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Bug 638494

Summary: sci-libs/libdap-3.18.1 : configure: error: Cannot determine DODS XDR integer sizes
Product: Gentoo Linux Reporter: Toralf Förster <toralf>
Component: Current packagesAssignee: Sci-geo Project <sci-geosciences>
Status: RESOLVED FIXED    
Severity: normal    
Priority: Normal    
Version: unspecified   
Hardware: All   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---
Attachments: emerge-info.txt
emerge-history.txt
environment
etc.portage.tbz2
logs.tbz2
sci-libs:libdap-3.18.1:20171122-122139.log
temp.tbz2

Description Toralf Förster gentoo-dev 2017-11-22 18:16:44 UTC
checking for xdr_uint in -lc... no
checking for xdr_u_int in -lc... no
configure: error: Cannot determine DODS XDR integer sizes

!!! Please attach the following file when seeking support:
!!! /var/tmp/portage/sci-libs/libdap-3.18.1/work/libdap-3.18.1/config.log

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.0-systemd_libressl_20171120-180901

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-7.2.0 *

Available Python interpreters, in order of preference:
  [1]   python3.4
  [2]   python3.6 (fallback)
  [3]   python2.7 (fallback)
Available Ruby profiles:
  [1]   ruby22 (with Rubygems) *



emerge -qpv sci-libs/libdap
[ebuild  N    ] sci-libs/libdap-3.18.1  USE="-static-libs {-test}"
Comment 1 Toralf Förster gentoo-dev 2017-11-22 18:16:47 UTC
Created attachment 505730 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2017-11-22 18:16:50 UTC
Created attachment 505732 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2017-11-22 18:16:53 UTC
Created attachment 505734 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2017-11-22 18:16:55 UTC
Created attachment 505736 [details]
etc.portage.tbz2
Comment 5 Toralf Förster gentoo-dev 2017-11-22 18:16:58 UTC
Created attachment 505738 [details]
logs.tbz2
Comment 6 Toralf Förster gentoo-dev 2017-11-22 18:17:01 UTC
Created attachment 505740 [details]
sci-libs:libdap-3.18.1:20171122-122139.log
Comment 7 Toralf Förster gentoo-dev 2017-11-22 18:17:04 UTC
Created attachment 505742 [details]
temp.tbz2
Comment 8 Gabriel David 2020-01-05 14:27:48 UTC
I don't get why this hasn't gotten enough attention. I also have this bug(I need this library for Origin on Lutris)

Here's my emerge --info:

Portage 2.3.79 (python 3.6.9-final-0, default/linux/amd64/17.1, gcc-9.2.0, glibc-2.29-r7, 4.19.86-gentoo x86_64)
=================================================================
System uname: Linux-4.19.86-gentoo-x86_64-AMD_Ryzen_3_1200_Quad-Core_Processor-with-gentoo-2.6
KiB Mem:     8179892 total,   3328924 free
KiB Swap:    5242876 total,   5242876 free
Timestamp of repository gentoo: Sat, 04 Jan 2020 00:45:01 +0000
Head commit of repository gentoo: 371398bf74fa53a6ba958e029aa966c963072d58
sh bash 4.4_p23-r1
ld GNU ld (Gentoo 2.32 p2) 2.32.0
ccache version 3.7.4 [enabled]
app-shells/bash:          4.4_p23-r1::gentoo
dev-lang/perl:            5.30.1::gentoo
dev-lang/python:          2.7.17::gentoo, 3.6.9::gentoo
dev-util/ccache:          3.7.4::gentoo
dev-util/cmake:           3.14.6::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/openrc:          0.41.2::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.16.1-r1::gentoo
sys-devel/binutils:       2.32-r1::gentoo
sys-devel/gcc:            9.2.0-r2::gentoo
sys-devel/gcc-config:     2.1::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 4.19::gentoo (virtual/os-headers)
sys-libs/glibc:           2.29-r7::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-metamanifest: yes
    sync-rsync-verify-max-age: 24
    sync-rsync-extra-opts: 

Installed sets: @origin, @steam
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="@FREE"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=znver1 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=znver1 -O2 -pipe"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-march=znver1 -O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs ccache config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=znver1 -O2 -pipe"
GENTOO_MIRRORS="https://gentoo.ussg.indiana.edu/ http://gentoo.ussg.indiana.edu/ https://gentoo.osuosl.org/ http://gentoo.osuosl.org/ http://gentoo.mirrors.pair.com/ https://mirrors.rit.edu/gentoo/ https://mirror.sjc02.svwh.net/gentoo/ http://mirror.sjc02.svwh.net/gentoo/ http://gentoo.mirrors.tds.net/gentoo http://mirror.lug.udel.edu/pub/gentoo/ http://gentoo.cs.utah.edu/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j4"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X acl amd64 audiofile berkdb bluetooth bzip2 cli crypt cxx dbus dri elogind fortran gdbm gtk iconv ipv6 jpeg lame libtirpc multilib ncurses nls nptl nvidia opengl openmp pam pcre png pulseaudio readline seccomp split-usr ssl tcpd udev unicode vdpau vorbis vulkan xattr xvmc zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="libinput keyboard mouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" NETBEANS_MODULES="apisupport cnd groovy gsf harness ide identity j2ee java mobility nb php profiler soa visualweb webcommon websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" RUBY_TARGETS="ruby24 ruby25" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 9 Larry the Git Cow gentoo-dev 2021-12-29 09:03:28 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5ac778139dcffdf9853020a8938b75e973995896

commit 5ac778139dcffdf9853020a8938b75e973995896
Author:     Sam James <sam@gentoo.org>
AuthorDate: 2021-12-29 09:03:01 +0000
Commit:     Sam James <sam@gentoo.org>
CommitDate: 2021-12-29 09:03:22 +0000

    sci-libs/libdap: add 3.20.9
    
    We were a bit behind in Gentoo so hopefully the linked bug
    is fixed too. Seems fine for me.
    
    Closes: https://bugs.gentoo.org/638494
    Signed-off-by: Sam James <sam@gentoo.org>

 sci-libs/libdap/Manifest                           |  1 +
 .../files/libdap-3.20.9-disable-net-tests.patch    | 34 ++++++++++++++
 sci-libs/libdap/libdap-3.20.9.ebuild               | 52 ++++++++++++++++++++++
 3 files changed, 87 insertions(+)