Bug 547730 – dev-lang/elixir-1.0.4: file collision

• Product: Gentoo Linux
• Status: RESOLVED DUPLICATE

[Description Toralf Förster 2015-04-25 18:20:58 UTC]

* Detected file collision(s):
 * 
 * 	/usr/bin/mix
 * 
 * Searching all installed packages for file collisions...
 * 
 * Press Ctrl-C to Stop
 * 
 * sci-biology/phylip-3.696:0::gentoo
 * 	/usr/bin/mix
 * 
 * Package 'net-im/ejabberd-15.03-r1' NOT merged due to file collisions.
 * If necessary, refer to your elog messages for the whole content of the
 * above message.

>>> Failed to install net-im/ejabberd-15.03-r1, Log file:

>>>  '/var/log/portage/net-im:ejabberd-15.03-r1:20150425-174415.log'

 * GNU info directory index is up-to-date.

This is an unstable amd64 chroot image (named amd64-unstable_20150414) at a hardened host acting as a tinderbox.

Portage 2.2.18 (python 2.7.9-final-0, default/linux/amd64/13.0/desktop/kde, gcc-4.9.2, glibc-2.20-r2, 3.19.5-hardened x86_64)
=================================================================
System uname: Linux-3.19.5-hardened-x86_64-Intel-R-_Core-TM-_i7-3770_CPU_@_3.40GHz-with-gentoo-2.2
KiB Mem:    16164756 total,   2718100 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Sat, 25 Apr 2015 10:00:01 +0000
sh bash 4.3_p33-r2
ld GNU ld (Gentoo 2.25 p1.0) 2.25
app-shells/bash:          4.3_p33-r2::gentoo
dev-java/java-config:     2.2.0::gentoo
dev-lang/perl:            5.20.2::gentoo
dev-lang/python:          2.7.9-r2::gentoo, 3.3.5-r1::gentoo, 3.4.3::gentoo
dev-util/cmake:           3.2.1::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.13.11::gentoo
sys-apps/sandbox:         2.6-r1::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r1::gentoo
sys-devel/automake:       1.9.6-r4::gentoo, 1.10.3-r1::gentoo, 1.11.6-r1::gentoo, 1.12.6::gentoo, 1.13.4::gentoo, 1.14.1::gentoo, 1.15::gentoo
sys-devel/binutils:       2.25::gentoo
sys-devel/gcc:            4.8.4::gentoo, 4.9.2::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r1::gentoo
sys-devel/make:           4.1-r1::gentoo
sys-kernel/linux-headers: 4.0::gentoo (virtual/os-headers)
sys-libs/glibc:           2.20-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

local
    location: /usr/local/portage
    masters: gentoo
    priority: 0

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/entropy /opt/openfire/resources/security/ /usr/lib64/tomoyo/conf /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/qpsmtpd/plugins /var/lib/hsqldb /var/rancid/.cloginrc /var/spool/torque"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/games/angband/edit/ /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.5/ext-active/ /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.5/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/var/tmp/distfiles"
EMERGE_DEFAULT_OPTS="--nospinner --tree  --jobs 1"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo rsync://mirror.netcologne.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gor.bytemark.co.uk/gentoo/ rsync://ftp.snt.utwente.nl/gentoo"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi aes-ni alsa amd64 apache2 avx avx2 berkdb bluetooth branding bzip2 cairo cdda cdr cli consolekit corefonts cracklib crypt cups cxx dbus declarative designer dnssec dot dri drmkms dts dvd dvdr ecc emboss encode exif extraengine fam ffmpeg firefox flac fontconfig fortran fpm gd gdbm gif glamor gpm gtk gudev gui iconv icu isag jadetex jpeg kde kipi kvm lapack lcms libkms libnotify libvirtd logrotate mad mbox minizip mmx mmxext mng modules mp3 mp4 mpeg multilib mysql ncurses nls nptl ogg opengl openmp openssl pam pango pax_kernel pcre pcre16 pdf phonon plasma png policykit ppds pwquality python qemu qt3support qt4 readline scrpyt sdl session spell spice sqlite sse sse2 sse4 sse4_1 sse4_2 ssh-askpass ssl ssse3 startup-notification svg tcpd theora thinkpad threads tiff tk tls truetype udev udisks uml unicode upower usb usbredir uxa v4l v4l2 video vorbis wxwidgets x264 xa xcb xcomposite xinerama xkb xml xmp xscreensaver xslt xv xvfb xvid xvmc zenmap zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom  oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en en_GB" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

[Comment 1 Toralf Förster 2015-04-29 11:35:32 UTC]

and today I got 2 more :

* Detected file collision(s):
 * 
 * 	/usr/bin/mix
 * 	/usr/bin/elixir
 * 	/usr/bin/iex
 * 
 * Searching all installed packages for file collisions...
 * 
 * Press Ctrl-C to Stop
 * 
 * dev-lang/elixir-1.0.4:0::gentoo
 * 	/usr/bin/elixir
 * 	/usr/bin/iex
 * 	/usr/bin/mix

[Comment 2 Amadeusz Żołnowski (RETIRED) 2016-06-07 22:48:36 UTC]

ejabberd-16.04 no longer comes with bundled elixir. Therefore any issues with conflicting files apply only to dev-lang/elixir.

[Comment 3 Sergei Trofimovich (RETIRED) 2016-06-24 20:17:37 UTC]

*** This bug has been marked as a duplicate of bug 537514 ***