Bug 613296 – dev-java/saxpath-1.0-r3 - sandbox violation in /usr/lib64/python3.5/site-packages/portage/__pycache__/__init__.cpython-35.pyc.139874701113264 by /usr/bin/python3.5 -E /usr/lib/python-exec/python3.5/depend-java-query --get-lowest [...]

• Product: Gentoo Linux
• Status: RESOLVED NEEDINFO

[Description Paolo Pedroni 2017-03-20 09:31:58 UTC]

Created attachment 467640 [details]
sandbox-25868.log (Access Violation Summary)

>>> Compiling source in /var/tmp/portage/dev-java/saxpath-1.0-r3/work ...
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/__init__.cpython-35.pyc.139874701113264
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/proxy/__pycache__/__init__.cpython-35.pyc.13987469988349
6
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/proxy/__pycache__/lazyimport.cpython-35.pyc.139874699883
632
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/proxy/__pycache__/objectproxy.cpython-35.pyc.13987469988
3768
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/const.cpython-35.pyc.139874700711216
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/dep/__pycache__/__init__.cpython-35.pyc.139874700219504
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/eapi.cpython-35.pyc.139874700712112
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/exception.cpython-35.pyc.139874700712240
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/localization.cpython-35.pyc.139874700349896
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/versions.cpython-35.pyc.139874700712752
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/cache/__pycache__/__init__.cpython-35.pyc.13987470031384
8
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/cache/__pycache__/mappings.cpython-35.pyc.13987470031398
4
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/__init__.cpython-35.pyc.140206438012848
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/proxy/__pycache__/__init__.cpython-35.pyc.14020643678308
0
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/proxy/__pycache__/lazyimport.cpython-35.pyc.140206436783
216
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/proxy/__pycache__/objectproxy.cpython-35.pyc.14020643678
3352
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/const.cpython-35.pyc.140206437610800
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/dep/__pycache__/__init__.cpython-35.pyc.140206437119088
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/eapi.cpython-35.pyc.140206437611696
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/exception.cpython-35.pyc.140206437611824
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/localization.cpython-35.pyc.140206437249480
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/__pycache__/versions.cpython-35.pyc.140206437612336
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/cache/__pycache__/__init__.cpython-35.pyc.140206437213432
 * ACCESS DENIED:  open_wr:      /usr/lib64/python3.5/site-packages/portage/cache/__pycache__/mappings.cpython-35.pyc.140206437213568
 * Compiling ...
warning: [options] bootstrap class path not set in conjunction with -source 1.6
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
1 warning

#  emerge --info =dev-java/saxpath-1.0-r3
Portage 2.3.3 (python 3.5.3-final-0, default/linux/amd64/13.0/desktop/plasma/systemd, gcc-5.4.0, glibc-2.23-r3, 4.9.6-gentoo-r1 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.9.6-gentoo-r1-x86_64-Intel-R-_Core-TM-_i7-2600_CPU_@_3.40GHz-with-gentoo-2.3
KiB Mem:    16396056 total,   6025004 free
KiB Swap:    8171516 total,   8171516 free
Timestamp of repository gentoo: Mon, 20 Mar 2017 08:15:01 +0000
sh dash 0.5.8.2
ld GNU gold (Gentoo 2.26.1 p1.0 2.26.1) 1.11
distcc 3.2rc1 x86_64-pc-linux-gnu [enabled]
ccache version 3.2.4 [disabled]
app-shells/bash:          4.3_p48-r1::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.24.1-r1::gentoo
dev-lang/python:          2.7.13::gentoo, 3.5.3::gentoo
dev-util/ccache:          3.2.4::gentoo
dev-util/cmake:           3.7.2::gentoo
dev-util/pkgconfig:       0.28-r2::gentoo
sys-apps/baselayout:      2.3::gentoo
sys-apps/sandbox:         2.10-r3::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69::gentoo
sys-devel/automake:       1.11.6-r1::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.26.1::gentoo
sys-devel/gcc:            5.4.0-r3::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.4::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r3::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.europe.gentoo.org/gentoo-portage
    priority: -1000

x-portage
    location: /usr/local/portage
    masters: gentoo
    priority: 0

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=sandybridge -msahf --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=8192 -flto=8 -fuse-linker-plugin -floop-nest-optimize -ftree-loop-distribution -fgraphite-identity -ftree-vectorize"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.0/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=sandybridge -msahf --param l1-cache-size=32 --param l1-cache-line-size=64 --param l2-cache-size=8192 -flto=8 -fuse-linker-plugin -floop-nest-optimize -ftree-loop-distribution -fgraphite-identity -ftree-vectorize"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--keep-going y --with-bdeps y"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs cgroup compress-build-logs config-protect-if-modified distcc distlocks ebuild-locks ipc-sandbox merge-sync news parallel-fetch protect-owned sandbox sfperms split-elog split-log strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://tux.rainside.sk/gentoo/ http://mirror.leaseweb.com/gentoo/ http://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/"
LANG="it_IT.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu -Wl,--sort-common -flto=8 -fuse-linker-plugin -floop-nest-optimize -ftree-loop-distribution -fgraphite-identity -ftree-vectorize"
MAKEOPTS="-j11 -l8"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac aalib acl acpi adns alsa amd64 ao audiofile bash-completion bluetooth branding bzip2 cairo caps cdda cddb cdparanoia cdr cli cracklib crypt css cups curl cxx dbus declarative dga djvu dri dts dvd dvdr emboss encode exif expat fbcon ffmpeg fftw firefox flac fontconfig foomaticdb fortran ftp gd gdbm geoip gif gimp glamor gmp gnutls gphoto2 gpm graphviz gtk handbook iconv icu idn imagemagick imlib ipv6 java javascript jbig jpeg jpeg2k kde kipi kwallet lame lcms libass libcaca libnotify libsamplerate lm_sensors lua lzma lzo mad mmap mng modules mp3 mp4 mpeg mplayer multilib musicbrainz ncurses nls nptl nsplugin offensive ogg openal openexr opengl openmp pam pango pcre pdf phonon plasma png policykit postscript ppds pulseaudio qml qt3support qt4 qt5 rdesktop readline recode samba sctp sdl seccomp session sndfile sockets speex spell sqlite ssl startup-notification subversion svg symlink syslog systemd sysvipc taglib theora threads tidy tiff truetype udev udisks unicode upower usb vaapi vcd vdpau vim-syntax vnc vorbis wayland widgets win32codecs wmf wxwidgets x264 xattr xcb xcomposite xine xinerama xml xpm xscreensaver xv xvid yahoo zlib" ABI_X86="64" ALSA_CARDS="hda-intel virmidi" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="kodak ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="gnutls" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="pc" INPUT_DEVICES="evdev" KERNEL="linux" L10N="it en" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="nlpsolver" LINGUAS="it it_IT" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_5 pypy pypy3" RUBY_TARGETS="ruby21" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

# emerge -1pqv =dev-java/saxpath-1.0-r3

[ebuild     U ] dev-java/saxpath-1.0-r3 [1.0-r2] USE="-doc -source (-test%*)"

[Comment 1 Paolo Pedroni 2017-03-20 09:33:03 UTC]

Created attachment 467642 [details]
saxpath-1.0-r3-20170320-091141.log.gz

[Comment 2 Patrice Clement (RETIRED) 2018-04-10 21:46:25 UTC]

Hi Paolo

I can't reproduce this error. Can you please reopen this bug if you still encounter it? Thanks!

[Comment 3 James Le Cuirot 2018-04-10 22:25:13 UTC]

This won't be specific to this package or even Java. Something has invalidated the Python cache for Portage and I wouldn't expect you to be able to emerge anything at this point. You would have to disable the sandbox and remerge Portage.

[Comment 4 Paolo Pedroni 2018-04-11 10:00:33 UTC]

(In reply to Patrice Clement from comment #2)
> Hi Paolo
> 
> I can't reproduce this error. Can you please reopen this bug if you still
> encounter it? Thanks!

I've since removed both python3.5 and the affected package from my system. You are free to close this bug as you see fit...