Bug 576158 – dev-python/numpy-1.10.4 fails tests

• Product: Gentoo Linux
• Status: RESOLVED TEST-REQUEST

[Description Patrick Lauer 2016-03-01 19:59:01 UTC]

test_matlib.test_repmat ... ok

======================================================================
ERROR: test_big_arrays (test_io.TestSavezLoad)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/numpy-1.10.4/work/numpy-1.10.4-python2_7/build/test/lib/numpy/testing/decorators.py", line 146, in skipper_func
    return f(*args, **kwargs)
  File "/var/tmp/portage/dev-python/numpy-1.10.4/work/numpy-1.10.4-python2_7/build/test/lib/numpy/lib/tests/test_io.py", line 199, in test_big_arrays
    np.savez(tmp, a=a)
  File "/var/tmp/portage/dev-python/numpy-1.10.4/work/numpy-1.10.4-python2_7/build/test/lib/numpy/lib/npyio.py", line 574, in savez
    _savez(file, args, kwds, False)
  File "/var/tmp/portage/dev-python/numpy-1.10.4/work/numpy-1.10.4-python2_7/build/test/lib/numpy/lib/npyio.py", line 639, in _savez
    pickle_kwargs=pickle_kwargs)
  File "/var/tmp/portage/dev-python/numpy-1.10.4/work/numpy-1.10.4-python2_7/build/test/lib/numpy/lib/format.py", line 585, in write_array
    array.tofile(fp)
IOError: 2147583648 requested and 2111877040 written

----------------------------------------------------------------------
Ran 6152 tests in 108.217s

FAILED (KNOWNFAIL=3, SKIP=1, errors=1)
Running unit tests for numpy
NumPy version 1.10.4
NumPy relaxed strides checking option: False
NumPy is installed in /var/tmp/portage/dev-python/numpy-1.10.4/work/numpy-1.10.4-python2_7/build/test/lib/numpy
Python version 2.7.11 (default, Feb 14 2016, 18:24:47) [GCC 5.3.0]
nose version 1.3.7
 * ERROR: dev-python/numpy-1.10.4::gentoo failed (test phase):
 *   Tests fail with python2.7

Portage 2.2.27 (python 3.4.3-final-0, default/linux/amd64/13.0, gcc-5.3.0, glibc-2.22-r2, 4.4.0-gentoo-r1 x86_64)
=================================================================
System uname: Linux-4.4.0-gentoo-r1-x86_64-Intel-R-_Core-TM-_i7-5600U_CPU_@_2.60GHz-with-gentoo-2.2
KiB Mem:    16125132 total,   3584248 free
KiB Swap:          0 total,         0 free
sh bash 4.3_p42-r2
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
app-shells/bash:          4.3_p42-r2::gentoo
dev-lang/perl:            5.22.1::gentoo
dev-lang/python:          2.7.11-r2::gentoo, 3.4.3-r8::gentoo, 3.5.1-r2::gentoo
dev-util/pkgconfig:       0.29::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.20.5::gentoo
sys-apps/sandbox:         2.10-r1::gentoo
sys-devel/autoconf:       2.69-r1::gentoo
sys-devel/automake:       1.14.1-r1::gentoo, 1.15-r2::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            5.3.0::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r1::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.4::gentoo (virtual/os-headers)
sys-libs/glibc:           2.22-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync parallel-fetch preserve-libs protect-owned sandbox sfperms strict test unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j4"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl amd64 berkdb bzip2 cli cracklib crypt cxx dri fortran gdbm iconv ipv6 mmx mmxext modules multilib ncurses nls nptl openmp pam pcre readline seccomp session sqlite sse sse2 ssl tcpd unicode xattr zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4 python3_5" RUBY_TARGETS="ruby22" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

[Comment 1 David Denoncin 2020-08-01 18:23:27 UTC]

Version in tree are stable wrt mentioned arch. Tests pass on my test amd64 machine.