Bug 671116 – dev-db/mariadb-10.2.19 with dev-db/mariadb-connector-c-3.0.6-r1: Detected file collision(s)

• Product: Gentoo Linux
• Status: RESOLVED FIXED

[Description Tomáš Mózes 2018-11-14 08:12:13 UTC]

* Package:    dev-db/mariadb-10.2.19
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        abi_x86_64 amd64 backup elibc_glibc innodb-lz4 innodb-lzo innodb-snappy kernel_linux pam perl server userland_GNU
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
...
   usr/bin/mysql_plugin
   usr/bin/mysqlbinlog
   usr/bin/mysqladmin
   usr/bin/mysqlslap
   usr/bin/mysql_client_test
   usr/sbin/mysqld
   usr/bin/mysql_tzinfo_to_sql
   usr/libexec/mariadb/my_print_defaults
   usr/libexec/mariadb/perror
 * checking 529 files for package collisions
 * This package will overwrite one or more files that may belong to other
 * packages (see list below). You can use a command such as `portageq
 * owners / <filename>` to identify the installed package that owns a
 * file. If portageq reports that only one package owns a file then do
 * NOT file a bug report. A bug report is only useful if it identifies at
 * least two or more packages that are known to install the same file(s).
 * If a collision occurs and you can not explain where the file came from
 * then you should simply ignore the collision since there is not enough
 * information to determine if a real problem exists. Please do NOT file
 * a bug report at https://bugs.gentoo.org/ unless you report exactly
 * which two packages install the same file(s). See
 * https://wiki.gentoo.org/wiki/Knowledge_Base:Blockers for tips on how
 * to solve the problem. And once again, please do NOT file a bug report
 * unless you have completely understood the above message.
 * 
 * Detected file collision(s):
 * 
 *      /usr/lib64/mariadb/plugin/dialog.so
 *      /usr/lib64/mariadb/plugin/mysql_clear_password.so
 *      /usr/lib64/mariadb/plugin/sha256_password.so
 * 
 * Searching all installed packages for file collisions...
 * 
 * Press Ctrl-C to Stop
 * 
 * dev-db/mariadb-connector-c-3.0.6-r1:0::gentoo
 *      /usr/lib64/mariadb/plugin/dialog.so
 *      /usr/lib64/mariadb/plugin/mysql_clear_password.so
 *      /usr/lib64/mariadb/plugin/sha256_password.so
 * 


Portage 2.3.51 (python 2.7.15-final-0, default/linux/amd64/17.0, gcc-8.2.0, glibc-2.27-r6, 4.19.1-gentoo x86_64)
=================================================================
System uname: Linux-4.19.1-gentoo-x86_64-Intel-R-_Core-TM-_i5-3570_CPU_@_3.40GHz-with-gentoo-2.6
KiB Mem:    16320752 total,   7338664 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Wed, 14 Nov 2018 04:15:01 +0000
Head commit of repository gentoo: 1dbaae64166fb4a14a7c61014dfae3c85f85ccb4
sh bash 4.4_p23
ld GNU ld (Gentoo 2.31.1 p3) 2.31.1
app-shells/bash:          4.4_p23::gentoo
dev-java/java-config:     2.2.0-r4::gentoo
dev-lang/perl:            5.26.2::gentoo
dev-lang/python:          2.7.15::gentoo, 3.5.5-r1::gentoo, 3.6.6::gentoo, 3.7.0::gentoo
dev-util/cmake:           3.12.3::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/openrc:          0.39.2::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.13.4-r2::gentoo, 1.15.1-r2::gentoo, 1.16.1-r1::gentoo
sys-devel/binutils:       2.31.1-r1::gentoo
sys-devel/gcc:            8.2.0-r4::gentoo
sys-devel/gcc-config:     2.0::gentoo
sys-devel/libtool:        2.4.6-r5::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 4.19::gentoo (virtual/os-headers)
sys-libs/glibc:           2.27-r6::gentoo

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-mtune=native -O2 -pipe -frecord-gcc-switches"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.1/ext-active/ /etc/php/apache2-php7.2/ext-active/ /etc/php/cgi-php7.1/ext-active/ /etc/php/cgi-php7.2/ext-active/ /etc/php/cli-php7.1/ext-active/ /etc/php/cli-php7.2/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-mtune=native -O2 -pipe -frecord-gcc-switches"
DISTDIR="/usr/portage/distfiles"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-mtune=native -O2 -pipe -frecord-gcc-switches"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-mtune=native -O2 -pipe -frecord-gcc-switches"
GENTOO_MIRRORS="http://tux.rainside.sk/gentoo/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="en"
MAKEOPTS="-j4"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl amd64 berkdb bzip2 cli crypt cxx dri fortran gdbm iconv ipv6 libtirpc multilib ncurses nptl openmp pam pcre readline seccomp ssl tcpd unicode xattr zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_core authn_dbm authn_file authz_core authz_dbm authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir env expires ext_filter file_cache filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias watchdog proxy proxy_connect proxy_fcgi proxy_http" CALLIGRA_FEATURES="karbon plan sheets stage words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2 aes avx f16c popcnt sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64 xen pc" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" NGINX_MODULES_HTTP="access charset gzip limit_conn limit_req log proxy rewrite gunzip upstream_check stub_status geoip2" NGINX_MODULES_STREAM="geoip2" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-1 php7-2" POSTGRES_TARGETS="postgres9_5 postgres10" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_5 python3_6 python3_7 pypy pypy3" RUBY_TARGETS="ruby23 ruby24 ruby25" USERLAND="GNU" VIDEO_CARDS="intel i915 i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

[Comment 1 Tomáš Mózes 2018-11-14 08:13:03 UTC]

Created attachment 555078 [details]
build.log.bz2

[Comment 2 Opportunist 2018-11-14 12:57:27 UTC]

Confirm this.

[Comment 3 Larry the Git Cow 2018-11-14 15:41:23 UTC]

The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7fe8a7def353a51345f9cfecf0685f23af840719

commit 7fe8a7def353a51345f9cfecf0685f23af840719
Author:     Brian Evans <[e-mail]>
AuthorDate: 2018-11-14 15:40:15 +0000
Commit:     Brian Evans <[e-mail]>
CommitDate: 2018-11-14 15:40:15 +0000

    dev-db/mariadb: Fix collisions with mariadb-connector-c
    
    Also speed up building by removing unnecessary plugins when they will not be used
    
    Closes: https://bugs.gentoo.org/671116
    Signed-off-by: Brian Evans <[e-mail]>

 dev-db/mariadb/mariadb-10.2.19.ebuild | 47 +++++++++++++++++++++++++++++------
 1 file changed, 40 insertions(+), 7 deletions(-)

[Comment 4 Brian Evans (RETIRED) 2018-11-14 16:18:39 UTC]

*** Bug 671134 has been marked as a duplicate of this bug. ***

[Comment 5 Tomáš Mózes 2018-11-14 18:37:04 UTC]

Thank you