiB Swap: 4048572 total, 3047996 free
Timestamp of repository gentoo: Mon, 25 May 2020 00:45:01 +0000
Head commit of repository gentoo: 77960c6cf984530dbcab9fe507e170e7a2fe7dcf
Timestamp of repository libressl: Fri, 22 May 2020 02:09:13 +0000
Head commit of repository libressl: 7409b3c1ceb82af847b4e196aa4b66c2a98bb085
sh bash 5.0_p17
ld GNU ld (Gentoo 2.33.1 p2) 2.33.1
ccache version 3.7.7 [disabled]
app-shells/bash: 5.0_p17::gentoo
dev-java/java-config: 2.2.0-r4::gentoo
dev-lang/perl: 5.30.1::gentoo
dev-lang/python: 2.7.18::gentoo, 3.6.10-r2::gentoo, 3.7.7-r2::gentoo, 3.8.2-r2::gentoo
dev-util/ccache: 3.7.7-r1::gentoo
dev-util/cmake: 3.16.5::gentoo
sys-apps/baselayout: 2.6-r1::gentoo
sys-apps/openrc: 0.42.1::gentoo
sys-apps/sandbox: 2.13::gentoo
sys-devel/autoconf: 2.13-r1::gentoo, 2.69-r4::gentoo
sys-devel/automake: 1.13.4-r2::gentoo, 1.16.1-r1::gentoo
sys-devel/binutils: 2.33.1-r1::gentoo
sys-devel/gcc: 9.2.0-r2::gentoo, 9.3.0::gentoo
sys-devel/gcc-config: 2.2.1::gentoo
sys-devel/libtool: 2.4.6-r6::gentoo
sys-devel/make: 4.2.1-r4::gentoo
sys-kernel/linux-headers: 5.4::gentoo (virtual/os-headers)
sys-libs/glibc: 2.30-r8::gentoo
Repositories:
gentoo
location: /var/db/repos/gentoo
sync-type: rsync
sync-uri: rsync://rsync.gentoo.org/gentoo-portage
priority: -1000
sync-rsync-verify-jobs: 1
sync-rsync-verify-metamanifest: yes
sync-rsync-extra-opts:
sync-rsync-verify-max-age: 24
crossdev
location: /var/db/repos/crossdev
masters: gentoo
libressl
location: /var/db/repos/libressl
sync-type: git
sync-uri: https://github.com/gentoo-mirror/libressl.git
masters: gentoo
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=native -ggdb"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=native -ggdb"
DISTDIR="/var/cache/distfiles"
EMERGE_DEFAULT_OPTS=" --complete-graph --with-bdeps=y"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe -march=native -ggdb"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe -march=native -ggdb"
GENTOO_MIRRORS="https://mirrors.tuna.tsinghua.edu.cn/gentoo ftp://ftp.fi.muni.cz/pub/linux/gentoo/ http://ftp.fi.muni.cz/pub/linux/gentoo/ rsync://ftp.fi.muni.cz/pub/linux/gentoo/ ftp://mirror.dkm.cz/gentoo/ https://mirror.dkm.cz/gentoo/ http://mirror.dkm.cz/gentoo/ rsync://mirror.dkm.cz/gentoo/ http://gentoo.mirror.web4u.cz/ ftp://gentoo.mirror.web4u.cz/"
LANG="C.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j4"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X acl alsa alsa-plugin amd64 apng bash-completion bindist bluetooth btrfs bzip2 cairo cgroups crypt cups dbus device-mapper djvu egl elogind equalizer firmware fontconfig fortran glpk gtk gui hardened iconv icu ipv6 jit jpeg kde libressl libtirpc lua luajit multilib ncurses nls nptl ogg opengl openmp pam pcre pdf pie plasma png postproc printsupport pulseaudio qt5 readline script seccomp secure-delete split-usr sqlite ssl ssp svg tmux tremor truetype unicode vim vim-syntax vorbis wayland xattr xtpax xwayland zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" CURL_SSL="libressl" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="mouse keyboard synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_7" PYTHON_TARGETS="python2_7 python3_7" RUBY_TARGETS="ruby24 ruby25" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Here are the steps to at least allow pypy* packages to be installed on musl based installations. While, technically, alpine patches are workarounds and this must be fixed by upstream python, they work Steps: 1. apply musl-find_library.patch to python:2.7 and rebuild it 2. emerge -1 dev-python/pypy-exe 3. apply musl-find_library.patch to dev-python/pypy sources 4. apply musl-find_library.patch dev-python/pypy3-exe sources 5. emerge -1 dev-python/pypy 6. emerge -1 dev-python/pypy3-exe 7. emerge dev-python/pypy3 ( or oneshot, if it's only dep to something ) (In reply to Oleh from comment #5) > Here are the steps to at least allow pypy* packages to be installed on musl > based > installations. While, technically, alpine patches are workarounds and this > must be fixed by upstream python, they work > Steps: > 1. apply musl-find_library.patch to python:2.7 and rebuild it > 2. emerge -1 dev-python/pypy-exe > 3. apply musl-find_library.patch to dev-python/pypy sources > 4. apply musl-find_library.patch dev-python/pypy3-exe sources Are you sure that one goes to pypy and the other to pypy3-exe? That sounds weird. i had to patch pypy prior to installing pypy3-exe, otherwise this very issue with ctypes.util_* observed again. From what i was seeing pypy used to compile pypy3-exe. i cannot tell, whether anything was wrong on my side Yeah but I'm surprised pypy3-exe needs it but not pypy3 (I guess it's broken, you just aren't using it to build anything ;-)) and not pypy-exe. confirmed on musl |
