Bug 574958 – sci-mathematics/dataplot-20090821 : /.../ld: dataplot-gl_src.o: undefined reference to symbol 'XResizeWindow'

• Product: Gentoo Linux
• Status: RESOLVED FIXED

[Description Toralf Förster 2016-02-17 13:30:37 UTC]

x86_64-pc-linux-gnu-gfortran  -O2 -pipe -w -fno-range-check -c -o x11src.o x11src.f
x86_64-pc-linux-gnu-gfortran  -O2 -pipe -w -fno-range-check  -Wl,-O1 -Wl,--as-needed -o dataplot dp1_linux.o dp2.o dp3.o dp4.o dp5.o dp6.o dp7.o dp8.o dp9.o dp10.o dp11.o dp12.o dp13.o dp14.o dp15.o dp16.o dp17.o dp18.o dp19.o dp20.o dp21.o dp22.o dp23.o dp24.o dp25.o dp26.o dp27.o dp28.o dp29.o dp30.o dp31.o dp32.o dp33.o dp34.o dp35.o dp36.o dp37.o dp38.o dp39.o dp40.o dp41.o dp42.o dp43.o dp44.o dp45.o dp46.o dpcalc.o dpdds2.o dpdds3.o dpdds.o edinit.o edmai2.o edsear.o edsub.o edwrst.o fit3b.o starpac.o tcdriv_nopc.o aqua_src.o cluster.o compgeom.o optimi.o dataplot-libplot_src.o dataplot-rldp.o main.o  gd_src.o dataplot-gl_src.o   x11src.o -lGL -lGLU  -L/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../../../x86_64-pc-linux-gnu/lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../.. -lgfortran -lm -lquadmath -lreadline -lplot 
/usr/lib/gcc/x86_64-pc-linux-gnu/5.3.0/../../../../x86_64-pc-linux-gnu/bin/ld: dataplot-gl_src.o: undefined reference to symbol 'XResizeWindow'
/usr/lib64/libX11.so.6: error adding symbols: DSO missing from command line
collect2: error: ld returned 1 exit status
Makefile:475: recipe for target 'dataplot' failed


$ cat emerge-info.txt
  -----------------------------------------------------------------

  This is an unstable amd64 chroot image (named amd64-selinux-unstable_20160204-170558) at a hardened host acting as a tinderbox.

  -----------------------------------------------------------------

  make.conf: USE="mmx sse sse2 pax_kernel -cdinstall -oci8 -bindist -aes-ni avx2 cdb cgi compat corefonts custom-cflags -evdev fortran freetds ftp gnuplot gtkstyle gudev imap introspection jadetex javafx -mbox mdnsresponder-compat mikmod mod oci8 ogg opengl png postproc pulseaudio pyqt4 sql sqlite ssh-askpass ssl ssse3 thinkpad -tk ufed video xinetd -xmp xvmc"

  -----------------------------------------------------------------
Portage 2.2.27 (python 3.4.3-final-0, default/linux/amd64/13.0/selinux, gcc-5.3.0, glibc-2.22-r2, 4.3.5-hardened-r2 x86_64)
=================================================================
System uname: Linux-4.3.5-hardened-r2-x86_64-Intel-R-_Core-TM-_i7-3770_CPU_@_3.40GHz-with-gentoo-2.2
KiB Mem:    16164680 total,   3169116 free
KiB Swap:   16777212 total,  16704408 free
Timestamp of repository gentoo: Tue, 16 Feb 2016 23:03:44 +0000
sh bash 4.3_p42-r2
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
app-shells/bash:          4.3_p42-r2::gentoo
dev-java/java-config:     2.2.0::gentoo
dev-lang/perl:            5.22.1::gentoo
dev-lang/python:          2.7.11-r2::gentoo, 3.4.3-r7::gentoo, 3.5.1-r2::gentoo
dev-util/cmake:           3.4.3::gentoo
dev-util/pkgconfig:       0.29::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.20.5::gentoo
sys-apps/sandbox:         2.10-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r1::gentoo
sys-devel/automake:       1.9.6-r4::gentoo, 1.10.3-r2::gentoo, 1.11.6-r2::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.2.4-r1::gentoo, 4.9.3::gentoo, 5.3.0::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r2::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.4::gentoo (virtual/os-headers)
sys-libs/glibc:           2.22-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.de.gentoo.org/gentoo-portage/
    priority: 1

local
    location: /usr/local/portage
    masters: gentoo
    priority: 2

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/entropy /etc/stunnel/stunnel.conf /usr/lib64/tomoyo/conf /usr/share/gnupg/qualified.txt /var/lib/i2pd/certificates"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/games/angband/gamedata/ /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.5/ext-active/ /etc/php/apache2-php7.0/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/var/tmp/distfiles"
EMERGE_DEFAULT_OPTS="--deep --verbose-conflicts --color=n --nospinner --tree --quiet-build --accept-properties=-interactive --accept-restrict=-fetch"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync network-sandbox news parallel-fetch preserve-libs protect-owned sandbox selinux sesandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo rsync://mirror.netcologne.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gor.bytemark.co.uk/gentoo/ rsync://ftp.snt.utwente.nl/gentoo"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="acl amd64 avx2 berkdb bzip2 cdb cgi cli compat corefonts cracklib crypt custom-cflags cxx dri fortran freetds ftp gdbm gnuplot gtkstyle gudev iconv imap introspection ipv6 jadetex javafx mdnsresponder-compat mikmod mmx mmxext mod modules multilib ncurses nls nptl oci8 ogg open_perms opengl openmp pam pax_kernel pcre png postproc pulseaudio pyqt4 readline seccomp selinux session sql sqlite sse sse2 ssh-askpass ssl ssse3 tcpd thinkpad ufed unconfined unicode video xattr xinetd xvmc zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_GB" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="intel i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

[Comment 1 Toralf Förster 2016-02-17 13:30:40 UTC]

Created attachment 425710 [details]
emerge-history.txt

[Comment 2 Toralf Förster 2016-02-17 13:30:42 UTC]

Created attachment 425712 [details]
environment

[Comment 3 Toralf Förster 2016-02-17 13:30:45 UTC]

Created attachment 425714 [details]
sci-mathematics:dataplot-20090821:20160217-010323.log

[Comment 4 Justin Lecher (RETIRED) 2016-02-17 14:06:50 UTC]

commit e64b5d58dddafae9975f26ca43959561aba6f724
Author: Justin Lecher <[e-mail]>
Date:   Wed Feb 17 15:04:25 2016 +0100

    sci-mathematics/dataplot: REQUIRE USE=X for USE=opengl

    Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=574958

    Package-Manager: portage-2.2.27
    Signed-off-by: Justin Lecher <[e-mail]>

    https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e64b5d58dddafae9975f26ca43959561aba6f724