Bug 687360

Summary:	dev-lang/R-3.5.3 : [TEST] running code in reg-tests-1d.R make[3]: *** [Makefile.common:105: reg-tests-1d.Rout] Error 1
Product:	Gentoo Linux	Reporter:	Toralf Förster <toralf>
Component:	Current packages	Assignee:	Gentoo Science Mathematics related packages <sci-mathematics>
Status:	RESOLVED FIXED
Severity:	normal	CC:	mjo, sam
Priority:	Normal	Keywords:	TESTFAILURE
Version:	unspecified
Hardware:	All
OS:	Linux
Whiteboard:
Package list:		Runtime testing required:	---
Attachments:	emerge-info.txt dev-lang:R-3.5.3:20190604-045923.log emerge-history.txt environment etc.portage.tbz2 logs.tbz2 temp.tbz2

Description Toralf Förster gentoo-dev

2019-06-04 15:13:56 UTC

running code in 'reg-tests-1b.R' ... OK
running code in 'reg-tests-1c.R' ... OK
running code in 'reg-tests-1d.R' ...make[3]: *** [Makefile.common:105: reg-tests-1d.Rout] Error 1
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests'
make[2]: *** [Makefile.common:291: test-Reg] Error 2
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.3/work/R-3.5.3/tests'

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1-desktop-plasma_test_20190531-023321

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-7.3.1
 [2] x86_64-pc-linux-gnu-8.3.1
 [3] x86_64-pc-linux-gnu-9.1.0 *

Available Python interpreters, in order of preference:
  [1]   python3.6
  [2]   python2.7 (fallback)

Available Rust versions:
  [1]   rust-1.35.0 *
java-config:
The following VMs are available for generation-2:
*)	IcedTea JDK 3.12.0 [icedtea-bin-8]
Available Java Virtual Machines:
  [1]   icedtea-bin-8  system-vm

emerge -qpvO dev-lang/R
[ebuild  N    ] dev-lang/R-3.5.3  USE="X cairo jpeg nls openmp png readline tiff -doc -icu -java -lapack -minimal -perl (-prefix) -profile -static-libs -tk"

Comment 1 Toralf Förster gentoo-dev

2019-06-04 15:13:58 UTC

Created attachment 578734 [details]
emerge-info.txt

Comment 2 Toralf Förster gentoo-dev

2019-06-04 15:14:01 UTC

Created attachment 578736 [details]
dev-lang:R-3.5.3:20190604-045923.log

Comment 3 Toralf Förster gentoo-dev

2019-06-04 15:14:04 UTC

Created attachment 578738 [details]
emerge-history.txt

Comment 4 Toralf Förster gentoo-dev

2019-06-04 15:14:07 UTC

Created attachment 578740 [details]
environment

Comment 5 Toralf Förster gentoo-dev

2019-06-04 15:14:10 UTC

Created attachment 578742 [details]
etc.portage.tbz2

Comment 6 Toralf Förster gentoo-dev

2019-06-04 15:14:12 UTC

Created attachment 578744 [details]
logs.tbz2

Comment 7 Toralf Förster gentoo-dev

2019-06-04 15:14:15 UTC

Created attachment 578746 [details]
temp.tbz2

Comment 8 Rolf Eike Beer archtester

2021-07-10 11:05:57 UTC

Similar problem with 4.0.5-r1 on sparc:

running code in 'reg-tests-1b.R' ...make[3]: *** [Makefile.common:106: reg-tests-1b.Rout] Error 1

Comment 9 David Seifert gentoo-dev

2022-01-26 10:57:58 UTC

On 4.1.2:
running code in 'reg-tests-1d.R' ... OK

I'll close this for now, seeing tests complete for me on 4.1.2.