Bug 660762

Summary:	dev-python/astropy-1.3.3: multiple test failures
Product:	Gentoo Linux	Reporter:	Thomas Deutschmann (RETIRED) <whissi>
Component:	Current packages	Assignee:	Gentoo Astronomy project <sci-astronomy>
Status:	RESOLVED WONTFIX
Severity:	normal	CC:	treecleaner
Priority:	Normal	Keywords:	PMASKED, TESTFAILURE
Version:	unspecified
Hardware:	All
OS:	Linux
Whiteboard:
Package list:		Runtime testing required:	---
Bug Depends on:
Bug Blocks:	599846
Deadline:	2019-12-29
Attachments:	build.log

Description Thomas Deutschmann (RETIRED) gentoo-dev

2018-07-08 23:58:34 UTC

Created attachment 538884 [details]
build.log

> 
> Full Python Version: 
> 2.7.14 (default, Apr 25 2018, 18:50:15) 
> [GCC 6.4.0]
> 
> encodings: sys: ascii, locale: UTF-8, filesystem: UTF-8, unicode bits: 20
> byteorder: little
> float info: dig: 15, mant_dig: 15
> 
> Numpy: 1.10.4
> Scipy: 0.19.1
> Matplotlib: 2.2.2
> h5py: 2.7.0
> Pandas: not available
> Cython: 0.25.2
> Using Astropy options: remote_data.
> 
> rootdir: /var/tmp/portage/dev-python/astropy-1.3.3/temp/astropy-test-o26Wf3, inifile: setup.cfg
> plugins: mpl-0.8, hypothesis-3.6.0
> collected 11750 items / 3 errors
> 
> ======================================================== ERRORS ========================================================
> _____________________ ERROR collecting lib.linux-i686-2.7/astropy/io/ascii/tests/test_c_reader.py ______________________
> /usr/lib/python2.7/site-packages/_pytest/runner.py:196: in __init__
>     self.result = func()
> /usr/lib/python2.7/site-packages/_pytest/runner.py:375: in <lambda>
>     lambda: list(collector.collect()),
> /usr/lib/python2.7/site-packages/_pytest/python.py:389: in collect
>     return super(Module, self).collect()
> /usr/lib/python2.7/site-packages/_pytest/python.py:330: in collect
>     res = self.makeitem(name, obj)
> /usr/lib/python2.7/site-packages/_pytest/python.py:342: in makeitem
>     collector=self, name=name, obj=obj)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:745: in __call__
>     return self._hookexec(self, self._nonwrappers + self._wrappers, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:339: in _hookexec
>     return self._inner_hookexec(hook, methods, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:334: in <lambda>
>     _MultiCall(methods, kwargs, hook.spec_opts).execute()
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:613: in execute
>     return _wrapped_call(hook_impl.function(*args), self.execute)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:250: in _wrapped_call
>     wrap_controller.send(call_outcome)
> /usr/lib/python2.7/site-packages/_pytest/python.py:188: in pytest_pycollect_makeitem
>     res = list(collector._genfunctions(name, obj))
> /usr/lib/python2.7/site-packages/_pytest/python.py:362: in _genfunctions
>     self.ihook.pytest_generate_tests(metafunc=metafunc)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:745: in __call__
>     return self._hookexec(self, self._nonwrappers + self._wrappers, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:339: in _hookexec
>     return self._inner_hookexec(hook, methods, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:334: in <lambda>
>     _MultiCall(methods, kwargs, hook.spec_opts).execute()
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:614: in execute
>     res = hook_impl.function(*args)
> /usr/lib/python2.7/site-packages/_pytest/python.py:113: in pytest_generate_tests
>     metafunc.parametrize(*marker.args, **marker.kwargs)
> /usr/lib/python2.7/site-packages/_pytest/python.py:781: in parametrize
>     for x in argvalues]
> /usr/lib/python2.7/site-packages/_pytest/mark.py:66: in extract_from
>     warnings.warn(MARK_PARAMETERSET_UNPACKING)
> E   RemovedInPytest4Warning: Applying marks directly to parameters is deprecated, please use pytest.param(..., marks=...) instead.
> E   For more details, see: https://docs.pytest.org/en/latest/parametrize.html
> _________________________ ERROR collecting lib.linux-i686-2.7/astropy/utils/tests/test_data.py _________________________
> /usr/lib/python2.7/site-packages/_pytest/runner.py:196: in __init__
>     self.result = func()
> /usr/lib/python2.7/site-packages/_pytest/runner.py:375: in <lambda>
>     lambda: list(collector.collect()),
> /usr/lib/python2.7/site-packages/_pytest/python.py:389: in collect
>     return super(Module, self).collect()
> /usr/lib/python2.7/site-packages/_pytest/python.py:330: in collect
>     res = self.makeitem(name, obj)
> /usr/lib/python2.7/site-packages/_pytest/python.py:342: in makeitem
>     collector=self, name=name, obj=obj)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:745: in __call__
>     return self._hookexec(self, self._nonwrappers + self._wrappers, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:339: in _hookexec
>     return self._inner_hookexec(hook, methods, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:334: in <lambda>
>     _MultiCall(methods, kwargs, hook.spec_opts).execute()
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:613: in execute
>     return _wrapped_call(hook_impl.function(*args), self.execute)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:250: in _wrapped_call
>     wrap_controller.send(call_outcome)
> /usr/lib/python2.7/site-packages/_pytest/python.py:188: in pytest_pycollect_makeitem
>     res = list(collector._genfunctions(name, obj))
> /usr/lib/python2.7/site-packages/_pytest/python.py:362: in _genfunctions
>     self.ihook.pytest_generate_tests(metafunc=metafunc)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:745: in __call__
>     return self._hookexec(self, self._nonwrappers + self._wrappers, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:339: in _hookexec
>     return self._inner_hookexec(hook, methods, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:334: in <lambda>
>     _MultiCall(methods, kwargs, hook.spec_opts).execute()
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:614: in execute
>     res = hook_impl.function(*args)
> /usr/lib/python2.7/site-packages/_pytest/python.py:113: in pytest_generate_tests
>     metafunc.parametrize(*marker.args, **marker.kwargs)
> /usr/lib/python2.7/site-packages/_pytest/python.py:781: in parametrize
>     for x in argvalues]
> /usr/lib/python2.7/site-packages/_pytest/mark.py:66: in extract_from
>     warnings.warn(MARK_PARAMETERSET_UNPACKING)
> E   RemovedInPytest4Warning: Applying marks directly to parameters is deprecated, please use pytest.param(..., marks=...) instead.
> E   For more details, see: https://docs.pytest.org/en/latest/parametrize.html
> _________________________ ERROR collecting lib.linux-i686-2.7/astropy/utils/tests/test_data.py _________________________
> /usr/lib/python2.7/site-packages/_pytest/runner.py:196: in __init__
>     self.result = func()
> /usr/lib/python2.7/site-packages/_pytest/runner.py:375: in <lambda>
>     lambda: list(collector.collect()),
> /usr/lib/python2.7/site-packages/_pytest/python.py:389: in collect
>     return super(Module, self).collect()
> /usr/lib/python2.7/site-packages/_pytest/python.py:330: in collect
>     res = self.makeitem(name, obj)
> /usr/lib/python2.7/site-packages/_pytest/python.py:342: in makeitem
>     collector=self, name=name, obj=obj)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:745: in __call__
>     return self._hookexec(self, self._nonwrappers + self._wrappers, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:339: in _hookexec
>     return self._inner_hookexec(hook, methods, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:334: in <lambda>
>     _MultiCall(methods, kwargs, hook.spec_opts).execute()
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:613: in execute
>     return _wrapped_call(hook_impl.function(*args), self.execute)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:250: in _wrapped_call
>     wrap_controller.send(call_outcome)
> /usr/lib/python2.7/site-packages/_pytest/python.py:188: in pytest_pycollect_makeitem
>     res = list(collector._genfunctions(name, obj))
> /usr/lib/python2.7/site-packages/_pytest/python.py:362: in _genfunctions
>     self.ihook.pytest_generate_tests(metafunc=metafunc)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:745: in __call__
>     return self._hookexec(self, self._nonwrappers + self._wrappers, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:339: in _hookexec
>     return self._inner_hookexec(hook, methods, kwargs)
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:334: in <lambda>
>     _MultiCall(methods, kwargs, hook.spec_opts).execute()
> /usr/lib/python2.7/site-packages/_pytest/vendored_packages/pluggy.py:614: in execute
>     res = hook_impl.function(*args)
> /usr/lib/python2.7/site-packages/_pytest/python.py:113: in pytest_generate_tests
>     metafunc.parametrize(*marker.args, **marker.kwargs)
> /usr/lib/python2.7/site-packages/_pytest/python.py:781: in parametrize
>     for x in argvalues]
> /usr/lib/python2.7/site-packages/_pytest/mark.py:66: in extract_from
>     warnings.warn(MARK_PARAMETERSET_UNPACKING)
> E   RemovedInPytest4Warning: Applying marks directly to parameters is deprecated, please use pytest.param(..., marks=...) instead.
> E   For more details, see: https://docs.pytest.org/en/latest/parametrize.html
> =================================================== warnings summary ===================================================
> None
>   [pytest] section in setup.cfg files is deprecated, use [tool:pytest] instead.
> 
> -- Docs: http://doc.pytest.org/en/latest/warnings.html
> !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Interrupted: 3 errors during collection !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
> ========================================= 1 warnings, 3 error in 66.01 seconds =========================================
>  * ERROR: dev-python/astropy-1.3.3::gentoo failed (test phase):
>  *   (no error message)


Portage 2.3.40 (python 3.6.5-final-0, default/linux/x86/17.0, gcc-7.3.0, glibc-2.26-r7, 4.14.52-gentoo i686)
=================================================================
System uname: Linux-4.14.52-gentoo-i686-Intel-R-_Core-TM-_i7-3770K_CPU_@_3.50GHz-with-gentoo-2.4.1
KiB Mem:     3107600 total,    778568 free
KiB Swap:     488276 total,    488276 free
Timestamp of repository gentoo: Sun, 08 Jul 2018 19:44:24 +0000
Head commit of repository gentoo: 3e71460c2f988d8821b6d4c9efae2cc5999a4820

sh bash 4.4_p12
ld GNU ld (Gentoo 2.30 p2) 2.30.0
app-shells/bash:          4.4_p12::gentoo
dev-lang/perl:            5.24.3-r1::gentoo
dev-lang/python:          2.7.14-r1::gentoo, 3.6.5::gentoo
dev-util/cmake:           3.9.6::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.4.1-r2::gentoo
sys-apps/openrc:          0.34.11::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.15.1-r2::gentoo
sys-devel/binutils:       2.30-r2::gentoo
sys-devel/gcc:            7.3.0-r3::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.13::gentoo (virtual/os-headers)
sys-libs/glibc:           2.26-r7::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: git
    sync-uri: https://github.com/gentoo-mirror/gentoo.git
    priority: -1000

ABI="x86"
ABI_X86="32"
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="* -@EULA"
ACCEPT_PROPERTIES="*"
ACCEPT_RESTRICT="*"
ARCH="x86"
BROOT=""
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=pentium4m -mtune=pentium4m"
CHOST="i686-pc-linux-gnu"
CHOST_x86="i686-pc-linux-gnu"
COLLISION_IGNORE="/lib/modules/* *.py[co] *$py.class */dropin.cache"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CPU_FLAGS_X86="mmx mmxext sse sse2"
CXXFLAGS="-O2 -pipe -march=pentium4m -mtune=pentium4m"
DEFAULT_ABI="x86"
EDITOR="/usr/bin/mcedit"
ELIBC="glibc"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
EPREFIX=""
EROOT="/"
ESYSROOT="/"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-logs cgroup config-protect-if-modified distlocks downgrade-backup ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -march=i686 -pipe"
GCC_SPECS=""
GRUB_PLATFORMS="efi-32 pc"
GSETTINGS_BACKEND="dconf"
HOME="/root"
INFOPATH="/usr/share/gcc-data/i686-pc-linux-gnu/7.3.0/info:/usr/share/binutils-data/i686-pc-linux-gnu/2.30/info:/usr/share/info"
INPUT_DEVICES="libinput keyboard mouse"
IUSE_IMPLICIT="abi_x86_32 prefix prefix-chain prefix-guest"
KERNEL="linux"
L10N="en en-US de de-DE"
LANG="en_US.UTF-8"
LC_ALL="en_US.UTF-8"
LC_MESSAGES="C"
LC_PAPER="de_DE.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LIBDIR_x86="lib"
LINGUAS="en de"
LOGNAME="root"
MAIL="/var/mail/root"
MAKEOPTS="--jobs 5 --load-average 7.95"
MULTILIB_ABIS="x86"
NOCOLOR="true"
OFFICE_IMPLEMENTATION="libreoffice"
OLDPWD="/root"
OPENCL_PROFILE="mesa"
OPENGL_PROFILE="xorg-x11"
PAGER="/usr/bin/less"
PATH="/usr/i686-pc-linux-gnu/gcc-bin/7.3.0:/usr/lib/llvm/5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin"
PHP_TARGETS="php5-6 php7-0"
POSTGRES_TARGETS="postgres9_5 postgres10"
PWD="/tmp/stable"
PYTHONDONTWRITEBYTECODE="1"
PYTHON_SINGLE_TARGET="python3_6"
PYTHON_TARGETS="python2_7 python3_6"
QT_GRAPHICSSYSTEM="raster"
ROOT="/"
ROOTPATH="/usr/i686-pc-linux-gnu/gcc-bin/7.3.0:/usr/lib/llvm/5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin"
RUBY_TARGETS="ruby22 ruby23"
SHELL="/bin/bash"
SHLVL="2"
SSH_TTY="/dev/pts/0"
SYSROOT="/"
TERM="tmux-256color"
TMUX="/tmp/tmux-0/default,5402,0"
TMUX_PANE="%2"
TWISTED_DISABLE_WRITING_OF_PLUGIN_CACHE="1"
USER="root"
USERLAND="GNU"
VIDEO_CARDS="vmware"