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Bug 716082

Summary: sci-biology/recon-1.08 : bolts.h: error: unknown type name int32_t
Product: Gentoo Linux Reporter: Toralf Förster <toralf>
Component: Current packagesAssignee: Gentoo musl team <musl>
Status: RESOLVED FIXED    
Severity: normal CC: sci-biology
Priority: Normal    
Version: unspecified   
Hardware: All   
OS: Linux   
Whiteboard: stdint.h
Package list:
Runtime testing required: ---
Bug Depends on:    
Bug Blocks: 713786    
Attachments: emerge-info.txt
emerge-history.txt
environment
etc.portage.tbz2
sci-biology:recon-1.08:20200403-201259.log
temp.tbz2

Description Toralf Förster gentoo-dev 2020-04-03 20:47:41 UTC
In file included from msps.h:3,
                 from imagespread.c:2:
bolts.h:13:1: error: unknown type name int32_t
   13 | int32_t seq_no;
      | ^~~~~~~
In file included from seqlist.h:2,

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.0_musl-20200328-141627

  -------------------------------------------------------------------

  Please see the tracker bug for details.

gcc-config -l:
 [1] x86_64-gentoo-linux-musl-9.3.0 *
clang version 10.0.0 
Target: x86_64-gentoo-linux-musl
Thread model: posix
InstalledDir: /usr/lib/llvm/10/bin
/usr/lib/llvm/10
10.0.0
Available Python interpreters, in order of preference:
  [1]   python3.8
  [2]   python3.7
  [3]   python3.6
  [4]   python2.7 (fallback)
Available Ruby profiles:
  [1]   ruby24 (with Rubygems)
  [2]   ruby25 (with Rubygems) *
Available Rust versions:
  [1]   rust-1.42.0 *
The following VMs are available for generation-2:

timestamp of HEAD at this tinderbox image:
/var/db/repos/gentoo	Fri Apr  3 19:07:52 UTC 2020
/var/db/repos/musl	Thu Apr  2 19:02:24 UTC 2020

emerge -qpvO sci-biology/recon
[ebuild  N    ] sci-biology/recon-1.08  USE="-examples"
Comment 1 Toralf Förster gentoo-dev 2020-04-03 20:47:44 UTC
Created attachment 629566 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2020-04-03 20:47:47 UTC
Created attachment 629568 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2020-04-03 20:47:49 UTC
Created attachment 629570 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2020-04-03 20:47:52 UTC
Created attachment 629572 [details]
etc.portage.tbz2
Comment 5 Toralf Förster gentoo-dev 2020-04-03 20:47:55 UTC
Created attachment 629574 [details]
sci-biology:recon-1.08:20200403-201259.log
Comment 6 Toralf Förster gentoo-dev 2020-04-03 20:47:57 UTC
Created attachment 629576 [details]
temp.tbz2
Comment 7 Michael 'veremitz' Everitt 2020-04-27 00:00:51 UTC
Upstream should consider using portable POSIX-compatible integer types as
defined in
https://pubs.opengroup.org/onlinepubs/009695399/basedefs/stdint.h.html .
Comment 8 Larry the Git Cow gentoo-dev 2022-07-07 19:58:07 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e00ee2933cf56d8a51e0abb0326ff4138e646cfe

commit e00ee2933cf56d8a51e0abb0326ff4138e646cfe
Author:     David Seifert <soap@gentoo.org>
AuthorDate: 2022-07-07 19:57:10 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2022-07-07 19:57:10 +0000

    sci-biology/recon: update EAPI 6 -> 8
    
    Closes: https://bugs.gentoo.org/716082
    Signed-off-by: David Seifert <soap@gentoo.org>

 .../recon-1.08-Wimplicit-function-declaration.patch  | 20 ++++++++++++++++++++
 .../{recon-1.08.ebuild => recon-1.08-r1.ebuild}      | 16 ++++++++--------
 2 files changed, 28 insertions(+), 8 deletions(-)