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Bug 588018

Summary: gnome-extra/gnome-shell-extensions-3.20.1 - applications menu disappeared
Product: Gentoo Linux Reporter: Juergen Rose <rose>
Component: Current packagesAssignee: Gentoo Linux Gnome Desktop Team <gnome>
Status: RESOLVED NEEDINFO    
Severity: normal    
Priority: Normal    
Version: unspecified   
Hardware: All   
OS: Linux   
Whiteboard:
Package list:
Runtime testing required: ---
Attachments: Output from gnome-tweak-tool
Output of glxinfo

Description Juergen Rose 2016-07-04 19:42:48 UTC
Some days ago after the installation of some gnome-3.20 packlages at one system the Application menu disappeared. I can't enable it with the gnome-tweak-tool-3.20.1/ The entry Extensions->Application menu has an exclamation mark. It can not be switched on or off or removed.

The Frippery apllications menu works but I prefer the default applications menu.
Reemerging of of gnome-shell-extensions does not help.  Any hint is appreciated.


root@condor:/root(3)# emerge --info =gnome-shell-extensions-3.20.1
Portage 2.3.0 (python 2.7.11-final-0, default/linux/amd64/13.0/desktop, gcc-5.3.0, glibc-2.23-r2, 4.6.3-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.6.3-gentoo-x86_64-Intel-R-_Core-TM-2_CPU_6600_@_2.40GHz-with-gentoo-2.2
KiB Mem:     7068504 total,   3391492 free
KiB Swap:   25173848 total,  25173848 free
Timestamp of repository gentoo: Mon, 04 Jul 2016 16:30:01 +0000
sh bash 4.3_p46
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
distcc 3.2rc1 x86_64-pc-linux-gnu [disabled]
app-shells/bash:          4.3_p46::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.24.0-r1::gentoo
dev-lang/python:          2.7.11-r2::gentoo, 3.4.4::gentoo, 3.5.1-r3::gentoo
dev-util/cmake:           3.5.2-r1::gentoo
dev-util/pkgconfig:       0.29.1::gentoo
sys-apps/baselayout:      2.2-r1::gentoo
sys-apps/openrc:          0.21.1::gentoo
sys-apps/sandbox:         2.10-r2::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r2::gentoo
sys-devel/automake:       1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.9.3::gentoo, 5.3.0::gentoo, 5.4.0::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r2::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.6::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r2::gentoo
Repositories:

gentoo
    location: /usr/portage_condor
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

local
    location: /usr/local/portage
    masters: gentoo
    priority: 0

g-cpan
    location: /var/lib/cpan
    masters: gentoo
    priority: 1

sage-on-gentoo
    location: /var/lib/layman/sage-on-gentoo
    masters: gentoo science
    priority: 50

science
    location: /var/lib/layman/science
    masters: gentoo
    priority: 50

sunrise
    location: /var/lib/layman/sunrise
    masters: gentoo
    priority: 50

x11
    location: /var/lib/layman/x11
    masters: gentoo
    priority: 50

Installed sets: @system
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-11.x cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA NVIDIA-CUDA Nero-AAC-EULA GIMPS"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.0/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe"
GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ rsync://ftp.fi.muni.cz/pub/linux/gentoo ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo rsync://gd.tuwien.ac.at/opsys/linux/gentoo ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo http://gentoo.oregonstate.edu"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages/"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="64bit R X Xaw3d a52 aac accessibility acl acpi admin afs alsa amd64 amr ao apache2 apng applet archive armadillo arpack asf aspell assistant atlas audacious audiofile aufs automap automount barcode bash-completion berkdb blas blast bluetooth bluray boost branding btrfs bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cgi chm cilk cli cmake collada consolekit contrib cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia digitalradio djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples excel exif expat extensions extra extras faac faad fam fbcon fbcondecor ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx ftp fuse gcj gd gdal gdbm gedit geoip geolocation geos gfortran gif gimp git glade glamor glib glpk gml gmp gnome gnome-keyring gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gsm gstreamer gtk gtk3 gudev guile hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 irda ithreads jadetex java jbig jit john jpeg jpeg2k kate kde kdepim kdrive kerberos keymap kpathsea kvm ladspa lame lapack latex lcms ldap lensfun libffi libgda libkms libnotify libsamplerate lirc live lm_sensors lua lzma lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mmx mmxext mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mpi-threads mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking nfs nls nntp nptl nsplugin ntfs ntp numpy obex objc ocaml ocr octave odbc ofa ogdi ogg opencl opencv openexr opengl openmp openvg pam pango pcre pda pdf pdl2 perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds preview-latex proj projectm pstricks pulseaudio python q16 q32 qemu qhull qt3support qt4 qt5 quicktime raw readline reiserfs reports rle romio rpc rrdcgi rrdtool rtlsdr sage samba sasl schroedinger science sdk sdl seccomp secure-delete semantic-desktop server session shout sip slang slp smart smbclient smp sms sndfile snmp soap sockets sound soup sox speex spell sql sqlite sse sse2 ssl startup-notification stlport subtitles subversion sudo suexec svg svm swig systemd szip t1lib tbb tcl tcpd tex tex4ht texmacs theora thesaurus threads thunderbird tidy tiff tk tools truetype udev udisks unicode upower usb utempter v4l v4l2 vaapi vala valgrind vdpau video vim-syntax virt-network virtualbox visio vorbis vpx vtk wav wayland webdav webdav-serf webkit wmf wxwidgets x264 xa xattr xcb xetex xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zsh-completion zvbi" ABI_X86="64" ALSA_CARDS="intel8x0" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" APACHE2_MPMS="worker" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog sensors thermal" CPU_FLAGS_X86="mmx mmxext sse sse2 sse3 ssse3" CURL_SSL="nss" DVB_CARDS="tda10045 tda10046lifeview" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" L10N="de en fr ru" LCD_DEVICES="cfontz hd44780 mtxorb ncurses X lcd2usb lcdlinux png usblcd SureElec" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de en fr ru" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="nouveau radeon" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

=================================================================
                        Package Settings
=================================================================

gnome-extra/gnome-shell-extensions-3.20.1::local was built with the following:
USE="examples" ABI_X86="64"
Comment 1 Juergen Rose 2016-07-04 20:06:18 UTC
I see the same behaviour for a second user. (BTW, the menu entry "switch user" does not work, I have to log off an login.) After switching back to user rose my selected background and my selected panel favorites disappeared. Only the default applications (firefox, evolution, rhythmbox, shotwell and files) are shown.
Comment 2 Juergen Rose 2016-07-04 20:21:26 UTC
Even If I create a new user "testappmenu" and login as "testappmenu" I see this behaviour.

If I start gnome-tweak-tool, I see that all extensions are enabled as default (with except of the Application menu)., see the attached image
Comment 3 Juergen Rose 2016-07-04 20:24:47 UTC
Created attachment 439724 [details]
Output from gnome-tweak-tool
Comment 4 Juergen Rose 2016-07-04 20:41:44 UTC
Removing of gnome-shell-frippery did not help either.
Comment 5 Juergen Rose 2016-07-07 16:08:36 UTC
Reeinstalling all glib, gtk and gnome packages:

emerge -v1 --keep-going `qlist -IC glib gtk gnome` 

did not help either. The application menu is not accessible.
Comment 6 Juergen Rose 2016-07-28 16:38:37 UTC
I am still missing the application menu at this system. And gnome-tweak-tool shows the exclamation mark for the "Application menu". Is there anything else, what I could check?
Comment 7 Juergen Rose 2016-07-30 18:33:56 UTC
I am also missing the Activities Menu. If I disable the "Applications menu" on other systems I get at least an Activities menu.
At this system (condor) the panel starts with Places.
Comment 8 Juergen Rose 2016-07-30 20:21:15 UTC
Could it be, that this issue is a problem with the radeon driver?

root@condor:/root(3)# lspci | grep -i vga
01:00.0 VGA compatible controller: Advanced Micro Devices, Inc. [AMD/ATI] Pitcairn PRO [Radeon HD 7850 / R7 265 / R9 270 1024SP]

root@condor:/root(6)# qlist -Iv video-ati
x11-drivers/xf86-video-ati-7.7.0



rose_test@condor /home_condor/rose_test $ xrandr 
Screen 0: minimum 320 x 200, current 2560 x 1440, maximum 16384 x 16384
DisplayPort-0 connected primary 2560x1440+0+0 527mm x 296mm
   2560x1440     59.95*+
   2048x1152     59.90  
   1920x1200     59.88  
   1920x1080     60.00    50.00    59.94    24.00    23.98  
   1920x1080i    60.00    50.00    59.94  
   1600x1200     60.00  
   1680x1050     59.95  
   1280x1024     75.02    60.02  
   1280x800      59.81  
   1152x864      75.00  
   1280x720      60.00    50.00    59.94  
   1024x768      75.03    60.00  
   800x600       75.00    60.32  
   720x576       50.00  
   720x576i      50.00  
   720x480       60.00    59.94  
   720x480i      60.00    59.94  
   640x480       75.00    60.00    59.94  
   720x400       70.08  
HDMI-0 disconnected
DVI-0 disconnected
DVI-1 disconnected


rose_test@condor /home_condor/rose_test $ grep EE -U5 /var/log/Xorg.0.log
--
[ 11229.163] 	compiled for 1.18.4, module version = 1.0.0
[ 11229.163] 	ABI class: X.Org ANSI C Emulation, version 0.4
[ 11229.163] (II) glamor: OpenGL accelerated X.org driver based.
[ 11229.280] (II) glamor: EGL version 1.4 (DRI2):
[ 11229.281] EGL_MESA_drm_image required.
[ 11229.281] (EE) RADEON(0): glamor detected, failed to initialize EGL.
[ 11229.281] (II) Loading sub module "shadow"
[ 11229.281] (II) LoadModule: "shadow"
[ 11229.281] (II) Loading /usr/lib64/xorg/modules/libshadow.so
[ 11229.281] (II) Module shadow: vendor="X.Org Foundation"
[ 11229.281] 	compiled for 1.18.4, module version = 1.1.0
--
[ 11229.355] (==) RADEON(0): DPMS enabled
[ 11229.355] (==) RADEON(0): Silken mouse enabled
[ 11229.355] (II) RADEON(0): RandR 1.2 enabled, ignore the following RandR disabled message.
[ 11229.356] (--) RandR disabled
[ 11229.356] (II) AIGLX: Screen 0 is not DRI2 capable
[ 11229.356] (EE) AIGLX: reverting to software rendering
[ 11229.365] (II) AIGLX: enabled GLX_MESA_copy_sub_buffer
[ 11229.366] (II) AIGLX: Loaded and initialized swrast
[ 11229.366] (II) GLX: Initialized DRISWRAST GL provider for screen 0
[ 11229.366] (II) RADEON(0): Setting screen physical size to 677 x 381
[ 11229.543] (II) config/udev: Adding input device Power Button (/dev/input/even
Comment 9 Juergen Rose 2016-07-30 20:33:43 UTC
Gnome-controll-center says:

Gnome Version 3.20.2

Processor: Intel® Core™2 CPU 6600 @ 2.40GHz × 2 
Graphic:   Gallium 0.4 on llvmpipe (LLVM 3.8, 128 bits)
Comment 10 Juergen Rose 2016-07-30 21:09:28 UTC
glxgears shows between 189 and 244 FPS.
Comment 11 Juergen Rose 2016-07-30 21:15:53 UTC
Created attachment 442022 [details]
Output of glxinfo
Comment 12 Juergen Rose 2016-07-31 04:43:36 UTC
I have set VIDEO_CARDS="radeon radeonsi" and reemerge all x11-drivers and mesa.
'gnome-control-center' says "Graphics: Gallium 0.4 on AMD PITCAIRN (DRM 2.45.0 / 4.7.0-gentoo, LLVM 3.8.1)". It seems, that there are no relevant errors in /var/log/Xorg.0.log:
root@condor:/root(7)# grep EE /var/log/Xorg.0.log
        (WW) warning, (EE) error, (NI) not implemented, (??) unknown.
[   728.751] (EE) Failed to load module "fbdev" (module does not exist, 0)
[   728.751] (EE) Failed to load module "vesa" (module does not exist, 0)

But nevertheless there is still no "Activities" menu.
Comment 13 Pacho Ramos gentoo-dev 2016-07-31 08:31:23 UTC
I cannot reproduce this problem at all with either my account or with a new / fresh account created to test this :/
Comment 14 Juergen Rose 2016-08-04 15:22:39 UTC
I have this error also with gnome-classic.

'journalct -xb' shows several gnome-shell related warnings or  Theme parsing errors, respectively:

Aug 04 15:52:19 condor gnome-session-binary[31613]: WARNING: Could not parse desktop file baloo_file.desktop or it references a not found TryExec binary
Aug 04 15:52:19 condor gnome-session[31613]: (gnome-session-check-accelerated:31818): Gtk-WARNING **: Theme parsing error: gtk.css:109:13: The :insensitive pseudo-class is deprecated. Use :disabled instead.
Aug 04 15:52:19 condor gnome-session[31613]: (gnome-session-check-accelerated:31818): Gtk-WARNING **: Theme parsing error: gtk.css:110:19: The '-gtk-image-effect' property has been renamed to '-gtk-icon-effect'
Aug 04 15:52:19 condor gnome-session[31613]: (gnome-session-check-accelerated:31818): Gtk-WARNING **: Theme parsing error: gtk.css:115:29: The :prelight pseudo-class is deprecated. Use :hover instead.
Aug 04 15:52:19 condor gnome-session[31613]: (gnome-session-check-accelerated:31818): Gtk-WARNING **: Theme parsing error: gtk.css:121:32: The :insensitive pseudo-class is deprecated. Use :disabled instead.
Aug 04 15:52:19 condor gnome-session[31613]: (gnome-session-check-accelerated:31818): Gtk-WARNING **: Theme parsing error: gtk.css:148:18: The :insensitive pseudo-class is deprecated. Use :disabled instead.
Aug 04 15:52:19 condor gnome-session[31613]: (gnome-session-check-accelerated:31818): Gtk-WARNING **: Theme parsing error: gtk.css:150:20: The :insensitive pseudo-class is deprecated. Use :disabled instead.
...
Aug 04 15:52:19 condor gnome-session[31613]: (gnome-session-check-accelerated:31818): Gtk-WARNING **: Theme parsing error: gtk.css:353:165: The :insensitive pseudo-class is deprecated. Use :disabled instead.
Aug 04 15:52:19 condor org.a11y.atspi.Registry[31842]: SpiRegistry daemon is running with well-known name - org.a11y.atspi.Registry
Aug 04 15:52:19 condor org.a11y.Bus[31813]: ** (process:31837): WARNING **: Failed to register client: GDBus.Error:org.freedesktop.DBus.Error.ServiceUnknown: The name org.gnome.SessionManager was not provided by any .service files
Aug 04 15:52:19 condor gnome-keyring-daemon[31611]: Gkm: using old keyring directory: /home/rose/.gnome2/keyrings
Aug 04 15:52:20 condor gnome-session[31613]: (gnome-session-check-accelerated:31818): Gtk-WARNING **: Theme parsing error: gtk.css:353:224: The :insensitive pseudo-class is deprecated. Use :disabled instead.
...
Aug 04 15:52:23 condor rtkit-daemon[31905]: Supervising 4 threads of 1 processes of 1 users.
Aug 04 15:52:23 condor dbus[2184]: [system] Activating via systemd: service name='org.bluez' unit='dbus-org.bluez.service'
Aug 04 15:52:23 condor dbus[2184]: [system] Activation via systemd failed for unit 'dbus-org.bluez.service': Unit dbus-org.bluez.service not found.
Aug 04 15:52:23 condor pulseaudio[31904]: [pulseaudio] bluez5-util.c: GetManagedObjects() failed: org.freedesktop.systemd1.NoSuchUnit: Unit dbus-org.bluez.service not found.
Aug 04 15:52:23 condor org.gnome.Shell.desktop[31863]: (gnome-shell:31863): Gtk-WARNING **: Theme parsing error: gtk.css:68:35: The style property GtkButton:child-displacement-x is deprecated and shouldn't be used anymore. It will be removed in a future version
...
Comment 15 Gilles Dartiguelongue (RETIRED) gentoo-dev 2016-09-11 20:33:08 UTC
What's the popup on the exclamation sign saying ?
"This extensions does not work with this version of gnome-shell." ?