| Summary: | sci-biology/snpfile-2.0.1-r2 : snpfile.hh:32:10: fatal error: boost/signal.hpp: No such file or directory | ||
|---|---|---|---|
| Product: | Gentoo Linux | Reporter: | Toralf Förster <toralf> |
| Component: | Current packages | Assignee: | Gentoo Science Biology related packages <sci-biology> |
| Status: | RESOLVED FIXED | ||
| Severity: | normal | Keywords: | PMASKED |
| Priority: | Normal | ||
| Version: | unspecified | ||
| Hardware: | All | ||
| OS: | Linux | ||
| Whiteboard: | |||
| Package list: | Runtime testing required: | --- | |
| Bug Depends on: | |||
| Bug Blocks: | 671712 | ||
| Attachments: |
emerge-info.txt
emerge-history.txt environment etc.portage.tbz2 logs.tbz2 sci-biology:snpfile-2.0.1-r2:20190418-034223.log temp.tbz2 |
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Created attachment 573278 [details]
emerge-info.txt
Created attachment 573280 [details]
emerge-history.txt
Created attachment 573282 [details]
environment
Created attachment 573284 [details]
etc.portage.tbz2
Created attachment 573286 [details]
logs.tbz2
Created attachment 573288 [details]
sci-biology:snpfile-2.0.1-r2:20190418-034223.log
Created attachment 573290 [details]
temp.tbz2
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a62057456d6c9f433a04233438d7ce2ddc3463b5 commit a62057456d6c9f433a04233438d7ce2ddc3463b5 Author: David Seifert <soap@gentoo.org> AuthorDate: 2019-04-19 10:02:56 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2019-04-19 10:02:56 +0000 package.mask: Last rite sci-biology/{blossoc,snpfile} Bug: https://bugs.gentoo.org/683762 Signed-off-by: David Seifert <soap@gentoo.org> profiles/package.mask | 7 +++++++ 1 file changed, 7 insertions(+) The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=68e3a80a1418cd79a1a32a00cd193a3cffe70974 commit 68e3a80a1418cd79a1a32a00cd193a3cffe70974 Author: David Seifert <soap@gentoo.org> AuthorDate: 2019-05-19 21:50:02 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2019-05-19 21:50:02 +0000 sci-biology/{blossoc,snpfile}: Remove last-rited pkgs Closes: https://bugs.gentoo.org/683762 Signed-off-by: David Seifert <soap@gentoo.org> profiles/package.mask | 7 - sci-biology/blossoc/Manifest | 1 - sci-biology/blossoc/blossoc-1.4.0-r1.ebuild | 36 -- .../files/blossoc-1.4.0-fix-build-system.patch | 256 ---------- .../blossoc/files/blossoc-1.4.0-gcc43.patch | 15 - sci-biology/blossoc/metadata.xml | 8 - sci-biology/snpfile/Manifest | 1 - .../snpfile/files/snpfile-2.0.1-ax-boost.patch | 35 -- .../snpfile/files/snpfile-2.0.1-gcc44.patch | 12 - .../snpfile/files/snpfile-2.0.1-gentoo.diff | 533 --------------------- sci-biology/snpfile/files/snpfile-2.0.1-gold.patch | 23 - sci-biology/snpfile/metadata.xml | 8 - sci-biology/snpfile/snpfile-2.0.1-r2.ebuild | 46 -- 13 files changed, 981 deletions(-) |
x86_64-pc-linux-gnu-g++ -DHAVE_CONFIG_H -I. -Wall -I/usr/include -O2 -pipe -march=native -c -o text2snpfile.o text2snpfile.cc In file included from text2snpfile.cc:25: snpfile.hh:32:10: fatal error: boost/signal.hpp: No such file or directory #include <boost/signal.hpp> ^~~~~~~~~~~~~~~~~~ compilation terminated. ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1-desktop-gnome-systemd_20190415-201837 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-8.3.0 * Available Python interpreters, in order of preference: [1] python3.6 [2] python2.7 (fallback) Available Ruby profiles: [1] ruby24 (with Rubygems) [2] ruby25 (with Rubygems) [3] ruby26 (with Rubygems) * java-config: The following VMs are available for generation-2: *) IcedTea JDK 3.10.0 [icedtea-bin-8] Available Java Virtual Machines: [1] icedtea-bin-8 system-vm emerge -qpvO sci-biology/snpfile [ebuild N ] sci-biology/snpfile-2.0.1-r2 USE="-static-libs"