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Bug 669652

Summary: sys-apps/hwloc-2.0.2 fails test test-lstopo.sh
Product: Gentoo Linux Reporter: eroen <gentoo>
Component: Current packagesAssignee: Gentoo Cluster Team <cluster>
Status: UNCONFIRMED ---    
Severity: normal Keywords: TESTFAILURE
Priority: Normal    
Version: unspecified   
Hardware: All   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---
Attachments: sys-apps/hwloc-2.0.2:20181025-234954.log
test-suite.log

Description eroen 2018-10-25 23:56:17 UTC
Created attachment 553062 [details]
sys-apps/hwloc-2.0.2:20181025-234954.log

Fwiw, this does not fail in hwloc-1.11.11 on the same machine.

make  check-TESTS
make[3]: Entering directory '/var/tmp/portage/sys-apps/hwloc-2.0.2/work/hwloc-2.0.2-abi_x86_64.amd64/utils/lstopo'
make[4]: Entering directory '/var/tmp/portage/sys-apps/hwloc-2.0.2/work/hwloc-2.0.2-abi_x86_64.amd64/utils/lstopo'
FAIL: test-lstopo.sh
============================================================================
Testsuite summary for hwloc 2.0.2
============================================================================
# TOTAL: 1
# PASS:  0
# SKIP:  0
# XFAIL: 0
# FAIL:  1
# XPASS: 0
# ERROR: 0
============================================================================
See utils/lstopo/test-suite.log
Please report to http://github.com/open-mpi/hwloc/issues
============================================================================
make[4]: *** [Makefile:1390: test-suite.log] Error 1
make[4]: Leaving directory '/var/tmp/portage/sys-apps/hwloc-2.0.2/work/hwloc-2.0.2-abi_x86_64.amd64/utils/lstopo'
make[3]: *** [Makefile:1498: check-TESTS] Error 2
make[3]: Leaving directory '/var/tmp/portage/sys-apps/hwloc-2.0.2/work/hwloc-2.0.2-abi_x86_64.amd64/utils/lstopo'
make[2]: *** [Makefile:1571: check-am] Error 2
make[2]: Leaving directory '/var/tmp/portage/sys-apps/hwloc-2.0.2/work/hwloc-2.0.2-abi_x86_64.amd64/utils/lstopo'
make[1]: *** [Makefile:454: check-recursive] Error 1
make[1]: Leaving directory '/var/tmp/portage/sys-apps/hwloc-2.0.2/work/hwloc-2.0.2-abi_x86_64.amd64/utils'
make: *** [Makefile:629: check-recursive] Error 1
 * ERROR: sys-apps/hwloc-2.0.2::gentoo failed (test phase):
 *   Make check failed. See above for details.
 * 
 * Call stack:
 *            ebuild.sh, line  124:  Called src_test
 *          environment, line 3375:  Called multilib-minimal_src_test
 *          environment, line 2629:  Called multilib_foreach_abi 'multilib-minimal_abi_src_test'
 *          environment, line 2802:  Called multibuild_foreach_variant '_multilib_multibuild_wrapper' 'multilib-minimal_abi_src_test'
 *          environment, line 2494:  Called _multibuild_run '_multilib_multibuild_wrapper' 'multilib-minimal_abi_src_test'
 *          environment, line 2492:  Called _multilib_multibuild_wrapper 'multilib-minimal_abi_src_test'
 *          environment, line  541:  Called multilib-minimal_abi_src_test
 *          environment, line 2625:  Called default_src_test
 *   phase-functions.sh, line  897:  Called __eapi0_src_test
 *     phase-helpers.sh, line  816:  Called die
 * The specific snippet of code:
 *   		$emake_cmd ${internal_opts} check || \
 *   			die "Make check failed. See above for details."
Comment 1 eroen 2018-10-25 23:57:10 UTC
Created attachment 553064 [details]
test-suite.log

FAIL: test-lstopo.sh
====================

Device open failed, aborting...
Device open failed, aborting...
cl_get_gt_device(): error, unknown device: ffffffff
Machine (7812MB total)
  Package L#0
    NUMANode L#0 (P#0 7812MB)
    L3 L#0 (3072KB)
      L2 L#0 (256KB) + L1d L#0 (32KB) + L1i L#0 (32KB) + Core L#0
        PU L#0 (P#0)
        PU L#1 (P#1)
      L2 L#1 (256KB) + L1d L#1 (32KB) + L1i L#1 (32KB) + Core L#1
        PU L#2 (P#2)
        PU L#3 (P#3)
  HostBridge
    PCI 00:02.0 (VGA)
    PCI 00:19.0 (Ethernet)
      Net "eth0"
    PCIBridge
      PCI 03:00.0 (Network)
        Net "wlan0"
    PCI 00:1f.2 (SATA)
      Block(Disk) "sda"
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
Device open failed, aborting...
--- /var/tmp/portage/sys-apps/hwloc-2.0.2/work/hwloc-2.0.2/utils/lstopo/test-lstopo.output	2018-01-26 09:56:03.000000000 +0100
+++ /var/tmp/portage/sys-apps/hwloc-2.0.2/temp/fooan96e6/test-lstopo.output	2018-10-26 01:51:23.443015260 +0200
@@ -0,0 +1,5 @@
+cl_get_gt_device(): error, unknown device: ffffffff
+cl_get_gt_device(): error, unknown device: ffffffff
+cl_get_gt_device(): error, unknown device: ffffffff
+cl_get_gt_device(): error, unknown device: ffffffff
+cl_get_gt_device(): error, unknown device: ffffffff
FAIL test-lstopo.sh (exit status: 1)
Comment 2 eroen 2018-10-25 23:58:12 UTC
eroen@occam ~ $ emerge --info '=sys-apps/hwloc-2.0.2::gentoo'
Portage 2.3.51 (python 3.7.0-final-0, default/linux/amd64/17.0/hardened, gcc-8.2.0, glibc-2.27-r6, 4.18.7-gentoo-o0 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.18.7-gentoo-o0-x86_64-Intel-R-_Core-TM-_i5-2520M_CPU_@_2.50GHz-with-gentoo-2.6
KiB Mem:     7999296 total,   2620192 free
KiB Swap:   16777212 total,  16765168 free
Timestamp of repository gentoo: Thu, 25 Oct 2018 12:30:01 +0000
Head commit of repository gentoo: 66678e8f6caa8761e709e4d8119e947aa4e056f1
Timestamp of repository eroen: Sun, 30 Oct 2016 21:58:42 +0000
Head commit of repository sapher: 9ef31d0bf6a902342746fb03a445d4f8b7ddabef

Head commit of repository wiktorb: 2436f2d433769b4a7c69a4088dbc5acd2645c38c

Head commit of repository gentoo-snappy: 0ea79c799ebe1bc6cd924b9dd707b710eea24e83

Head commit of repository stuff: 1b4eeb31eb3b388e3130a7955410cdd748bcc494

sh bash 4.4_p23
ld GNU ld (Gentoo 2.31.1 p3) 2.31.1
ccache version 3.5 [disabled]
app-shells/bash:          4.4_p23::gentoo
dev-java/java-config:     2.2.0-r4::gentoo
dev-lang/perl:            5.26.2::gentoo
dev-lang/python:          2.7.15::gentoo, 3.4.8-r1::gentoo, 3.5.5-r1::gentoo, 3.6.6::gentoo, 3.7.0::gentoo
dev-util/ccache:          3.5::gentoo
dev-util/cmake:           3.12.2::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/openrc:          0.39.1::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.11.6-r3::gentoo, 1.13.4-r2::gentoo, 1.15.1-r2::gentoo, 1.16.1-r1::gentoo
sys-devel/binutils:       2.31.1-r1::gentoo
sys-devel/gcc:            6.4.0-r4::gentoo, 7.3.0-r5::gentoo, 8.2.0-r3::gentoo
sys-devel/gcc-config:     2.0::gentoo
sys-devel/libtool:        2.4.6-r5::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 4.19::gentoo (virtual/os-headers)
sys-libs/glibc:           2.27-r6::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-jobs: 1
    sync-rsync-extra-opts: 
    sync-rsync-verify-metamanifest: yes

crossdev
    location: /var/lib/portage/crossdev
    masters: gentoo gamerlay eroen

eroen
    location: /usr/local/portage
    masters: gentoo
    priority: 0

sapher
    location: /var/lib/overlays/sapher
    sync-type: git
    sync-uri: https://github.com/apinsard/sapher-overlay.git
    masters: gentoo

wiktorb
    location: /var/lib/overlays/wiktorb
    sync-type: git
    sync-uri: https://github.com/wiktor-b/overlay.git
    masters: gentoo

dotnet
    location: /var/lib/layman/dotnet
    masters: gentoo
    priority: 50

enlightenment
    location: /var/lib/layman/enlightenment
    masters: gentoo
    priority: 50

flora
    location: /var/lib/layman/flora
    masters: gentoo
    priority: 50

gamerlay
    location: /var/lib/layman/gamerlay
    masters: gentoo
    priority: 50

gentoo-snappy
    location: /usr/local/portage/gentoo-snappy
    sync-type: git
    sync-uri: https://github.com/zyga/gentoo-snappy.git
    masters: gentoo
    priority: 50

glc
    location: /var/lib/layman/glc
    masters: gentoo
    priority: 50

hardened-development
    location: /var/lib/layman/hardened-development
    masters: gentoo
    priority: 50

haskell
    location: /var/lib/layman/haskell
    masters: gentoo
    priority: 50

hasufell
    location: /var/lib/layman/hasufell
    masters: gentoo
    priority: 50

java
    location: /var/lib/layman/java
    masters: gentoo
    priority: 50

laurentb
    location: /var/lib/layman/laurentb
    masters: gentoo
    priority: 50

roslin
    location: /var/lib/layman/roslin
    masters: gentoo
    priority: 50

stuff
    location: /var/lib/layman/stuff
    sync-type: git
    sync-uri: https://github.com/istitov/stuff.git
    masters: gentoo
    priority: 50

sunrise
    location: /var/lib/layman/sunrise
    masters: gentoo
    priority: 50

toolchain
    location: /var/lib/layman/toolchain
    masters: gentoo
    priority: 50

v-fox
    location: /var/lib/layman/v-fox
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=corei7-avx -pipe -Og -g -gdwarf-4"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/easy-rsa /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=corei7-avx -pipe -Og -g -gdwarf-4"
DISTDIR="/var/distfiles"
EMERGE_DEFAULT_OPTS="--jobs=1 --autounmask --quiet-build --nospinner --verbose-conflicts --verbose-slot-rebuilds"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs binpkg-multi-instance cgroup collision-protect compressdebug config-protect-if-modified distlocks ebuild-locks fixlafiles installsources ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms split-log splitdebug strict strict-keepdir test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_GB.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu"
MAKEOPTS="-j4 -l10"
PKGDIR="/var/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl alsa amd64 apng audio audiofile avresample avx bash-completion bdf bluray bzip2 cairo caps cb cdda cdparanoia cdr cjk corefonts crypt cups curl cxx declarative detex device-mapper dga dia djvu dts dvd dvi2tty dvipdfm ebook egl exif fam ffmpeg fftw fits flac fontconfig g3dvl gallium gbm gcrypt gif gimp git glamor glib gmp gnuplot gnutls gold gpm graphics graphviz gs gstreamer gtk gtk3 hardened highlight iconv icu id3tag idn imagemagick imlib inotify iproute2 ipv6 jbig jpeg jpeg2k jpg json kde kde4 kpathsea latex lcms libffi libssh2 libtirpc libv4l luatex lvm lvm2 lzma lzo man metric mikmod mkv mms mmx mng mp3 mpeg mpg123 multilib multimedia musepack ncurses netlink nptl nut ocr odbc offensive ogg opengl openmp openvg optimization optimized-qmake opus pam pango pcre pdf pgf phonon pie png postscript private-headers pstricks pth publishers python3 qt3support qt4 raw readline samba sbsms scanner science sdl seccomp smp sna sndfile speex spell sqlite sse sse2 sse3 sse4 sse41 sse4_1 sse4_2 ssh ssl ssp ssse3 svg t1lib tesseract test theora threads tiff tls truetype udev unicode usb v4l v4l2 vaapi video vorbis vpx webp wmf x264 xanim xattr xcb xcomposite xetex xft xinerama xkb xml xmlpatterns xorg xosd xpm xrandr xtpax xv xvid xvmc xz zlib zsh-completion" ABI_X86="32 64" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon plan sheets stage words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx sse sse2 avx sse3 ssse3 sse4_1 aes avx mmxext popcnt sse3 sse4_1 sse4_2 ssse3" CURL_SSL="openssl" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="evdev synaptics" KERNEL="linux" L10N="en en-US en-GB eng" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LLVM_TARGETS="AArch64 ARM BPF X86" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-3 php5-4" POSTGRES_TARGETS="postgres10" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_4 python3_5 python3_6 python3_7" QEMU_SOFTMMU_TARGETS="x86_64 i386" RUBY_TARGETS="ruby23" SANE_BACKENDS="plustek" USERLAND="GNU" VIDEO_CARDS="intel i965 ilo" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

eroen@occam ~ $ emerge -pqv '=sys-apps/hwloc-2.0.2::gentoo'
[ebuild     U ] sys-apps/hwloc-2.0.2 [1.11.11] USE="-X -cairo -cuda -debug (-gl) -numa -pci* -plugins -static-libs -svg -xml" ABI_X86="(64) -32 (-x32)"